RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 TMX1Q9H3N1 280 aa14.15□□□□□ -0.15
NPC1L1-204ENST00000546276 TTC41PQ6P2S7 1318 aa14.14□□□□□ -0.15
NPC1L1-204ENST00000546276 ZC3H6P61129 1189 aaKnown RBP14.14□□□□□ -0.15
NPC1L1-204ENST00000546276 GNG11P61952 73 aa14.14□□□□□ -0.15
NPC1L1-204ENST00000546276 EIF4A2Q14240 407 aaKnown RBP14.14□□□□□ -0.15
NPC1L1-204ENST00000546276 SSRP1Q08945 709 aaKnown RBP14.14□□□□□ -0.15
NPC1L1-204ENST00000546276 SPA17Q15506 151 aa14.14□□□□□ -0.15
NPC1L1-204ENST00000546276 MRPS27Q92552 414 aaKnown RBP14.14□□□□□ -0.15
NPC1L1-204ENST00000546276 CCDC102BQ68D86 513 aa14.14□□□□□ -0.15
NPC1L1-204ENST00000546276 ANXA1P04083 346 aa14.13□□□□□ -0.15
NPC1L1-204ENST00000546276 SYT1P21579 422 aa14.13□□□□□ -0.15
NPC1L1-204ENST00000546276 MAPK8IP2Q13387 824 aaPredicted RBP14.13□□□□□ -0.15
NPC1L1-204ENST00000546276 TRERF1Q96PN7 1200 aa14.13□□□□□ -0.15
NPC1L1-204ENST00000546276 TRAPPC8Q9Y2L5 1435 aa14.13□□□□□ -0.15
NPC1L1-204ENST00000546276 SLU7O95391 586 aaKnown RBP14.13□□□□□ -0.15
NPC1L1-204ENST00000546276 KRT24Q2M2I5 525 aa14.13□□□□□ -0.15
NPC1L1-204ENST00000546276 ADAMTS12P58397 1594 aa14.13□□□□□ -0.15
NPC1L1-204ENST00000546276 SHTN1A0MZ66 631 aa14.13□□□□□ -0.15
NPC1L1-204ENST00000546276 ISM2Q6H9L7 571 aa14.13□□□□□ -0.15
NPC1L1-204ENST00000546276 KCNG4Q8TDN1 519 aa14.13□□□□□ -0.15
NPC1L1-204ENST00000546276 OTUD7AQ8TE49 926 aaPredicted RBP14.13□□□□□ -0.15
NPC1L1-204ENST00000546276 CHPF2Q9P2E5 772 aa14.13□□□□□ -0.15
NPC1L1-204ENST00000546276 TRIM35Q9UPQ4 493 aa14.13□□□□□ -0.15
NPC1L1-204ENST00000546276 PPFIA3O75145 1194 aa14.13□□□□□ -0.15
NPC1L1-204ENST00000546276 TUBB4AP04350 444 aa14.13□□□□□ -0.15
NPC1L1-204ENST00000546276 TIGD1Q96MW7 591 aa14.13□□□□□ -0.15
NPC1L1-204ENST00000546276 NUP88Q99567 741 aaPredicted RBP14.13□□□□□ -0.15
NPC1L1-204ENST00000546276 LMBRD1Q9NUN5 540 aa14.13□□□□□ -0.15
NPC1L1-204ENST00000546276 KIF21AQ7Z4S6 1674 aa14.13□□□□□ -0.15
NPC1L1-204ENST00000546276 PPIP5K1Q6PFW1 1433 aa14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 ALDH1L1O75891 902 aa14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 IARSP41252 1262 aaKnown RBP14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 AOPEPQ8N6M6 819 aa14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 YEATS4O95619 227 aa14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 UBASH3AP57075 661 aa14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 TAF4BQ92750 862 aa14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 BMP2KQ9NSY1 1161 aaPredicted RBP14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 AMOTL2Q9Y2J4 779 aa14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 MSH6P52701 1360 aa14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 SOS1Q07889 1333 aaPredicted RBP14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 IFIT3O14879 490 aaKnown RBP14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 IKQ13123 557 aaPredicted RBP14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 ZFYVE27Q5T4F4 411 aa14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 ANKLE2Q86XL3 938 aa14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 ZHX3Q9H4I2 956 aa14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 SYKP43405 635 aa14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 IFIT5Q13325 482 aaKnown RBP14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 SYCP1Q15431 976 aa14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 PIBF1Q8WXW3 757 aa14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 DNAI1Q9UI46 699 aa14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 PHF8Q9UPP1 1060 aa14.12□□□□□ -0.15
NPC1L1-204ENST00000546276 NMIQ13287 307 aaPredicted RBP14.11□□□□□ -0.15
NPC1L1-204ENST00000546276 CCDC12Q8WUD4 166 aaPredicted RBP14.11□□□□□ -0.15
NPC1L1-204ENST00000546276 DENND4BO75064 1496 aaPredicted RBP14.11□□□□□ -0.15
NPC1L1-204ENST00000546276 Q6ZUG5 572 aa14.11□□□□□ -0.15
NPC1L1-204ENST00000546276 UBE3BQ7Z3V4 1068 aa14.11□□□□□ -0.15
NPC1L1-204ENST00000546276 SMAP1Q8IYB5 467 aaPredicted RBP14.11□□□□□ -0.15
NPC1L1-204ENST00000546276 CCDC82Q8N4S0 544 aa14.11□□□□□ -0.15
NPC1L1-204ENST00000546276 NCOA7Q8NI08 942 aa14.11□□□□□ -0.15
NPC1L1-204ENST00000546276 LRRC2Q9BYS8 371 aa14.11□□□□□ -0.15
NPC1L1-204ENST00000546276 FKBP15Q5T1M5 1219 aa14.11□□□□□ -0.15
NPC1L1-204ENST00000546276 HAND2P61296 217 aa14.11□□□□□ -0.15
NPC1L1-204ENST00000546276 MAP3K12Q12852 859 aa14.11□□□□□ -0.15
NPC1L1-204ENST00000546276 DDX46Q7L014 1031 aaKnown RBP14.11□□□□□ -0.15
NPC1L1-204ENST00000546276 LMAN1P49257 510 aa14.1□□□□□ -0.15
NPC1L1-204ENST00000546276 KANK3Q6NY19 840 aa14.1□□□□□ -0.15
NPC1L1-204ENST00000546276 FEZ1Q99689 392 aa14.1□□□□□ -0.15
NPC1L1-204ENST00000546276 ZRANB1Q9UGI0 708 aa14.1□□□□□ -0.15
NPC1L1-204ENST00000546276 IGHMBP2P38935 993 aaKnown RBP14.1□□□□□ -0.15
NPC1L1-204ENST00000546276 METAP2P50579 478 aaKnown RBP eCLIP14.1□□□□□ -0.15
NPC1L1-204ENST00000546276 CREB3L3Q68CJ9 461 aa14.1□□□□□ -0.15
NPC1L1-204ENST00000546276 PRDM11Q9NQV5 511 aa14.1□□□□□ -0.15
NPC1L1-204ENST00000546276 MINDY4BA8MYZ0 360 aa14.1□□□□□ -0.15
NPC1L1-204ENST00000546276 RUFY3Q7L099 469 aa14.1□□□□□ -0.15
NPC1L1-204ENST00000546276 LUZP1Q86V48 1076 aa14.1□□□□□ -0.15
NPC1L1-204ENST00000546276 ABCF2Q9UG63 623 aa14.1□□□□□ -0.15
NPC1L1-204ENST00000546276 GOLGA6L7A0A1B0GV03 622 aa14.1□□□□□ -0.15
NPC1L1-204ENST00000546276 PTCD1O75127 700 aaKnown RBP14.1□□□□□ -0.15
NPC1L1-204ENST00000546276 SSBP05455 408 aaKnown RBP eCLIP14.1□□□□□ -0.15
NPC1L1-204ENST00000546276 MTHFSDQ2M296 383 aaKnown RBP14.1□□□□□ -0.15
NPC1L1-204ENST00000546276 SAMD1Q6SPF0 538 aaPredicted RBP14.1□□□□□ -0.15
NPC1L1-204ENST00000546276 SRRTQ9BXP5 876 aaKnown RBP14.1□□□□□ -0.15
NPC1L1-204ENST00000546276 TTC21AQ8NDW8 1320 aa14.09□□□□□ -0.15
NPC1L1-204ENST00000546276 KLF18A0A0U1RQI7 1052 aa14.09□□□□□ -0.15
NPC1L1-204ENST00000546276 STARD3NLO95772 234 aa14.09□□□□□ -0.15
NPC1L1-204ENST00000546276 MCMDC2Q4G0Z9 681 aa14.09□□□□□ -0.15
NPC1L1-204ENST00000546276 SMARCC1Q92922 1105 aaPredicted RBP14.09□□□□□ -0.15
NPC1L1-204ENST00000546276 RNF41Q9H4P4 317 aaPredicted RBP14.09□□□□□ -0.15
NPC1L1-204ENST00000546276 CALRP27797 417 aaKnown RBP14.09□□□□□ -0.15
NPC1L1-204ENST00000546276 HSP90AB3PQ58FF7 597 aa14.09□□□□□ -0.15
NPC1L1-204ENST00000546276 ARFGAP3Q9NP61 516 aa14.09□□□□□ -0.15
NPC1L1-204ENST00000546276 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.09□□□□□ -0.15
NPC1L1-204ENST00000546276 V9GYY5 206 aaPredicted RBP14.09□□□□□ -0.15
NPC1L1-204ENST00000546276 GRM8O00222 908 aa14.09□□□□□ -0.15
NPC1L1-204ENST00000546276 MICU3Q86XE3 530 aa14.09□□□□□ -0.15
NPC1L1-204ENST00000546276 TRMT2AQ8IZ69 625 aaKnown RBP14.09□□□□□ -0.15
NPC1L1-204ENST00000546276 FAM107BQ9H098 131 aa14.09□□□□□ -0.15
NPC1L1-204ENST00000546276 TMEM67Q5HYA8 995 aa14.08□□□□□ -0.15
NPC1L1-204ENST00000546276 RAB11FIP4Q86YS3 637 aa14.08□□□□□ -0.15
NPC1L1-204ENST00000546276 CTCFLQ8NI51 663 aaPredicted RBP14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms