RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 LIMCH1Q9UPQ0 1083 aa13.95□□□□□ -0.18
RBFOX1-208ENST00000547372 CDC42BPBQ9Y5S2 1711 aa13.95□□□□□ -0.18
RBFOX1-208ENST00000547372 MYOM2P54296 1465 aa13.94□□□□□ -0.18
RBFOX1-208ENST00000547372 FCHSD2O94868 740 aa13.94□□□□□ -0.18
RBFOX1-208ENST00000547372 LARGE1O95461 756 aa13.94□□□□□ -0.18
RBFOX1-208ENST00000547372 CCDC102AQ96A19 550 aa13.94□□□□□ -0.18
RBFOX1-208ENST00000547372 TMC6Q7Z403 805 aa13.94□□□□□ -0.18
RBFOX1-208ENST00000547372 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.94□□□□□ -0.18
RBFOX1-208ENST00000547372 NUTM1Q86Y26 1132 aa13.94□□□□□ -0.18
RBFOX1-208ENST00000547372 REXO1L1PQ8IX06 675 aa13.94□□□□□ -0.18
RBFOX1-208ENST00000547372 SURF6O75683 361 aaKnown RBP13.94□□□□□ -0.18
RBFOX1-208ENST00000547372 CHMLP26374 656 aa13.94□□□□□ -0.18
RBFOX1-208ENST00000547372 PPM1EQ8WY54 764 aa13.94□□□□□ -0.18
RBFOX1-208ENST00000547372 SPG7Q9UQ90 795 aa13.94□□□□□ -0.18
RBFOX1-208ENST00000547372 ATG3Q9NT62 314 aa13.93□□□□□ -0.18
RBFOX1-208ENST00000547372 MTMR6Q9Y217 621 aa13.93□□□□□ -0.18
RBFOX1-208ENST00000547372 PPP2R5AQ15172 486 aa13.93□□□□□ -0.18
RBFOX1-208ENST00000547372 PPP1R13BQ96KQ4 1090 aa13.93□□□□□ -0.18
RBFOX1-208ENST00000547372 PHACTR3Q96KR7 559 aa13.93□□□□□ -0.18
RBFOX1-208ENST00000547372 LRRCC1Q9C099 1032 aa13.93□□□□□ -0.18
RBFOX1-208ENST00000547372 UHRF1BP1LA0JNW5 1464 aa13.93□□□□□ -0.18
RBFOX1-208ENST00000547372 ABCA6Q8N139 1617 aa13.93□□□□□ -0.18
RBFOX1-208ENST00000547372 NEMFO60524 1076 aa13.93□□□□□ -0.18
RBFOX1-208ENST00000547372 TBC1D8O95759 1140 aa13.93□□□□□ -0.18
RBFOX1-208ENST00000547372 NFE2L2Q16236 605 aa13.93□□□□□ -0.18
RBFOX1-208ENST00000547372 PTPN21Q16825 1174 aa13.93□□□□□ -0.18
RBFOX1-208ENST00000547372 WWC2Q6AWC2 1192 aa13.93□□□□□ -0.18
RBFOX1-208ENST00000547372 UNC5CLQ8IV45 518 aa13.93□□□□□ -0.18
RBFOX1-208ENST00000547372 TCEANC2Q96MN5 208 aa13.93□□□□□ -0.18
RBFOX1-208ENST00000547372 CABP1Q9NZU7 370 aa13.93□□□□□ -0.18
RBFOX1-208ENST00000547372 PREX2Q70Z35 1606 aa13.92□□□□□ -0.18
RBFOX1-208ENST00000547372 ATP10DQ9P241 1426 aa13.92□□□□□ -0.18
RBFOX1-208ENST00000547372 KIF2AO00139 706 aaPredicted RBP13.92□□□□□ -0.18
RBFOX1-208ENST00000547372 ZRANB2O95218 330 aaKnown RBP eCLIP13.92□□□□□ -0.18
RBFOX1-208ENST00000547372 IVLP07476 585 aa13.92□□□□□ -0.18
RBFOX1-208ENST00000547372 ZKSCAN1P17029 563 aaPredicted RBP13.92□□□□□ -0.18
RBFOX1-208ENST00000547372 SFPQP23246 707 aaKnown RBP eCLIP13.92□□□□□ -0.18
RBFOX1-208ENST00000547372 CCZ1BP86790 482 aa13.92□□□□□ -0.18
RBFOX1-208ENST00000547372 CCZ1P86791 482 aaPredicted RBP13.92□□□□□ -0.18
RBFOX1-208ENST00000547372 C11orf57Q6ZUT1 292 aaPredicted RBP13.92□□□□□ -0.18
RBFOX1-208ENST00000547372 RUFY3Q7L099 469 aa13.92□□□□□ -0.18
RBFOX1-208ENST00000547372 PDE11AQ9HCR9 933 aa13.92□□□□□ -0.18
RBFOX1-208ENST00000547372 BCCIPQ9P287 314 aaKnown RBP eCLIP13.92□□□□□ -0.18
RBFOX1-208ENST00000547372 CCDC9Q9Y3X0 531 aaKnown RBP13.92□□□□□ -0.18
RBFOX1-208ENST00000547372 KIAA1210Q9ULL0 1709 aa13.92□□□□□ -0.18
RBFOX1-208ENST00000547372 ATP6V1AP38606 617 aa13.92□□□□□ -0.18
RBFOX1-208ENST00000547372 PLPPR3Q6T4P5 718 aa13.92□□□□□ -0.18
RBFOX1-208ENST00000547372 C14orf37Q86TY3 774 aa13.92□□□□□ -0.18
RBFOX1-208ENST00000547372 OSBPL3Q9H4L5 887 aa13.92□□□□□ -0.18
RBFOX1-208ENST00000547372 LIG3P49916 1009 aa13.91□□□□□ -0.18
RBFOX1-208ENST00000547372 TDRD7Q8NHU6 1098 aaKnown RBP13.91□□□□□ -0.18
RBFOX1-208ENST00000547372 IL25Q9H293 177 aa13.91□□□□□ -0.18
RBFOX1-208ENST00000547372 ECM2O94769 699 aaPredicted RBP13.91□□□□□ -0.18
RBFOX1-208ENST00000547372 E4F1Q66K89 784 aaPredicted RBP13.91□□□□□ -0.18
RBFOX1-208ENST00000547372 CC2D1AQ6P1N0 951 aaPredicted RBP13.91□□□□□ -0.18
RBFOX1-208ENST00000547372 TMED8Q6PL24 325 aaPredicted RBP13.91□□□□□ -0.18
RBFOX1-208ENST00000547372 CDC37L1Q7L3B6 337 aa13.91□□□□□ -0.18
RBFOX1-208ENST00000547372 H3BQF6 201 aa13.91□□□□□ -0.18
RBFOX1-208ENST00000547372 GOLIM4O00461 696 aa13.91□□□□□ -0.18
RBFOX1-208ENST00000547372 AOPEPQ8N6M6 819 aa13.91□□□□□ -0.18
RBFOX1-208ENST00000547372 DDX11Q96FC9 970 aa13.91□□□□□ -0.18
RBFOX1-208ENST00000547372 KIF24Q5T7B8 1368 aa13.91□□□□□ -0.18
RBFOX1-208ENST00000547372 RRS1Q15050 365 aaKnown RBP13.9□□□□□ -0.18
RBFOX1-208ENST00000547372 RASEFQ8IZ41 740 aa13.9□□□□□ -0.18
RBFOX1-208ENST00000547372 JAKMIP1Q96N16 626 aaKnown RBP13.9□□□□□ -0.18
RBFOX1-208ENST00000547372 MAP3K4Q9Y6R4 1608 aa13.9□□□□□ -0.18
RBFOX1-208ENST00000547372 MCTP2Q6DN12 878 aa13.9□□□□□ -0.18
RBFOX1-208ENST00000547372 MCM10Q7L590 875 aa13.9□□□□□ -0.18
RBFOX1-208ENST00000547372 EXOC4Q96A65 974 aa13.9□□□□□ -0.18
RBFOX1-208ENST00000547372 N4BP1O75113 896 aaKnown RBP13.9□□□□□ -0.18
RBFOX1-208ENST00000547372 IFIT2P09913 472 aaKnown RBP13.9□□□□□ -0.18
RBFOX1-208ENST00000547372 SF3A1Q15459 793 aaKnown RBP13.9□□□□□ -0.18
RBFOX1-208ENST00000547372 KNDC1Q76NI1 1749 aa13.9□□□□□ -0.18
RBFOX1-208ENST00000547372 PPFIA3O75145 1194 aa13.89□□□□□ -0.19
RBFOX1-208ENST00000547372 GNAI2P04899 355 aa13.89□□□□□ -0.19
RBFOX1-208ENST00000547372 EIF2S2P20042 333 aaKnown RBP13.89□□□□□ -0.19
RBFOX1-208ENST00000547372 HSP90B2PQ58FF3 399 aa13.89□□□□□ -0.19
RBFOX1-208ENST00000547372 TSPYL4Q9UJ04 414 aa13.89□□□□□ -0.19
RBFOX1-208ENST00000547372 MSH6P52701 1360 aa13.89□□□□□ -0.19
RBFOX1-208ENST00000547372 FAM135BQ49AJ0 1406 aa13.89□□□□□ -0.19
RBFOX1-208ENST00000547372 GOLGA8FQ08AF8 430 aa13.89□□□□□ -0.19
RBFOX1-208ENST00000547372 GOLGA8DPQ0D2H9 430 aa13.89□□□□□ -0.19
RBFOX1-208ENST00000547372 CCDC30Q5VVM6 783 aa13.89□□□□□ -0.19
RBFOX1-208ENST00000547372 CARD10Q9BWT7 1032 aa13.89□□□□□ -0.19
RBFOX1-208ENST00000547372 PARD6BQ9BYG5 372 aa13.89□□□□□ -0.19
RBFOX1-208ENST00000547372 FAN1Q9Y2M0 1017 aa13.89□□□□□ -0.19
RBFOX1-208ENST00000547372 RPAINQ86UA6 219 aa13.89□□□□□ -0.19
RBFOX1-208ENST00000547372 SDF4Q9BRK5 362 aa13.89□□□□□ -0.19
RBFOX1-208ENST00000547372 EMILIN1Q9Y6C2 1016 aa13.89□□□□□ -0.19
RBFOX1-208ENST00000547372 FYB1O15117 783 aa13.88□□□□□ -0.19
RBFOX1-208ENST00000547372 HSPA4P34932 840 aa13.88□□□□□ -0.19
RBFOX1-208ENST00000547372 DDX19AQ9NUU7 478 aaKnown RBP13.88□□□□□ -0.19
RBFOX1-208ENST00000547372 PLEKHG2Q9H7P9 1386 aa13.88□□□□□ -0.19
RBFOX1-208ENST00000547372 GNG11P61952 73 aa13.88□□□□□ -0.19
RBFOX1-208ENST00000547372 ETF1P62495 437 aaKnown RBP13.88□□□□□ -0.19
RBFOX1-208ENST00000547372 PRAM1Q96QH2 718 aa13.88□□□□□ -0.19
RBFOX1-208ENST00000547372 UTP14AQ9BVJ6 771 aaKnown RBP13.88□□□□□ -0.19
RBFOX1-208ENST00000547372 RAI14Q9P0K7 980 aa13.88□□□□□ -0.19
RBFOX1-208ENST00000547372 COL3A1P02461 1466 aaPredicted RBP13.88□□□□□ -0.19
RBFOX1-208ENST00000547372 BIN1O00499 593 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms