RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 EMILIN1Q9Y6C2 1016 aa12.67□□□□□ -0.38
NPAS3-205ENST00000547068 SOS2Q07890 1332 aaPredicted RBP12.67□□□□□ -0.38
NPAS3-205ENST00000547068 CCDC171Q6TFL3 1326 aa12.67□□□□□ -0.38
NPAS3-205ENST00000547068 RAD50Q92878 1312 aa12.67□□□□□ -0.38
NPAS3-205ENST00000547068 MAP2P11137 1827 aaKnown RBP12.66□□□□□ -0.38
NPAS3-205ENST00000547068 GNAI2P04899 355 aa12.66□□□□□ -0.38
NPAS3-205ENST00000547068 SLC4A2P04920 1241 aa12.66□□□□□ -0.38
NPAS3-205ENST00000547068 CCDC83Q8IWF9 413 aa12.66□□□□□ -0.38
NPAS3-205ENST00000547068 NOL10Q9BSC4 688 aaKnown RBP12.66□□□□□ -0.38
NPAS3-205ENST00000547068 LIG1P18858 919 aa12.66□□□□□ -0.38
NPAS3-205ENST00000547068 SLFNL1Q499Z3 407 aa12.66□□□□□ -0.38
NPAS3-205ENST00000547068 STAP2Q9UGK3 403 aa12.66□□□□□ -0.38
NPAS3-205ENST00000547068 USP31Q70CQ4 1352 aa12.66□□□□□ -0.38
NPAS3-205ENST00000547068 DTNBO60941 627 aa12.65□□□□□ -0.38
NPAS3-205ENST00000547068 KRT85P78386 507 aa12.65□□□□□ -0.38
NPAS3-205ENST00000547068 CCDC144BQ3MJ40 725 aa12.65□□□□□ -0.38
NPAS3-205ENST00000547068 TTC6Q86TZ1 520 aa12.65□□□□□ -0.38
NPAS3-205ENST00000547068 CCDC144CPQ8IYA2 1237 aa12.65□□□□□ -0.38
NPAS3-205ENST00000547068 TDRD7Q8NHU6 1098 aaKnown RBP12.65□□□□□ -0.38
NPAS3-205ENST00000547068 TSPYL1Q9H0U9 437 aa12.65□□□□□ -0.38
NPAS3-205ENST00000547068 USP27XA6NNY8 438 aa12.65□□□□□ -0.38
NPAS3-205ENST00000547068 LARGE1O95461 756 aa12.65□□□□□ -0.38
NPAS3-205ENST00000547068 CCT4P50991 539 aaKnown RBP12.65□□□□□ -0.38
NPAS3-205ENST00000547068 LRRC8AQ8IWT6 810 aa12.65□□□□□ -0.38
NPAS3-205ENST00000547068 LRRC59Q96AG4 307 aaKnown RBP12.65□□□□□ -0.38
NPAS3-205ENST00000547068 KIF1BPQ96EK5 621 aa12.65□□□□□ -0.38
NPAS3-205ENST00000547068 SPATA31A3Q5VYP0 1347 aa12.65□□□□□ -0.38
NPAS3-205ENST00000547068 PXDNQ92626 1479 aa12.64□□□□□ -0.39
NPAS3-205ENST00000547068 F6X3S4 739 aa12.64□□□□□ -0.39
NPAS3-205ENST00000547068 CYP2C19P33261 490 aa12.64□□□□□ -0.39
NPAS3-205ENST00000547068 ZNF165P49910 485 aa12.64□□□□□ -0.39
NPAS3-205ENST00000547068 RASEFQ8IZ41 740 aa12.64□□□□□ -0.39
NPAS3-205ENST00000547068 TRERF1Q96PN7 1200 aa12.64□□□□□ -0.39
NPAS3-205ENST00000547068 DACT1Q9NYF0 836 aa12.64□□□□□ -0.39
NPAS3-205ENST00000547068 ARHGEF10O15013 1369 aa12.64□□□□□ -0.39
NPAS3-205ENST00000547068 GOLGA6L4A6NEF3 574 aa12.64□□□□□ -0.39
NPAS3-205ENST00000547068 BMS1Q14692 1282 aaKnown RBP12.64□□□□□ -0.39
NPAS3-205ENST00000547068 NYAP1Q6ZVC0 841 aa12.64□□□□□ -0.39
NPAS3-205ENST00000547068 TRIM34Q9BYJ4 488 aa12.64□□□□□ -0.39
NPAS3-205ENST00000547068 NHSL1Q5SYE7 1610 aa12.64□□□□□ -0.39
NPAS3-205ENST00000547068 TRPM3Q9HCF6 1732 aaPredicted RBP12.64□□□□□ -0.39
NPAS3-205ENST00000547068 TNS3Q68CZ2 1445 aa12.64□□□□□ -0.39
NPAS3-205ENST00000547068 PIK3C2AO00443 1686 aa12.63□□□□□ -0.39
NPAS3-205ENST00000547068 SOX12O15370 315 aa12.63□□□□□ -0.39
NPAS3-205ENST00000547068 SLU7O95391 586 aaKnown RBP12.63□□□□□ -0.39
NPAS3-205ENST00000547068 CPA1P15085 419 aa12.63□□□□□ -0.39
NPAS3-205ENST00000547068 CASTP20810 708 aaKnown RBP12.63□□□□□ -0.39
NPAS3-205ENST00000547068 HNRNPH2P55795 449 aaKnown RBP12.63□□□□□ -0.39
NPAS3-205ENST00000547068 KCNH5Q8NCM2 988 aa12.63□□□□□ -0.39
NPAS3-205ENST00000547068 ZNF446Q9NWS9 450 aa12.63□□□□□ -0.39
NPAS3-205ENST00000547068 CHL1O00533 1208 aa12.63□□□□□ -0.39
NPAS3-205ENST00000547068 NPHP1O15259 732 aa12.63□□□□□ -0.39
NPAS3-205ENST00000547068 SGSM2O43147 1006 aa12.63□□□□□ -0.39
NPAS3-205ENST00000547068 NEMFO60524 1076 aa12.63□□□□□ -0.39
NPAS3-205ENST00000547068 CDC25BP30305 580 aa12.63□□□□□ -0.39
NPAS3-205ENST00000547068 RNF20Q5VTR2 975 aa12.63□□□□□ -0.39
NPAS3-205ENST00000547068 HYPKQ9NX55 129 aa12.63□□□□□ -0.39
NPAS3-205ENST00000547068 OVOS2A0A0J9YW53 1432 aa12.63□□□□□ -0.39
NPAS3-205ENST00000547068 OVOS2Q6IE36 1432 aa12.63□□□□□ -0.39
NPAS3-205ENST00000547068 PNMA6EA0A0J9YXQ4 647 aa12.62□□□□□ -0.39
NPAS3-205ENST00000547068 MAP4K4O95819 1239 aaPredicted RBP12.62□□□□□ -0.39
NPAS3-205ENST00000547068 DNAJC25Q9H1X3 360 aa12.62□□□□□ -0.39
NPAS3-205ENST00000547068 ELP1O95163 1332 aa12.62□□□□□ -0.39
NPAS3-205ENST00000547068 SKILP12757 684 aa12.62□□□□□ -0.39
NPAS3-205ENST00000547068 AOX1Q06278 1338 aa12.62□□□□□ -0.39
NPAS3-205ENST00000547068 LSG1Q9H089 658 aaKnown RBP12.62□□□□□ -0.39
NPAS3-205ENST00000547068 DDX19AQ9NUU7 478 aaKnown RBP12.62□□□□□ -0.39
NPAS3-205ENST00000547068 TRMT1Q9NXH9 659 aaKnown RBP12.62□□□□□ -0.39
NPAS3-205ENST00000547068 CDK12Q9NYV4 1490 aaPredicted RBP12.61□□□□□ -0.39
NPAS3-205ENST00000547068 HTATSF1O43719 755 aaKnown RBP12.61□□□□□ -0.39
NPAS3-205ENST00000547068 ATP8B2P98198 1209 aa12.61□□□□□ -0.39
NPAS3-205ENST00000547068 ARID5BQ14865 1188 aa12.61□□□□□ -0.39
NPAS3-205ENST00000547068 TAF7LQ5H9L4 462 aa12.61□□□□□ -0.39
NPAS3-205ENST00000547068 LARP1BQ659C4 914 aaKnown RBP12.61□□□□□ -0.39
NPAS3-205ENST00000547068 FERMT3Q86UX7 667 aa12.61□□□□□ -0.39
NPAS3-205ENST00000547068 GTF3C6Q969F1 213 aa12.61□□□□□ -0.39
NPAS3-205ENST00000547068 ZSCAN31Q96LW9 406 aaPredicted RBP12.61□□□□□ -0.39
NPAS3-205ENST00000547068 SH2B1Q9NRF2 756 aaPredicted RBP12.61□□□□□ -0.39
NPAS3-205ENST00000547068 AHDC1Q5TGY3 1603 aaPredicted RBP12.61□□□□□ -0.39
NPAS3-205ENST00000547068 AATKQ6ZMQ8 1374 aa12.61□□□□□ -0.39
NPAS3-205ENST00000547068 FAM173BQ6P4H8 233 aa12.61□□□□□ -0.39
NPAS3-205ENST00000547068 G2E3Q7L622 706 aa12.61□□□□□ -0.39
NPAS3-205ENST00000547068 CLSTN2Q9H4D0 955 aa12.61□□□□□ -0.39
NPAS3-205ENST00000547068 IL1RAPL2Q9NP60 686 aa12.61□□□□□ -0.39
NPAS3-205ENST00000547068 PDRG1Q9NUG6 133 aa12.61□□□□□ -0.39
NPAS3-205ENST00000547068 ALS2Q96Q42 1657 aa12.61□□□□□ -0.39
NPAS3-205ENST00000547068 ERBB3P21860 1342 aa12.6□□□□□ -0.39
NPAS3-205ENST00000547068 GOLGA6L19H0YKK7 550 aa12.6□□□□□ -0.39
NPAS3-205ENST00000547068 GCP02774 474 aa12.6□□□□□ -0.39
NPAS3-205ENST00000547068 RBM43Q6ZSC3 357 aaKnown RBP12.6□□□□□ -0.39
NPAS3-205ENST00000547068 MCM10Q7L590 875 aa12.6□□□□□ -0.39
NPAS3-205ENST00000547068 FEZ2Q9UHY8 353 aaPredicted RBP12.6□□□□□ -0.39
NPAS3-205ENST00000547068 RRS1Q15050 365 aaKnown RBP12.6□□□□□ -0.39
NPAS3-205ENST00000547068 VPS53Q5VIR6 699 aa12.6□□□□□ -0.39
NPAS3-205ENST00000547068 NUTM1Q86Y26 1132 aa12.6□□□□□ -0.39
NPAS3-205ENST00000547068 SPATA32Q96LK8 384 aa12.6□□□□□ -0.39
NPAS3-205ENST00000547068 CHMP4AQ9BY43 222 aa12.6□□□□□ -0.39
NPAS3-205ENST00000547068 SCAND2PQ9GZW5 306 aaPredicted RBP12.6□□□□□ -0.39
NPAS3-205ENST00000547068 PHLPP1O60346 1717 aa12.6□□□□□ -0.39
NPAS3-205ENST00000547068 GNAI3P08754 354 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms