RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 BCL11AQ9H165 835 aa24.06■■□□□ 1.44
SKP2-208ENST00000546211 NOP58Q9Y2X3 529 aaKnown RBP24.06■■□□□ 1.44
SKP2-208ENST00000546211 NUP98P52948 1817 aa24.05■■□□□ 1.44
SKP2-208ENST00000546211 RPS6KA4O75676 772 aa24.05■■□□□ 1.44
SKP2-208ENST00000546211 ZNF652Q9Y2D9 606 aa24.05■■□□□ 1.44
SKP2-208ENST00000546211 OS9Q13438 667 aaPredicted RBP24.04■■□□□ 1.44
SKP2-208ENST00000546211 ZNF34Q8IZ26 560 aa24.04■■□□□ 1.44
SKP2-208ENST00000546211 GNPATO15228 680 aa24.03■■□□□ 1.44
SKP2-208ENST00000546211 SLC27A3Q5K4L6 730 aa24.03■■□□□ 1.44
SKP2-208ENST00000546211 POTEAQ6S8J7 498 aa24.03■■□□□ 1.44
SKP2-208ENST00000546211 KIF1BPQ96EK5 621 aa24.03■■□□□ 1.44
SKP2-208ENST00000546211 FOXO4P98177 505 aa24.03■■□□□ 1.44
SKP2-208ENST00000546211 RTCBQ9Y3I0 505 aaKnown RBP24.03■■□□□ 1.44
SKP2-208ENST00000546211 TAF1LQ8IZX4 1826 aa24.02■■□□□ 1.44
SKP2-208ENST00000546211 HMGB2P26583 209 aaKnown RBP24.02■■□□□ 1.44
SKP2-208ENST00000546211 LMBR1LQ6UX01 489 aa24.02■■□□□ 1.44
SKP2-208ENST00000546211 ERC1Q8IUD2 1116 aa24.02■■□□□ 1.44
SKP2-208ENST00000546211 PLEKHM2Q8IWE5 1019 aa24.02■■□□□ 1.44
SKP2-208ENST00000546211 C16orf71Q8IYS4 520 aaPredicted RBP24.02■■□□□ 1.44
SKP2-208ENST00000546211 RHPN1Q8TCX5 695 aa24.02■■□□□ 1.44
SKP2-208ENST00000546211 FAM89AQ96GI7 184 aa24.02■■□□□ 1.44
SKP2-208ENST00000546211 CDHR2Q9BYE9 1310 aa24.02■■□□□ 1.44
SKP2-208ENST00000546211 C4BP0C0L5 1744 aa24.01■■□□□ 1.43
SKP2-208ENST00000546211 RGL2O15211 777 aa24.01■■□□□ 1.43
SKP2-208ENST00000546211 G3BP1Q13283 466 aaKnown RBP eCLIP24.01■■□□□ 1.43
SKP2-208ENST00000546211 C8orf34Q49A92 452 aa24.01■■□□□ 1.43
SKP2-208ENST00000546211 PARP10Q53GL7 1025 aa24.01■■□□□ 1.43
SKP2-208ENST00000546211 CLEC4GQ6UXB4 293 aa24.01■■□□□ 1.43
SKP2-208ENST00000546211 TRMT112Q9UI30 125 aaKnown RBP24.01■■□□□ 1.43
SKP2-208ENST00000546211 PA2G4Q9UQ80 394 aaKnown RBP24.01■■□□□ 1.43
SKP2-208ENST00000546211 BCORQ6W2J9 1755 aa24■■□□□ 1.43
SKP2-208ENST00000546211 AK7Q96M32 723 aa24■■□□□ 1.43
SKP2-208ENST00000546211 CHMP3Q9Y3E7 222 aa24■■□□□ 1.43
SKP2-208ENST00000546211 RBM19Q9Y4C8 960 aaKnown RBP24■■□□□ 1.43
SKP2-208ENST00000546211 UBN2Q6ZU65 1347 aa24■■□□□ 1.43
SKP2-208ENST00000546211 PLA2G12BQ9BX93 195 aa23.99■■□□□ 1.43
SKP2-208ENST00000546211 LRRC4BQ9NT99 713 aa23.99■■□□□ 1.43
SKP2-208ENST00000546211 COPRSQ9NQ92 184 aa23.99■■□□□ 1.43
SKP2-208ENST00000546211 RFX5P48382 616 aaPredicted RBP23.98■■□□□ 1.43
SKP2-208ENST00000546211 BMP2KLQ5H9B9 411 aa23.98■■□□□ 1.43
SKP2-208ENST00000546211 OTUD7AQ8TE49 926 aaPredicted RBP23.98■■□□□ 1.43
SKP2-208ENST00000546211 IL1RAPL2Q9NP60 686 aa23.98■■□□□ 1.43
SKP2-208ENST00000546211 NARFQ9UHQ1 456 aa23.98■■□□□ 1.43
SKP2-208ENST00000546211 NIP7Q9Y221 180 aaKnown RBP eCLIP23.98■■□□□ 1.43
SKP2-208ENST00000546211 SCN7AQ01118 1682 aa23.96■■□□□ 1.43
SKP2-208ENST00000546211 ZPR1O75312 459 aa23.96■■□□□ 1.43
SKP2-208ENST00000546211 PTPN12Q05209 780 aaKnown RBP23.96■■□□□ 1.43
SKP2-208ENST00000546211 UTP14AQ9BVJ6 771 aaKnown RBP23.96■■□□□ 1.43
SKP2-208ENST00000546211 IRS4O14654 1257 aaPredicted RBP23.95■■□□□ 1.43
SKP2-208ENST00000546211 SUSD4Q5VX71 490 aa23.95■■□□□ 1.43
SKP2-208ENST00000546211 KLHDC4Q8TBB5 520 aa23.95■■□□□ 1.43
SKP2-208ENST00000546211 SIL1Q9H173 461 aa23.95■■□□□ 1.43
SKP2-208ENST00000546211 PLSCR1O15162 318 aa23.95■■□□□ 1.42
SKP2-208ENST00000546211 APBA3O96018 575 aa23.95■■□□□ 1.42
SKP2-208ENST00000546211 TXNRD1Q16881 649 aa23.95■■□□□ 1.42
SKP2-208ENST00000546211 TRAPPC3LQ5T215 181 aa23.95■■□□□ 1.42
SKP2-208ENST00000546211 CLASRPQ8N2M8 674 aaKnown RBP23.95■■□□□ 1.42
SKP2-208ENST00000546211 SH3TC1Q8TE82 1336 aa23.95■■□□□ 1.42
SKP2-208ENST00000546211 OSBPL3Q9H4L5 887 aa23.95■■□□□ 1.42
SKP2-208ENST00000546211 MX1P20591 662 aa23.94■■□□□ 1.42
SKP2-208ENST00000546211 PDE1AP54750 535 aa23.94■■□□□ 1.42
SKP2-208ENST00000546211 TTC22Q5TAA0 569 aa23.94■■□□□ 1.42
SKP2-208ENST00000546211 USPL1Q5W0Q7 1092 aa23.94■■□□□ 1.42
SKP2-208ENST00000546211 SMIM5Q71RC9 77 aa23.94■■□□□ 1.42
SKP2-208ENST00000546211 ARHGEF1Q92888 912 aaKnown RBP23.94■■□□□ 1.42
SKP2-208ENST00000546211 SALL3Q9BXA9 1300 aa23.93■■□□□ 1.42
SKP2-208ENST00000546211 PDE8AO60658 829 aa23.93■■□□□ 1.42
SKP2-208ENST00000546211 HSP90B1P14625 803 aaKnown RBP23.93■■□□□ 1.42
SKP2-208ENST00000546211 ADRA2BP18089 450 aa23.93■■□□□ 1.42
SKP2-208ENST00000546211 SYNE4Q8N205 404 aa23.93■■□□□ 1.42
SKP2-208ENST00000546211 FAM177BA6PVY3 158 aa23.92■■□□□ 1.42
SKP2-208ENST00000546211 PHF14O94880 888 aa23.92■■□□□ 1.42
SKP2-208ENST00000546211 CSF1RP07333 972 aa23.92■■□□□ 1.42
SKP2-208ENST00000546211 RFC4P35249 363 aa23.92■■□□□ 1.42
SKP2-208ENST00000546211 CCDC57Q2TAC2 916 aa23.92■■□□□ 1.42
SKP2-208ENST00000546211 SASH1O94885 1247 aa23.91■■□□□ 1.42
SKP2-208ENST00000546211 CTSWP56202 376 aa23.91■■□□□ 1.42
SKP2-208ENST00000546211 SRP68Q9UHB9 627 aaKnown RBP23.91■■□□□ 1.42
SKP2-208ENST00000546211 NTSR2O95665 410 aa23.91■■□□□ 1.42
SKP2-208ENST00000546211 NUTM1Q86Y26 1132 aa23.91■■□□□ 1.42
SKP2-208ENST00000546211 BCL2L12Q9HB09 334 aa23.91■■□□□ 1.42
SKP2-208ENST00000546211 STAP2Q9UGK3 403 aa23.91■■□□□ 1.42
SKP2-208ENST00000546211 AOX1Q06278 1338 aa23.9■■□□□ 1.42
SKP2-208ENST00000546211 GSPT1P15170 499 aaKnown RBP23.9■■□□□ 1.42
SKP2-208ENST00000546211 AMIGO3Q86WK7 504 aa23.9■■□□□ 1.42
SKP2-208ENST00000546211 USP42Q9H9J4 1324 aaKnown RBP23.89■■□□□ 1.42
SKP2-208ENST00000546211 IFIT5Q13325 482 aaKnown RBP23.89■■□□□ 1.41
SKP2-208ENST00000546211 PROM2Q8N271 834 aa23.89■■□□□ 1.41
SKP2-208ENST00000546211 TTLL11Q8NHH1 800 aa23.89■■□□□ 1.41
SKP2-208ENST00000546211 IFIT2P09913 472 aaKnown RBP23.88■■□□□ 1.41
SKP2-208ENST00000546211 SSFA2P28290 1259 aa23.88■■□□□ 1.41
SKP2-208ENST00000546211 TBC1D9BQ66K14 1250 aa23.88■■□□□ 1.41
SKP2-208ENST00000546211 C4AP0C0L4 1744 aa23.87■■□□□ 1.41
SKP2-208ENST00000546211 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.87■■□□□ 1.41
SKP2-208ENST00000546211 TAF7LQ5H9L4 462 aa23.87■■□□□ 1.41
SKP2-208ENST00000546211 BICDL1Q6ZP65 573 aa23.87■■□□□ 1.41
SKP2-208ENST00000546211 CCDC85AQ96PX6 553 aaPredicted RBP23.87■■□□□ 1.41
SKP2-208ENST00000546211 SETDB2Q96T68 719 aa23.87■■□□□ 1.41
SKP2-208ENST00000546211 AACSQ86V21 672 aa23.86■■□□□ 1.41
SKP2-208ENST00000546211 FBXO3Q9UK99 471 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms