RNA–Protein interactions for RNA: ENST00000546653.5

VDR-203, Transcript of vitamin D receptor, humanhuman

TSL 5

Gene VDR, Length 937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-203ENST00000546653 NIP7Q9Y221 180 aaKnown RBP eCLIP18.06■□□□□ 0.48
VDR-203ENST00000546653 USP16Q9Y5T5 823 aa18.06■□□□□ 0.48
VDR-203ENST00000546653 EIF4G2P78344 907 aaKnown RBP eCLIP18.05■□□□□ 0.48
VDR-203ENST00000546653 CRY2Q49AN0 593 aa18.05■□□□□ 0.48
VDR-203ENST00000546653 LARGE2Q8N3Y3 721 aa18.05■□□□□ 0.48
VDR-203ENST00000546653 ADARB2Q9NS39 739 aaKnown RBP18.05■□□□□ 0.48
VDR-203ENST00000546653 GPRC5DQ9NZD1 345 aa18.05■□□□□ 0.48
VDR-203ENST00000546653 ZNF652Q9Y2D9 606 aa18.05■□□□□ 0.48
VDR-203ENST00000546653 PRAMEF22A3QJZ6 481 aa18.04■□□□□ 0.48
VDR-203ENST00000546653 CC2D2BQ6DHV5 1058 aa18.04■□□□□ 0.48
VDR-203ENST00000546653 PGAP2Q9UHJ9 254 aa18.04■□□□□ 0.48
VDR-203ENST00000546653 ABCC12Q96J65 1359 aa18.04■□□□□ 0.48
VDR-203ENST00000546653 HSPA5P11021 654 aaKnown RBP18.03■□□□□ 0.48
VDR-203ENST00000546653 NOGQ13253 232 aa18.03■□□□□ 0.48
VDR-203ENST00000546653 ZNF408Q9H9D4 720 aa18.02■□□□□ 0.48
VDR-203ENST00000546653 GNAT3A8MTJ3 354 aa18.01■□□□□ 0.47
VDR-203ENST00000546653 NBPF26B4DH59 902 aa18.01■□□□□ 0.47
VDR-203ENST00000546653 RGL2O15211 777 aa18.01■□□□□ 0.47
VDR-203ENST00000546653 HLFQ16534 295 aa18.01■□□□□ 0.47
VDR-203ENST00000546653 NBPF10Q6P3W6 841 aaKnown RBP18.01■□□□□ 0.47
VDR-203ENST00000546653 NBPF15Q8N660 670 aa18.01■□□□□ 0.47
VDR-203ENST00000546653 AKAP11Q9UKA4 1901 aa18.01■□□□□ 0.47
VDR-203ENST00000546653 CEMIPQ8WUJ3 1361 aa18.01■□□□□ 0.47
VDR-203ENST00000546653 HOXA10P31260 410 aaPredicted RBP18■□□□□ 0.47
VDR-203ENST00000546653 HIRAP54198 1017 aaPredicted RBP18■□□□□ 0.47
VDR-203ENST00000546653 NIM1KQ8IY84 436 aa18■□□□□ 0.47
VDR-203ENST00000546653 NPC1L1Q9UHC9 1359 aa18■□□□□ 0.47
VDR-203ENST00000546653 POLR2AP24928 1970 aaKnown RBP17.99■□□□□ 0.47
VDR-203ENST00000546653 MKI67P46013 3256 aaKnown RBP17.99■□□□□ 0.47
VDR-203ENST00000546653 FAM155AB1AL88 458 aaPredicted RBP17.99■□□□□ 0.47
VDR-203ENST00000546653 CXCL9Q07325 125 aa17.99■□□□□ 0.47
VDR-203ENST00000546653 PCGF6Q9BYE7 350 aa17.99■□□□□ 0.47
VDR-203ENST00000546653 NUP98P52948 1817 aa17.99■□□□□ 0.47
VDR-203ENST00000546653 RIC1Q4ADV7 1423 aa17.98■□□□□ 0.47
VDR-203ENST00000546653 BTBD11A6QL63 1104 aa17.98■□□□□ 0.47
VDR-203ENST00000546653 GMPSP49915 693 aaPredicted RBP17.98■□□□□ 0.47
VDR-203ENST00000546653 HUNKP57058 714 aa17.98■□□□□ 0.47
VDR-203ENST00000546653 GRIPAP1Q4V328 841 aa17.98■□□□□ 0.47
VDR-203ENST00000546653 DLK2Q6UY11 383 aa17.98■□□□□ 0.47
VDR-203ENST00000546653 NUTM1Q86Y26 1132 aa17.98■□□□□ 0.47
VDR-203ENST00000546653 SAGE1Q9NXZ1 904 aa17.98■□□□□ 0.47
VDR-203ENST00000546653 PPIP5K2O43314 1243 aa17.97■□□□□ 0.47
VDR-203ENST00000546653 DIAPH1O60610 1272 aaKnown RBP17.97■□□□□ 0.47
VDR-203ENST00000546653 GTF2E1P29083 439 aaPredicted RBP17.97■□□□□ 0.47
VDR-203ENST00000546653 AOC3Q16853 763 aa17.97■□□□□ 0.47
VDR-203ENST00000546653 AMER1Q5JTC6 1135 aaPredicted RBP17.97■□□□□ 0.47
VDR-203ENST00000546653 ZC3H15Q8WU90 426 aaKnown RBP17.97■□□□□ 0.47
VDR-203ENST00000546653 TCERG1O14776 1098 aaKnown RBP17.96■□□□□ 0.47
VDR-203ENST00000546653 CDC37L1Q7L3B6 337 aa17.96■□□□□ 0.47
VDR-203ENST00000546653 GAS2L2Q8NHY3 880 aa17.96■□□□□ 0.47
VDR-203ENST00000546653 TRPM4Q8TD43 1214 aa17.96■□□□□ 0.47
VDR-203ENST00000546653 KNSTRNQ9Y448 316 aa17.96■□□□□ 0.47
VDR-203ENST00000546653 KIF7Q2M1P5 1343 aa17.96■□□□□ 0.46
VDR-203ENST00000546653 RPGRQ92834 1020 aaKnown RBP17.95■□□□□ 0.46
VDR-203ENST00000546653 RNF186Q9NXI6 227 aa17.95■□□□□ 0.46
VDR-203ENST00000546653 ZNRF3Q9ULT6 936 aa17.95■□□□□ 0.46
VDR-203ENST00000546653 COL3A1P02461 1466 aaPredicted RBP17.95■□□□□ 0.46
VDR-203ENST00000546653 SHTN1A0MZ66 631 aa17.94■□□□□ 0.46
VDR-203ENST00000546653 PPEF1O14829 653 aaPredicted RBP17.94■□□□□ 0.46
VDR-203ENST00000546653 TRPA1O75762 1119 aa17.94■□□□□ 0.46
VDR-203ENST00000546653 SNRPA1P09661 255 aaKnown RBP17.94■□□□□ 0.46
VDR-203ENST00000546653 KIF23Q02241 960 aaPredicted RBP17.94■□□□□ 0.46
VDR-203ENST00000546653 RGMBQ6NW40 437 aa17.94■□□□□ 0.46
VDR-203ENST00000546653 CRAMP1Q96RY5 1269 aa17.94■□□□□ 0.46
VDR-203ENST00000546653 C3orf67Q6ZVT6 689 aa17.93■□□□□ 0.46
VDR-203ENST00000546653 CTU1Q7Z7A3 348 aaKnown RBP17.93■□□□□ 0.46
VDR-203ENST00000546653 USP48Q86UV5 1035 aa17.93■□□□□ 0.46
VDR-203ENST00000546653 NYXQ9GZU5 481 aa17.93■□□□□ 0.46
VDR-203ENST00000546653 CDHR2Q9BYE9 1310 aa17.93■□□□□ 0.46
VDR-203ENST00000546653 VPS33BQ9H267 617 aa17.92■□□□□ 0.46
VDR-203ENST00000546653 HPS5Q9UPZ3 1129 aa17.92■□□□□ 0.46
VDR-203ENST00000546653 RBM17Q96I25 401 aaKnown RBP17.91■□□□□ 0.46
VDR-203ENST00000546653 LAMB4A4D0S4 1761 aa17.9■□□□□ 0.46
VDR-203ENST00000546653 PHACTR3Q96KR7 559 aa17.9■□□□□ 0.46
VDR-203ENST00000546653 BCL2L13Q9BXK5 485 aa17.9■□□□□ 0.46
VDR-203ENST00000546653 RTFDC1Q9BY42 306 aaPredicted RBP17.9■□□□□ 0.46
VDR-203ENST00000546653 UBN2Q6ZU65 1347 aa17.9■□□□□ 0.46
VDR-203ENST00000546653 IBTKQ9P2D0 1353 aaPredicted RBP17.9■□□□□ 0.46
VDR-203ENST00000546653 RAD17O75943 681 aa17.89■□□□□ 0.45
VDR-203ENST00000546653 CCDC102AQ96A19 550 aa17.89■□□□□ 0.45
VDR-203ENST00000546653 CSRNP1Q96S65 589 aa17.89■□□□□ 0.45
VDR-203ENST00000546653 CNOT7Q9UIV1 285 aaKnown RBP17.89■□□□□ 0.45
VDR-203ENST00000546653 ATP6V0A2Q9Y487 856 aa17.89■□□□□ 0.45
VDR-203ENST00000546653 HTTP42858 3142 aa17.89■□□□□ 0.45
VDR-203ENST00000546653 SUSD4Q5VX71 490 aa17.88■□□□□ 0.45
VDR-203ENST00000546653 GBA2Q9HCG7 927 aaPredicted RBP17.88■□□□□ 0.45
VDR-203ENST00000546653 ERVV-1B6SEH8 477 aa17.87■□□□□ 0.45
VDR-203ENST00000546653 U2SURPO15042 1029 aaKnown RBP17.87■□□□□ 0.45
VDR-203ENST00000546653 GPTP24298 496 aa17.87■□□□□ 0.45
VDR-203ENST00000546653 ZNF157P51786 506 aaPredicted RBP17.87■□□□□ 0.45
VDR-203ENST00000546653 GCC1Q96CN9 775 aa17.87■□□□□ 0.45
VDR-203ENST00000546653 CENPFP49454 3210 aa17.86■□□□□ 0.45
VDR-203ENST00000546653 YDJCA8MPS7 323 aa17.86■□□□□ 0.45
VDR-203ENST00000546653 SLC10A3P09131 477 aa17.86■□□□□ 0.45
VDR-203ENST00000546653 KIAA2012Q0VF49 1180 aa17.86■□□□□ 0.45
VDR-203ENST00000546653 TNIP1Q15025 636 aa17.86■□□□□ 0.45
VDR-203ENST00000546653 HABP4Q5JVS0 413 aaKnown RBP17.86■□□□□ 0.45
VDR-203ENST00000546653 MICALL2Q8IY33 904 aa17.86■□□□□ 0.45
VDR-203ENST00000546653 MAP3K15Q6ZN16 1313 aa17.86■□□□□ 0.45
VDR-203ENST00000546653 ADM5C9JUS6 153 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms