RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 CLGNO14967 610 aa14.76□□□□□ -0.05
PTCH1-212ENST00000546744 GJB2P29033 226 aa14.76□□□□□ -0.05
PTCH1-212ENST00000546744 GBP6Q6ZN66 633 aa14.76□□□□□ -0.05
PTCH1-212ENST00000546744 B4GALNT4Q76KP1 1039 aa14.76□□□□□ -0.05
PTCH1-212ENST00000546744 CCDC50Q8IVM0 306 aa14.76□□□□□ -0.05
PTCH1-212ENST00000546744 DDX12PQ92771 950 aa14.76□□□□□ -0.05
PTCH1-212ENST00000546744 KIDINS220Q9ULH0 1771 aa14.76□□□□□ -0.05
PTCH1-212ENST00000546744 UGGT1Q9NYU2 1555 aa14.76□□□□□ -0.05
PTCH1-212ENST00000546744 IFFO1Q0D2I5 559 aa14.76□□□□□ -0.05
PTCH1-212ENST00000546744 AACSQ86V21 672 aa14.76□□□□□ -0.05
PTCH1-212ENST00000546744 CETN2P41208 172 aa14.76□□□□□ -0.05
PTCH1-212ENST00000546744 HDXQ7Z353 690 aa14.76□□□□□ -0.05
PTCH1-212ENST00000546744 KCNG4Q8TDN1 519 aa14.76□□□□□ -0.05
PTCH1-212ENST00000546744 DNAI1Q9UI46 699 aa14.76□□□□□ -0.05
PTCH1-212ENST00000546744 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.76□□□□□ -0.05
PTCH1-212ENST00000546744 ATP2B1P20020 1258 aa14.76□□□□□ -0.05
PTCH1-212ENST00000546744 PLEKHO1Q53GL0 409 aaPredicted RBP14.76□□□□□ -0.05
PTCH1-212ENST00000546744 OTUD6BQ8N6M0 293 aa14.75□□□□□ -0.05
PTCH1-212ENST00000546744 IBTKQ9P2D0 1353 aaPredicted RBP14.75□□□□□ -0.05
PTCH1-212ENST00000546744 EFCAB6Q5THR3 1501 aa14.75□□□□□ -0.05
PTCH1-212ENST00000546744 VPS37DQ86XT2 251 aa14.75□□□□□ -0.05
PTCH1-212ENST00000546744 PRDM15P57071 1507 aaPredicted RBP14.75□□□□□ -0.05
PTCH1-212ENST00000546744 PRPF40BQ6NWY9 871 aaKnown RBP14.75□□□□□ -0.05
PTCH1-212ENST00000546744 USP48Q86UV5 1035 aa14.75□□□□□ -0.05
PTCH1-212ENST00000546744 F13A1P00488 732 aa14.74□□□□□ -0.05
PTCH1-212ENST00000546744 EVI5LQ96CN4 794 aa14.74□□□□□ -0.05
PTCH1-212ENST00000546744 TESK2Q96S53 571 aa14.74□□□□□ -0.05
PTCH1-212ENST00000546744 TYRO3Q06418 890 aa14.74□□□□□ -0.05
PTCH1-212ENST00000546744 NCBP3Q53F19 620 aaKnown RBP14.74□□□□□ -0.05
PTCH1-212ENST00000546744 GIMAP6Q6P9H5 292 aa14.74□□□□□ -0.05
PTCH1-212ENST00000546744 CNNM3Q8NE01 707 aa14.74□□□□□ -0.05
PTCH1-212ENST00000546744 GLI2P10070 1586 aa14.74□□□□□ -0.05
PTCH1-212ENST00000546744 KDM2BQ8NHM5 1336 aa14.74□□□□□ -0.05
PTCH1-212ENST00000546744 CCDC102BQ68D86 513 aa14.74□□□□□ -0.05
PTCH1-212ENST00000546744 FAM114A1Q8IWE2 563 aa14.74□□□□□ -0.05
PTCH1-212ENST00000546744 TNRQ92752 1358 aa14.74□□□□□ -0.05
PTCH1-212ENST00000546744 ANO6Q4KMQ2 910 aa14.73□□□□□ -0.05
PTCH1-212ENST00000546744 MICALL1Q8N3F8 863 aa14.73□□□□□ -0.05
PTCH1-212ENST00000546744 RAPGEF4Q8WZA2 1011 aa14.73□□□□□ -0.05
PTCH1-212ENST00000546744 ABCC3O15438 1527 aa14.73□□□□□ -0.05
PTCH1-212ENST00000546744 KDM5CP41229 1560 aa14.73□□□□□ -0.05
PTCH1-212ENST00000546744 NUTM2FA1L443 756 aa14.73□□□□□ -0.05
PTCH1-212ENST00000546744 BMP15O95972 392 aa14.73□□□□□ -0.05
PTCH1-212ENST00000546744 IFI16Q16666 785 aaKnown RBP14.73□□□□□ -0.05
PTCH1-212ENST00000546744 THEMISQ8N1K5 641 aaPredicted RBP14.73□□□□□ -0.05
PTCH1-212ENST00000546744 RSRC1Q96IZ7 334 aaKnown RBP14.73□□□□□ -0.05
PTCH1-212ENST00000546744 DIP2BQ9P265 1576 aa14.73□□□□□ -0.05
PTCH1-212ENST00000546744 SKAP1Q86WV1 359 aa14.73□□□□□ -0.05
PTCH1-212ENST00000546744 RAI14Q9P0K7 980 aa14.73□□□□□ -0.05
PTCH1-212ENST00000546744 STMN4Q9H169 189 aaPredicted RBP14.73□□□□□ -0.05
PTCH1-212ENST00000546744 EXOC6BQ9Y2D4 811 aa14.73□□□□□ -0.05
PTCH1-212ENST00000546744 PCDHB15Q9Y5E8 787 aa14.73□□□□□ -0.05
PTCH1-212ENST00000546744 E9PCH4 1651 aa14.72□□□□□ -0.05
PTCH1-212ENST00000546744 CYLC1P35663 651 aaPredicted RBP14.72□□□□□ -0.05
PTCH1-212ENST00000546744 UBASH3AP57075 661 aa14.72□□□□□ -0.05
PTCH1-212ENST00000546744 DMTNQ08495 405 aa14.72□□□□□ -0.05
PTCH1-212ENST00000546744 SPECC1Q5M775 1068 aa14.72□□□□□ -0.05
PTCH1-212ENST00000546744 ZFYVE27Q5T4F4 411 aa14.72□□□□□ -0.05
PTCH1-212ENST00000546744 SPATA24Q86W54 205 aa14.72□□□□□ -0.05
PTCH1-212ENST00000546744 ANKS4BQ8N8V4 417 aa14.72□□□□□ -0.05
PTCH1-212ENST00000546744 PIK3C2GO75747 1445 aa14.72□□□□□ -0.05
PTCH1-212ENST00000546744 TANGO6Q9C0B7 1094 aa14.72□□□□□ -0.05
PTCH1-212ENST00000546744 CTAGE9A4FU28 777 aa14.71□□□□□ -0.05
PTCH1-212ENST00000546744 MCM6Q14566 821 aa14.71□□□□□ -0.05
PTCH1-212ENST00000546744 DNAJC21Q5F1R6 531 aaKnown RBP14.71□□□□□ -0.05
PTCH1-212ENST00000546744 C6orf163Q5TEZ5 329 aa14.71□□□□□ -0.05
PTCH1-212ENST00000546744 C10orf67Q8IYJ2 551 aa14.71□□□□□ -0.05
PTCH1-212ENST00000546744 NUP88Q99567 741 aaPredicted RBP14.71□□□□□ -0.05
PTCH1-212ENST00000546744 GDPD2Q9HCC8 539 aa14.71□□□□□ -0.05
PTCH1-212ENST00000546744 FSD2A1L4K1 749 aa14.71□□□□□ -0.05
PTCH1-212ENST00000546744 IMPACTQ9P2X3 320 aa14.71□□□□□ -0.05
PTCH1-212ENST00000546744 TTC39AQ5SRH9 613 aa14.71□□□□□ -0.05
PTCH1-212ENST00000546744 CCDC121Q6ZUS5 278 aa14.71□□□□□ -0.05
PTCH1-212ENST00000546744 TICAM2Q86XR7 235 aa14.71□□□□□ -0.05
PTCH1-212ENST00000546744 MRPS27Q92552 414 aaKnown RBP14.71□□□□□ -0.05
PTCH1-212ENST00000546744 ELP1O95163 1332 aa14.71□□□□□ -0.06
PTCH1-212ENST00000546744 SULT6B1Q6IMI4 303 aa14.71□□□□□ -0.06
PTCH1-212ENST00000546744 ECHDC1Q9NTX5 307 aa14.71□□□□□ -0.06
PTCH1-212ENST00000546744 SPHKAPQ2M3C7 1700 aa14.7□□□□□ -0.06
PTCH1-212ENST00000546744 ABCA6Q8N139 1617 aa14.7□□□□□ -0.06
PTCH1-212ENST00000546744 IL1RAPL2Q9NP60 686 aa14.7□□□□□ -0.06
PTCH1-212ENST00000546744 DIP2CQ9Y2E4 1556 aa14.7□□□□□ -0.06
PTCH1-212ENST00000546744 KRT18P05783 430 aaKnown RBP14.7□□□□□ -0.06
PTCH1-212ENST00000546744 CPSF2Q9P2I0 782 aaKnown RBP14.7□□□□□ -0.06
PTCH1-212ENST00000546744 G3V3G9 751 aa14.7□□□□□ -0.06
PTCH1-212ENST00000546744 PPP1R12BO60237 982 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-212ENST00000546744 DCAF8Q5TAQ9 597 aa14.7□□□□□ -0.06
PTCH1-212ENST00000546744 RBSNQ9H1K0 784 aa14.7□□□□□ -0.06
PTCH1-212ENST00000546744 CLTCL1P53675 1640 aa14.7□□□□□ -0.06
PTCH1-212ENST00000546744 POLR3AO14802 1390 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-212ENST00000546744 ARHGAP25P42331 645 aa14.69□□□□□ -0.06
PTCH1-212ENST00000546744 ANKRD24Q8TF21 1146 aa14.69□□□□□ -0.06
PTCH1-212ENST00000546744 RIOK3O14730 519 aaKnown RBP14.69□□□□□ -0.06
PTCH1-212ENST00000546744 MYO1BO43795 1136 aa14.69□□□□□ -0.06
PTCH1-212ENST00000546744 ANKRD44Q8N8A2 993 aa14.69□□□□□ -0.06
PTCH1-212ENST00000546744 ZNF830Q96NB3 372 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-212ENST00000546744 DACT1Q9NYF0 836 aa14.69□□□□□ -0.06
PTCH1-212ENST00000546744 ATP8B1O43520 1251 aa14.69□□□□□ -0.06
PTCH1-212ENST00000546744 MPHOSPH8Q99549 860 aa14.69□□□□□ -0.06
PTCH1-212ENST00000546744 TSG101Q99816 390 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms