RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 UBR2Q8IWV8 1755 aa17.51■□□□□ 0.39
RAB5B-203ENST00000546810 APAF1O14727 1248 aa17.5■□□□□ 0.39
RAB5B-203ENST00000546810 IARSP41252 1262 aaKnown RBP17.5■□□□□ 0.39
RAB5B-203ENST00000546810 FMR1Q06787 632 aaKnown RBP eCLIP17.5■□□□□ 0.39
RAB5B-203ENST00000546810 OLFM4Q6UX06 510 aa17.5■□□□□ 0.39
RAB5B-203ENST00000546810 MCM10Q7L590 875 aa17.5■□□□□ 0.39
RAB5B-203ENST00000546810 ZNF496Q96IT1 587 aaPredicted RBP17.5■□□□□ 0.39
RAB5B-203ENST00000546810 RRP7AQ9Y3A4 280 aaKnown RBP17.5■□□□□ 0.39
RAB5B-203ENST00000546810 CEMIPQ8WUJ3 1361 aa17.5■□□□□ 0.39
RAB5B-203ENST00000546810 HEG1Q9ULI3 1381 aa17.5■□□□□ 0.39
RAB5B-203ENST00000546810 NBPF5PQ86XG9 351 aaPredicted RBP17.49■□□□□ 0.39
RAB5B-203ENST00000546810 A1BGP04217 495 aa17.48■□□□□ 0.39
RAB5B-203ENST00000546810 LMOD1P29536 600 aaPredicted RBP17.48■□□□□ 0.39
RAB5B-203ENST00000546810 MAP2K2P36507 400 aa17.48■□□□□ 0.39
RAB5B-203ENST00000546810 DCTN1Q14203 1278 aa17.48■□□□□ 0.39
RAB5B-203ENST00000546810 DZIP3Q86Y13 1208 aaKnown RBP17.48■□□□□ 0.39
RAB5B-203ENST00000546810 SYNE4Q8N205 404 aa17.48■□□□□ 0.39
RAB5B-203ENST00000546810 CA12O43570 354 aa17.47■□□□□ 0.39
RAB5B-203ENST00000546810 AOC2O75106 756 aa17.47■□□□□ 0.39
RAB5B-203ENST00000546810 CST9Q5W186 159 aa17.47■□□□□ 0.39
RAB5B-203ENST00000546810 ZNF790Q6PG37 636 aa17.47■□□□□ 0.39
RAB5B-203ENST00000546810 JDP2Q8WYK2 163 aa17.47■□□□□ 0.39
RAB5B-203ENST00000546810 GJA3Q9Y6H8 435 aa17.47■□□□□ 0.39
RAB5B-203ENST00000546810 TLL2Q9Y6L7 1015 aa17.47■□□□□ 0.39
RAB5B-203ENST00000546810 KLRG2A4D1S0 409 aaPredicted RBP17.46■□□□□ 0.39
RAB5B-203ENST00000546810 BTBD11A6QL63 1104 aa17.46■□□□□ 0.39
RAB5B-203ENST00000546810 EIF6P56537 245 aaKnown RBP17.46■□□□□ 0.39
RAB5B-203ENST00000546810 CALD1Q05682 793 aaKnown RBP17.46■□□□□ 0.39
RAB5B-203ENST00000546810 TAF7Q15545 349 aaPredicted RBP17.46■□□□□ 0.39
RAB5B-203ENST00000546810 NCBP3Q53F19 620 aaKnown RBP17.46■□□□□ 0.39
RAB5B-203ENST00000546810 TRAF5O00463 557 aa17.45■□□□□ 0.38
RAB5B-203ENST00000546810 NGEFQ8N5V2 710 aa17.45■□□□□ 0.38
RAB5B-203ENST00000546810 LTBP1Q14766 1721 aa17.44■□□□□ 0.38
RAB5B-203ENST00000546810 EPS15P42566 896 aa17.44■□□□□ 0.38
RAB5B-203ENST00000546810 DGKZQ13574 1117 aa17.44■□□□□ 0.38
RAB5B-203ENST00000546810 CLEC4GQ6UXB4 293 aa17.44■□□□□ 0.38
RAB5B-203ENST00000546810 PSMD1Q99460 953 aa17.44■□□□□ 0.38
RAB5B-203ENST00000546810 TRIM35Q9UPQ4 493 aa17.44■□□□□ 0.38
RAB5B-203ENST00000546810 ALDH1B1P30837 517 aa17.43■□□□□ 0.38
RAB5B-203ENST00000546810 SCNN1DP51172 638 aa17.43■□□□□ 0.38
RAB5B-203ENST00000546810 TPTE2Q6XPS3 522 aa17.43■□□□□ 0.38
RAB5B-203ENST00000546810 USP50Q70EL3 339 aaPredicted RBP17.43■□□□□ 0.38
RAB5B-203ENST00000546810 FMNL2Q96PY5 1086 aa17.43■□□□□ 0.38
RAB5B-203ENST00000546810 CCDC27Q2M243 656 aa17.42■□□□□ 0.38
RAB5B-203ENST00000546810 THUMPD2Q9BTF0 503 aaKnown RBP17.42■□□□□ 0.38
RAB5B-203ENST00000546810 BABAM1Q9NWV8 329 aa17.42■□□□□ 0.38
RAB5B-203ENST00000546810 ZNF652Q9Y2D9 606 aa17.42■□□□□ 0.38
RAB5B-203ENST00000546810 BCORQ6W2J9 1755 aa17.42■□□□□ 0.38
RAB5B-203ENST00000546810 BRPF1P55201 1214 aaPredicted RBP17.41■□□□□ 0.38
RAB5B-203ENST00000546810 SAPCD2Q86UD0 394 aa17.41■□□□□ 0.38
RAB5B-203ENST00000546810 SNED1Q8TER0 1413 aa17.4■□□□□ 0.38
RAB5B-203ENST00000546810 PIP4K2AP48426 406 aaPredicted RBP17.4■□□□□ 0.38
RAB5B-203ENST00000546810 FAM177BA6PVY3 158 aa17.39■□□□□ 0.37
RAB5B-203ENST00000546810 TSPYL4Q9UJ04 414 aa17.39■□□□□ 0.37
RAB5B-203ENST00000546810 NIP7Q9Y221 180 aaKnown RBP eCLIP17.39■□□□□ 0.37
RAB5B-203ENST00000546810 COL4A5P29400 1685 aa17.39■□□□□ 0.37
RAB5B-203ENST00000546810 TRPM7Q96QT4 1865 aa17.38■□□□□ 0.37
RAB5B-203ENST00000546810 CELF2O95319 508 aaKnown RBP17.38■□□□□ 0.37
RAB5B-203ENST00000546810 CC2D2BQ6DHV5 1058 aa17.38■□□□□ 0.37
RAB5B-203ENST00000546810 LARGE2Q8N3Y3 721 aa17.38■□□□□ 0.37
RAB5B-203ENST00000546810 HHIPL1Q96JK4 782 aa17.38■□□□□ 0.37
RAB5B-203ENST00000546810 SALL2Q9Y467 1007 aaPredicted RBP17.38■□□□□ 0.37
RAB5B-203ENST00000546810 LAS1LQ9Y4W2 734 aaKnown RBP17.38■□□□□ 0.37
RAB5B-203ENST00000546810 USP16Q9Y5T5 823 aa17.38■□□□□ 0.37
RAB5B-203ENST00000546810 CIAPIN1Q6FI81 312 aa17.37■□□□□ 0.37
RAB5B-203ENST00000546810 WWC1Q8IX03 1113 aa17.37■□□□□ 0.37
RAB5B-203ENST00000546810 MIS18AQ9NYP9 233 aa17.37■□□□□ 0.37
RAB5B-203ENST00000546810 CASP8AP2Q9UKL3 1982 aa17.37■□□□□ 0.37
RAB5B-203ENST00000546810 PDE4DIPQ5VU43 2346 aa17.36■□□□□ 0.37
RAB5B-203ENST00000546810 TNRC18O15417 2968 aaPredicted RBP17.36■□□□□ 0.37
RAB5B-203ENST00000546810 KCNQ3O43525 872 aa17.36■□□□□ 0.37
RAB5B-203ENST00000546810 GTF2E1P29083 439 aaPredicted RBP17.36■□□□□ 0.37
RAB5B-203ENST00000546810 GNAI1P63096 354 aa17.36■□□□□ 0.37
RAB5B-203ENST00000546810 ADARB2Q9NS39 739 aaKnown RBP17.36■□□□□ 0.37
RAB5B-203ENST00000546810 IFT57Q9NWB7 429 aa17.36■□□□□ 0.37
RAB5B-203ENST00000546810 RGL2O15211 777 aa17.35■□□□□ 0.37
RAB5B-203ENST00000546810 SOX10P56693 466 aa17.35■□□□□ 0.37
RAB5B-203ENST00000546810 WDR63Q8IWG1 891 aa17.35■□□□□ 0.37
RAB5B-203ENST00000546810 CHL1O00533 1208 aa17.34■□□□□ 0.37
RAB5B-203ENST00000546810 IL16Q14005 1332 aa17.34■□□□□ 0.37
RAB5B-203ENST00000546810 CRY2Q49AN0 593 aa17.34■□□□□ 0.37
RAB5B-203ENST00000546810 GRIPAP1Q4V328 841 aa17.34■□□□□ 0.37
RAB5B-203ENST00000546810 PRPF38BQ5VTL8 546 aaKnown RBP17.34■□□□□ 0.37
RAB5B-203ENST00000546810 NIM1KQ8IY84 436 aa17.34■□□□□ 0.37
RAB5B-203ENST00000546810 DLG5Q8TDM6 1919 aa17.34■□□□□ 0.37
RAB5B-203ENST00000546810 GLIS2Q9BZE0 524 aaPredicted RBP17.34■□□□□ 0.37
RAB5B-203ENST00000546810 GPRC5DQ9NZD1 345 aa17.34■□□□□ 0.37
RAB5B-203ENST00000546810 PRAMEF22A3QJZ6 481 aa17.33■□□□□ 0.36
RAB5B-203ENST00000546810 SNRPA1P09661 255 aaKnown RBP17.33■□□□□ 0.36
RAB5B-203ENST00000546810 NOGQ13253 232 aa17.33■□□□□ 0.36
RAB5B-203ENST00000546810 ZNF408Q9H9D4 720 aa17.33■□□□□ 0.36
RAB5B-203ENST00000546810 SIPA1L3O60292 1781 aaPredicted RBP17.33■□□□□ 0.36
RAB5B-203ENST00000546810 EIF4A1P60842 406 aaKnown RBP17.32■□□□□ 0.36
RAB5B-203ENST00000546810 ABCC12Q96J65 1359 aa17.31■□□□□ 0.36
RAB5B-203ENST00000546810 ZNF853P0CG23 659 aa17.31■□□□□ 0.36
RAB5B-203ENST00000546810 HLFQ16534 295 aa17.31■□□□□ 0.36
RAB5B-203ENST00000546810 RPGRQ92834 1020 aaKnown RBP17.31■□□□□ 0.36
RAB5B-203ENST00000546810 ZIC5Q96T25 663 aa17.31■□□□□ 0.36
RAB5B-203ENST00000546810 NBPF26B4DH59 902 aa17.3■□□□□ 0.36
RAB5B-203ENST00000546810 PPIP5K2O43314 1243 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 1302.9 ms