RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 GTF2E1P29083 439 aaPredicted RBP12.47□□□□□ -0.41
SSH1-205ENST00000546812 CRY2Q49AN0 593 aa12.47□□□□□ -0.41
SSH1-205ENST00000546812 AMER1Q5JTC6 1135 aaPredicted RBP12.47□□□□□ -0.41
SSH1-205ENST00000546812 LARGE2Q8N3Y3 721 aa12.47□□□□□ -0.41
SSH1-205ENST00000546812 CIAPIN1Q6FI81 312 aa12.46□□□□□ -0.41
SSH1-205ENST00000546812 ADARB2Q9NS39 739 aaKnown RBP12.46□□□□□ -0.41
SSH1-205ENST00000546812 PRAMEF22A3QJZ6 481 aa12.45□□□□□ -0.42
SSH1-205ENST00000546812 SNRPA1P09661 255 aaKnown RBP12.45□□□□□ -0.42
SSH1-205ENST00000546812 HOXA10P31260 410 aaPredicted RBP12.45□□□□□ -0.42
SSH1-205ENST00000546812 EIF4G2P78344 907 aaKnown RBP eCLIP12.45□□□□□ -0.42
SSH1-205ENST00000546812 GPRC5DQ9NZD1 345 aa12.45□□□□□ -0.42
SSH1-205ENST00000546812 PGAP2Q9UHJ9 254 aa12.45□□□□□ -0.42
SSH1-205ENST00000546812 LTBP1Q14766 1721 aa12.45□□□□□ -0.42
SSH1-205ENST00000546812 COL4A5P29400 1685 aa12.45□□□□□ -0.42
SSH1-205ENST00000546812 CEMIPQ8WUJ3 1361 aa12.44□□□□□ -0.42
SSH1-205ENST00000546812 NBPF26B4DH59 902 aa12.44□□□□□ -0.42
SSH1-205ENST00000546812 HSPA5P11021 654 aaKnown RBP12.44□□□□□ -0.42
SSH1-205ENST00000546812 NOGQ13253 232 aa12.44□□□□□ -0.42
SSH1-205ENST00000546812 HLFQ16534 295 aa12.44□□□□□ -0.42
SSH1-205ENST00000546812 NBPF10Q6P3W6 841 aaKnown RBP12.44□□□□□ -0.42
SSH1-205ENST00000546812 NIM1KQ8IY84 436 aa12.44□□□□□ -0.42
SSH1-205ENST00000546812 NBPF15Q8N660 670 aa12.44□□□□□ -0.42
SSH1-205ENST00000546812 GLIS2Q9BZE0 524 aaPredicted RBP12.44□□□□□ -0.42
SSH1-205ENST00000546812 CACNA1SQ13698 1873 aa12.44□□□□□ -0.42
SSH1-205ENST00000546812 RPGRQ92834 1020 aaKnown RBP12.43□□□□□ -0.42
SSH1-205ENST00000546812 NYXQ9GZU5 481 aa12.43□□□□□ -0.42
SSH1-205ENST00000546812 KIF7Q2M1P5 1343 aa12.42□□□□□ -0.42
SSH1-205ENST00000546812 SOX10P56693 466 aa12.42□□□□□ -0.42
SSH1-205ENST00000546812 PRPF38BQ5VTL8 546 aaKnown RBP12.42□□□□□ -0.42
SSH1-205ENST00000546812 NUTM1Q86Y26 1132 aa12.42□□□□□ -0.42
SSH1-205ENST00000546812 ZC3H15Q8WU90 426 aaKnown RBP12.42□□□□□ -0.42
SSH1-205ENST00000546812 ZIC5Q96T25 663 aa12.42□□□□□ -0.42
SSH1-205ENST00000546812 VPS33BQ9H267 617 aa12.42□□□□□ -0.42
SSH1-205ENST00000546812 U2SURPO15042 1029 aaKnown RBP12.41□□□□□ -0.42
SSH1-205ENST00000546812 PPIP5K2O43314 1243 aa12.41□□□□□ -0.42
SSH1-205ENST00000546812 GMPSP49915 693 aaPredicted RBP12.41□□□□□ -0.42
SSH1-205ENST00000546812 CXCL9Q07325 125 aa12.41□□□□□ -0.42
SSH1-205ENST00000546812 CDC37L1Q7L3B6 337 aa12.41□□□□□ -0.42
SSH1-205ENST00000546812 CRAMP1Q96RY5 1269 aa12.41□□□□□ -0.42
SSH1-205ENST00000546812 ZNF408Q9H9D4 720 aa12.41□□□□□ -0.42
SSH1-205ENST00000546812 ZNRF3Q9ULT6 936 aa12.41□□□□□ -0.42
SSH1-205ENST00000546812 CASP8AP2Q9UKL3 1982 aa12.41□□□□□ -0.42
SSH1-205ENST00000546812 ABCC12Q96J65 1359 aa12.41□□□□□ -0.42
SSH1-205ENST00000546812 NPC1L1Q9UHC9 1359 aa12.41□□□□□ -0.42
SSH1-205ENST00000546812 BCORQ6W2J9 1755 aa12.41□□□□□ -0.42
SSH1-205ENST00000546812 PPEF1O14829 653 aaPredicted RBP12.4□□□□□ -0.42
SSH1-205ENST00000546812 HIRAP54198 1017 aaPredicted RBP12.4□□□□□ -0.42
SSH1-205ENST00000546812 AOC3Q16853 763 aa12.4□□□□□ -0.42
SSH1-205ENST00000546812 SLC51AQ86UW1 340 aa12.4□□□□□ -0.42
SSH1-205ENST00000546812 RBM17Q96I25 401 aaKnown RBP12.4□□□□□ -0.42
SSH1-205ENST00000546812 PHACTR3Q96KR7 559 aa12.4□□□□□ -0.42
SSH1-205ENST00000546812 SAGE1Q9NXZ1 904 aa12.4□□□□□ -0.42
SSH1-205ENST00000546812 ERVV-1B6SEH8 477 aa12.39□□□□□ -0.43
SSH1-205ENST00000546812 TCERG1O14776 1098 aaKnown RBP12.39□□□□□ -0.43
SSH1-205ENST00000546812 HUNKP57058 714 aa12.39□□□□□ -0.43
SSH1-205ENST00000546812 TMX4Q9H1E5 349 aaPredicted RBP12.39□□□□□ -0.43
SSH1-205ENST00000546812 CDHR2Q9BYE9 1310 aa12.38□□□□□ -0.43
SSH1-205ENST00000546812 RTFDC1Q9BY42 306 aaPredicted RBP12.38□□□□□ -0.43
SSH1-205ENST00000546812 ATP6V0A2Q9Y487 856 aa12.38□□□□□ -0.43
SSH1-205ENST00000546812 TRPM7Q96QT4 1865 aa12.38□□□□□ -0.43
SSH1-205ENST00000546812 RIC1Q4ADV7 1423 aa12.37□□□□□ -0.43
SSH1-205ENST00000546812 FAM155AB1AL88 458 aaPredicted RBP12.37□□□□□ -0.43
SSH1-205ENST00000546812 TNIP1Q15025 636 aa12.37□□□□□ -0.43
SSH1-205ENST00000546812 RGMBQ6NW40 437 aa12.37□□□□□ -0.43
SSH1-205ENST00000546812 USP48Q86UV5 1035 aa12.37□□□□□ -0.43
SSH1-205ENST00000546812 SUPT20HQ8NEM7 779 aa12.37□□□□□ -0.43
SSH1-205ENST00000546812 CCDC102AQ96A19 550 aa12.37□□□□□ -0.43
SSH1-205ENST00000546812 BCL2L13Q9BXK5 485 aa12.37□□□□□ -0.43
SSH1-205ENST00000546812 SIPA1L3O60292 1781 aaPredicted RBP12.36□□□□□ -0.43
SSH1-205ENST00000546812 PER1O15534 1290 aaPredicted RBP12.36□□□□□ -0.43
SSH1-205ENST00000546812 PRKAR2BP31323 418 aa12.36□□□□□ -0.43
SSH1-205ENST00000546812 KIF23Q02241 960 aaPredicted RBP12.36□□□□□ -0.43
SSH1-205ENST00000546812 CC2D1BQ5T0F9 858 aaKnown RBP12.36□□□□□ -0.43
SSH1-205ENST00000546812 SUSD4Q5VX71 490 aa12.36□□□□□ -0.43
SSH1-205ENST00000546812 C3orf67Q6ZVT6 689 aa12.36□□□□□ -0.43
SSH1-205ENST00000546812 MCM10Q7L590 875 aa12.36□□□□□ -0.43
SSH1-205ENST00000546812 TRPM4Q8TD43 1214 aa12.36□□□□□ -0.43
SSH1-205ENST00000546812 RTF1Q92541 710 aaKnown RBP12.36□□□□□ -0.43
SSH1-205ENST00000546812 RNF186Q9NXI6 227 aa12.36□□□□□ -0.43
SSH1-205ENST00000546812 CNOT7Q9UIV1 285 aaKnown RBP12.36□□□□□ -0.43
SSH1-205ENST00000546812 MAP3K15Q6ZN16 1313 aa12.36□□□□□ -0.43
SSH1-205ENST00000546812 IBTKQ9P2D0 1353 aaPredicted RBP12.35□□□□□ -0.43
SSH1-205ENST00000546812 H7C1D1 291 aa12.35□□□□□ -0.43
SSH1-205ENST00000546812 TRPA1O75762 1119 aa12.35□□□□□ -0.43
SSH1-205ENST00000546812 RAD17O75943 681 aa12.35□□□□□ -0.43
SSH1-205ENST00000546812 GPTP24298 496 aa12.35□□□□□ -0.43
SSH1-205ENST00000546812 DLK2Q6UY11 383 aa12.35□□□□□ -0.43
SSH1-205ENST00000546812 CTU1Q7Z7A3 348 aaKnown RBP12.35□□□□□ -0.43
SSH1-205ENST00000546812 NGEFQ8N5V2 710 aa12.35□□□□□ -0.43
SSH1-205ENST00000546812 UBN2Q6ZU65 1347 aa12.35□□□□□ -0.43
SSH1-205ENST00000546812 COL3A1P02461 1466 aaPredicted RBP12.34□□□□□ -0.43
SSH1-205ENST00000546812 KIAA2012Q0VF49 1180 aa12.34□□□□□ -0.43
SSH1-205ENST00000546812 DPP8Q6V1X1 898 aaPredicted RBP12.34□□□□□ -0.43
SSH1-205ENST00000546812 KIF6Q6ZMV9 814 aa12.34□□□□□ -0.43
SSH1-205ENST00000546812 ZNF34Q8IZ26 560 aa12.34□□□□□ -0.43
SSH1-205ENST00000546812 C2orf69Q8N8R5 385 aa12.34□□□□□ -0.43
SSH1-205ENST00000546812 NLRP3Q96P20 1036 aa12.34□□□□□ -0.43
SSH1-205ENST00000546812 RSPH6AQ9H0K4 717 aa12.34□□□□□ -0.43
SSH1-205ENST00000546812 GBA2Q9HCG7 927 aaPredicted RBP12.34□□□□□ -0.43
SSH1-205ENST00000546812 SHTN1A0MZ66 631 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms