RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 HSCBQ8IWL3 235 aa14.62□□□□□ -0.07
CCDC38-202ENST00000546386 PKD1L3Q7Z443 1732 aa14.61□□□□□ -0.07
CCDC38-202ENST00000546386 HCLS1P14317 486 aaPredicted RBP14.61□□□□□ -0.07
CCDC38-202ENST00000546386 RBM25P49756 843 aaKnown RBP14.61□□□□□ -0.07
CCDC38-202ENST00000546386 FOXO4P98177 505 aa14.61□□□□□ -0.07
CCDC38-202ENST00000546386 CASC1Q6TDU7 716 aa14.61□□□□□ -0.07
CCDC38-202ENST00000546386 CHAMP1Q96JM3 812 aa14.61□□□□□ -0.07
CCDC38-202ENST00000546386 FAM227BQ96M60 508 aa14.61□□□□□ -0.07
CCDC38-202ENST00000546386 DBNDD2Q9BQY9 259 aa14.61□□□□□ -0.07
CCDC38-202ENST00000546386 PHLPP1O60346 1717 aa14.61□□□□□ -0.07
CCDC38-202ENST00000546386 ERC2O15083 957 aa14.61□□□□□ -0.07
CCDC38-202ENST00000546386 ESYT1Q9BSJ8 1104 aa14.61□□□□□ -0.07
CCDC38-202ENST00000546386 USP21Q9UK80 565 aa14.61□□□□□ -0.07
CCDC38-202ENST00000546386 TOGARAM1Q9Y4F4 1720 aa14.61□□□□□ -0.07
CCDC38-202ENST00000546386 KCPQ6ZWJ8 1503 aa14.61□□□□□ -0.07
CCDC38-202ENST00000546386 RAB11FIP3O75154 756 aa14.6□□□□□ -0.07
CCDC38-202ENST00000546386 HELBQ8NG08 1087 aaPredicted RBP14.6□□□□□ -0.07
CCDC38-202ENST00000546386 SNRKQ9NRH2 765 aa14.6□□□□□ -0.07
CCDC38-202ENST00000546386 COL16A1Q07092 1604 aaPredicted RBP14.6□□□□□ -0.07
CCDC38-202ENST00000546386 PXDNLA1KZ92 1463 aa14.6□□□□□ -0.07
CCDC38-202ENST00000546386 SPATA31A5Q5VU36 1347 aa14.6□□□□□ -0.07
CCDC38-202ENST00000546386 SPATA31A7Q8IWB4 1347 aa14.6□□□□□ -0.07
CCDC38-202ENST00000546386 CASP7P55210 303 aa14.6□□□□□ -0.07
CCDC38-202ENST00000546386 KIF6Q6ZMV9 814 aa14.6□□□□□ -0.07
CCDC38-202ENST00000546386 DZIP3Q86Y13 1208 aaKnown RBP14.6□□□□□ -0.07
CCDC38-202ENST00000546386 OSBPL3Q9H4L5 887 aa14.6□□□□□ -0.07
CCDC38-202ENST00000546386 DBNLQ9UJU6 430 aaKnown RBP14.6□□□□□ -0.07
CCDC38-202ENST00000546386 DDX46Q7L014 1031 aaKnown RBP14.59□□□□□ -0.07
CCDC38-202ENST00000546386 SHANK3Q9BYB0 1731 aa14.59□□□□□ -0.07
CCDC38-202ENST00000546386 LOC102724428A0A0B4J2F2 783 aa14.59□□□□□ -0.07
CCDC38-202ENST00000546386 CRKLP46109 303 aaKnown RBP14.59□□□□□ -0.07
CCDC38-202ENST00000546386 RFX5P48382 616 aaPredicted RBP14.59□□□□□ -0.07
CCDC38-202ENST00000546386 SIK1P57059 783 aa14.59□□□□□ -0.07
CCDC38-202ENST00000546386 MTX1Q13505 466 aa14.59□□□□□ -0.07
CCDC38-202ENST00000546386 TRMT112Q9UI30 125 aaKnown RBP14.59□□□□□ -0.07
CCDC38-202ENST00000546386 ADAMTS7Q9UKP4 1686 aa14.59□□□□□ -0.07
CCDC38-202ENST00000546386 BCL9O00512 1426 aa14.58□□□□□ -0.07
CCDC38-202ENST00000546386 NEK4P51957 841 aa14.58□□□□□ -0.08
CCDC38-202ENST00000546386 TCIRG1Q13488 830 aa14.58□□□□□ -0.08
CCDC38-202ENST00000546386 FOXD4L6Q3SYB3 417 aaPredicted RBP14.58□□□□□ -0.08
CCDC38-202ENST00000546386 TPRNQ4KMQ1 711 aa14.58□□□□□ -0.08
CCDC38-202ENST00000546386 FOXD4L3Q6VB84 417 aaPredicted RBP14.58□□□□□ -0.08
CCDC38-202ENST00000546386 SEC62Q99442 399 aaKnown RBP14.58□□□□□ -0.08
CCDC38-202ENST00000546386 ECHDC1Q9NTX5 307 aa14.58□□□□□ -0.08
CCDC38-202ENST00000546386 PARP4Q9UKK3 1724 aaKnown RBP14.58□□□□□ -0.08
CCDC38-202ENST00000546386 MRC1P22897 1456 aa14.58□□□□□ -0.08
CCDC38-202ENST00000546386 H7C1W4 665 aa14.58□□□□□ -0.08
CCDC38-202ENST00000546386 HSP90AB3PQ58FF7 597 aa14.58□□□□□ -0.08
CCDC38-202ENST00000546386 PI16Q6UXB8 463 aa14.58□□□□□ -0.08
CCDC38-202ENST00000546386 AMIGO3Q86WK7 504 aa14.57□□□□□ -0.08
CCDC38-202ENST00000546386 STAP2Q9UGK3 403 aa14.57□□□□□ -0.08
CCDC38-202ENST00000546386 UTYO14607 1347 aa14.57□□□□□ -0.08
CCDC38-202ENST00000546386 WTIPA6NIX2 430 aaPredicted RBP14.57□□□□□ -0.08
CCDC38-202ENST00000546386 PTH1RQ03431 593 aa14.57□□□□□ -0.08
CCDC38-202ENST00000546386 PKP1Q13835 747 aa14.57□□□□□ -0.08
CCDC38-202ENST00000546386 CCDC129Q6ZRS4 1044 aa14.57□□□□□ -0.08
CCDC38-202ENST00000546386 TCEANC2Q96MN5 208 aa14.57□□□□□ -0.08
CCDC38-202ENST00000546386 GREM2Q9H772 168 aa14.57□□□□□ -0.08
CCDC38-202ENST00000546386 PHF14O94880 888 aa14.56□□□□□ -0.08
CCDC38-202ENST00000546386 ZGPATQ8N5A5 531 aaKnown RBP14.56□□□□□ -0.08
CCDC38-202ENST00000546386 ANTXR1Q9H6X2 564 aa14.56□□□□□ -0.08
CCDC38-202ENST00000546386 DISP2A7MBM2 1401 aa14.56□□□□□ -0.08
CCDC38-202ENST00000546386 HSP90AB4PQ58FF6 505 aa14.56□□□□□ -0.08
CCDC38-202ENST00000546386 TAF7LQ5H9L4 462 aa14.56□□□□□ -0.08
CCDC38-202ENST00000546386 FSD1Q9BTV5 496 aa14.56□□□□□ -0.08
CCDC38-202ENST00000546386 GZF1Q9H116 711 aaPredicted RBP14.56□□□□□ -0.08
CCDC38-202ENST00000546386 DIAPH3Q9NSV4 1193 aa14.56□□□□□ -0.08
CCDC38-202ENST00000546386 TAF6LQ9Y6J9 622 aa14.56□□□□□ -0.08
CCDC38-202ENST00000546386 GLI3P10071 1580 aa14.55□□□□□ -0.08
CCDC38-202ENST00000546386 TNNI3KQ59H18 835 aa14.55□□□□□ -0.08
CCDC38-202ENST00000546386 INTS5Q6P9B9 1019 aaKnown RBP14.55□□□□□ -0.08
CCDC38-202ENST00000546386 RASEFQ8IZ41 740 aa14.55□□□□□ -0.08
CCDC38-202ENST00000546386 ATF5Q9Y2D1 282 aaPredicted RBP14.55□□□□□ -0.08
CCDC38-202ENST00000546386 FPGT-TNNI3KV9GXZ4 949 aa14.55□□□□□ -0.08
CCDC38-202ENST00000546386 UBN2Q6ZU65 1347 aa14.55□□□□□ -0.08
CCDC38-202ENST00000546386 REC8O95072 547 aa14.55□□□□□ -0.08
CCDC38-202ENST00000546386 ADORA1P30542 326 aa14.55□□□□□ -0.08
CCDC38-202ENST00000546386 ATG9AQ7Z3C6 839 aa14.55□□□□□ -0.08
CCDC38-202ENST00000546386 SLC51AQ86UW1 340 aa14.55□□□□□ -0.08
CCDC38-202ENST00000546386 CNTROBQ8N137 903 aa14.55□□□□□ -0.08
CCDC38-202ENST00000546386 ATXN8OSP0DMR3 200 aa14.54□□□□□ -0.08
CCDC38-202ENST00000546386 CCDC57Q2TAC2 916 aa14.54□□□□□ -0.08
CCDC38-202ENST00000546386 NLRP10Q86W26 655 aa14.54□□□□□ -0.08
CCDC38-202ENST00000546386 CCDC191Q8NCU4 936 aa14.54□□□□□ -0.08
CCDC38-202ENST00000546386 A0A0D9SFI3 127 aa14.54□□□□□ -0.08
CCDC38-202ENST00000546386 FKBP4Q02790 459 aaKnown RBP eCLIP14.54□□□□□ -0.08
CCDC38-202ENST00000546386 MAP3K15Q6ZN16 1313 aa14.54□□□□□ -0.08
CCDC38-202ENST00000546386 GLRX3O76003 335 aaKnown RBP14.53□□□□□ -0.08
CCDC38-202ENST00000546386 NMIQ13287 307 aaPredicted RBP14.53□□□□□ -0.08
CCDC38-202ENST00000546386 GIGYF2Q6Y7W6 1299 aaKnown RBP14.53□□□□□ -0.08
CCDC38-202ENST00000546386 SEC31BQ9NQW1 1179 aa14.53□□□□□ -0.08
CCDC38-202ENST00000546386 AK9Q5TCS8 1911 aa14.53□□□□□ -0.08
CCDC38-202ENST00000546386 ITGB4P16144 1822 aa14.53□□□□□ -0.08
CCDC38-202ENST00000546386 AFDNP55196 1824 aaKnown RBP14.53□□□□□ -0.08
CCDC38-202ENST00000546386 GOLIM4O00461 696 aa14.53□□□□□ -0.08
CCDC38-202ENST00000546386 IRS4O14654 1257 aaPredicted RBP14.53□□□□□ -0.08
CCDC38-202ENST00000546386 TAF5LO75529 589 aa14.53□□□□□ -0.08
CCDC38-202ENST00000546386 SUSD4Q5VX71 490 aa14.53□□□□□ -0.08
CCDC38-202ENST00000546386 ZNF589Q86UQ0 364 aaPredicted RBP14.53□□□□□ -0.08
CCDC38-202ENST00000546386 SRP68Q9UHB9 627 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms