RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 FANCAO15360 1455 aa13.45□□□□□ -0.26
CIT-217ENST00000545913 FEZ1Q99689 392 aa13.45□□□□□ -0.26
CIT-217ENST00000545913 SYCP3Q8IZU3 236 aa13.45□□□□□ -0.26
CIT-217ENST00000545913 ANKRD36BQ8N2N9 1353 aa13.45□□□□□ -0.26
CIT-217ENST00000545913 SPECC1Q5M775 1068 aa13.45□□□□□ -0.26
CIT-217ENST00000545913 RMND1Q9NWS8 449 aa13.45□□□□□ -0.26
CIT-217ENST00000545913 TSPY2A6NKD2 308 aa13.45□□□□□ -0.26
CIT-217ENST00000545913 PHF8Q9UPP1 1060 aa13.45□□□□□ -0.26
CIT-217ENST00000545913 PLB1Q6P1J6 1458 aa13.45□□□□□ -0.26
CIT-217ENST00000545913 GIGYF2Q6Y7W6 1299 aaKnown RBP13.45□□□□□ -0.26
CIT-217ENST00000545913 C16orf45Q96MC5 204 aaPredicted RBP13.45□□□□□ -0.26
CIT-217ENST00000545913 BCCIPQ9P287 314 aaKnown RBP eCLIP13.45□□□□□ -0.26
CIT-217ENST00000545913 HLTFQ14527 1009 aaKnown RBP eCLIP13.45□□□□□ -0.26
CIT-217ENST00000545913 PPP4R3BQ5MIZ7 849 aa13.45□□□□□ -0.26
CIT-217ENST00000545913 DDX46Q7L014 1031 aaKnown RBP13.45□□□□□ -0.26
CIT-217ENST00000545913 DDX12PQ92771 950 aa13.44□□□□□ -0.26
CIT-217ENST00000545913 GSTO1P78417 241 aa13.44□□□□□ -0.26
CIT-217ENST00000545913 BBXQ8WY36 941 aaPredicted RBP13.44□□□□□ -0.26
CIT-217ENST00000545913 IBSPP21815 317 aaPredicted RBP13.44□□□□□ -0.26
CIT-217ENST00000545913 CCDC40Q4G0X9 1142 aa13.44□□□□□ -0.26
CIT-217ENST00000545913 NEK1Q96PY6 1258 aa13.44□□□□□ -0.26
CIT-217ENST00000545913 PLVAPQ9BX97 442 aa13.44□□□□□ -0.26
CIT-217ENST00000545913 LDHAL6AQ6ZMR3 332 aa13.44□□□□□ -0.26
CIT-217ENST00000545913 TMC6Q7Z403 805 aa13.44□□□□□ -0.26
CIT-217ENST00000545913 TBC1D2Q9BYX2 928 aa13.44□□□□□ -0.26
CIT-217ENST00000545913 EXOC5O00471 708 aa13.44□□□□□ -0.26
CIT-217ENST00000545913 CCDC175P0C221 793 aa13.44□□□□□ -0.26
CIT-217ENST00000545913 MICU3Q86XE3 530 aa13.44□□□□□ -0.26
CIT-217ENST00000545913 DUOX2Q9NRD8 1548 aa13.44□□□□□ -0.26
CIT-217ENST00000545913 BMP15O95972 392 aa13.44□□□□□ -0.26
CIT-217ENST00000545913 TTLL12Q14166 644 aaPredicted RBP13.44□□□□□ -0.26
CIT-217ENST00000545913 UBE3BQ7Z3V4 1068 aa13.44□□□□□ -0.26
CIT-217ENST00000545913 ZGPATQ8N5A5 531 aaKnown RBP13.44□□□□□ -0.26
CIT-217ENST00000545913 DRC1Q96MC2 740 aa13.44□□□□□ -0.26
CIT-217ENST00000545913 USP16Q9Y5T5 823 aa13.44□□□□□ -0.26
CIT-217ENST00000545913 TCERG1LQ5VWI1 586 aa13.43□□□□□ -0.26
CIT-217ENST00000545913 CCDC102BQ68D86 513 aa13.43□□□□□ -0.26
CIT-217ENST00000545913 NOS1P29475 1434 aa13.43□□□□□ -0.26
CIT-217ENST00000545913 EXOC1Q9NV70 894 aa13.43□□□□□ -0.26
CIT-217ENST00000545913 CRNKL1Q9BZJ0 848 aaKnown RBP13.43□□□□□ -0.26
CIT-217ENST00000545913 AMOTL2Q9Y2J4 779 aa13.43□□□□□ -0.26
CIT-217ENST00000545913 ADCY5O95622 1261 aa13.43□□□□□ -0.26
CIT-217ENST00000545913 C20orf194Q5TEA3 1177 aa13.43□□□□□ -0.26
CIT-217ENST00000545913 CTR9Q6PD62 1173 aa13.43□□□□□ -0.26
CIT-217ENST00000545913 PPM1EQ8WY54 764 aa13.43□□□□□ -0.26
CIT-217ENST00000545913 SNW1Q13573 536 aaKnown RBP13.43□□□□□ -0.26
CIT-217ENST00000545913 FSD2A1L4K1 749 aa13.43□□□□□ -0.26
CIT-217ENST00000545913 ZNF165P49910 485 aa13.43□□□□□ -0.26
CIT-217ENST00000545913 CHMP4BP1P59074 171 aa13.43□□□□□ -0.26
CIT-217ENST00000545913 WDR78Q5VTH9 848 aa13.43□□□□□ -0.26
CIT-217ENST00000545913 CTAGE1Q96RT6 745 aa13.43□□□□□ -0.26
CIT-217ENST00000545913 KRT23Q9C075 422 aa13.43□□□□□ -0.26
CIT-217ENST00000545913 PAXBP1Q9Y5B6 917 aa13.43□□□□□ -0.26
CIT-217ENST00000545913 SSFA2P28290 1259 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 IFNL2Q8IZJ0 200 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 USP25Q9UHP3 1055 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 CFAP43Q8NDM7 1665 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 NBPF7P0C2Y1 421 aaPredicted RBP13.42□□□□□ -0.26
CIT-217ENST00000545913 NOP2P46087 812 aaKnown RBP13.42□□□□□ -0.26
CIT-217ENST00000545913 TMTC2Q8N394 836 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 TMCO5BA8MYB1 307 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 C6orf229H3BNL8 230 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 DNA2P51530 1060 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 TTC22Q5TAA0 569 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 GIMAP7Q8NHV1 300 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 KDM5BQ9UGL1 1544 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 ZFYP08048 801 aaPredicted RBP13.42□□□□□ -0.26
CIT-217ENST00000545913 TBC1D5Q92609 795 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 SAMM50Q9Y512 469 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 FOXO3O43524 673 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 EMILIN1Q9Y6C2 1016 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 TRAF1Q13077 416 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 CCDC152Q4G0S7 254 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 USP37Q86T82 979 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 CCDC144CPQ8IYA2 1237 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 ERMNQ8TAM6 284 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 CNNM2Q9H8M5 875 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 CABP5Q9NP86 173 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 CALCOCO1Q9P1Z2 691 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 GPTP24298 496 aa13.42□□□□□ -0.26
CIT-217ENST00000545913 MYO1BO43795 1136 aa13.41□□□□□ -0.26
CIT-217ENST00000545913 ST5P78524 1137 aa13.41□□□□□ -0.26
CIT-217ENST00000545913 JADE2Q9NQC1 790 aa13.41□□□□□ -0.26
CIT-217ENST00000545913 TRMT1Q9NXH9 659 aaKnown RBP13.41□□□□□ -0.26
CIT-217ENST00000545913 UVSSAQ2YD98 709 aa13.41□□□□□ -0.26
CIT-217ENST00000545913 CCDC174Q6PII3 467 aa13.41□□□□□ -0.26
CIT-217ENST00000545913 SNRPA1P09661 255 aaKnown RBP13.41□□□□□ -0.26
CIT-217ENST00000545913 UQCRFS1P1P0C7P4 283 aa13.41□□□□□ -0.26
CIT-217ENST00000545913 TMEM87AQ8NBN3 555 aa13.41□□□□□ -0.26
CIT-217ENST00000545913 ORC3Q9UBD5 711 aaPredicted RBP13.41□□□□□ -0.26
CIT-217ENST00000545913 KCNG4Q8TDN1 519 aa13.41□□□□□ -0.26
CIT-217ENST00000545913 SLC26A6Q9BXS9 759 aa13.41□□□□□ -0.26
CIT-217ENST00000545913 UBE4AQ14139 1066 aa13.41□□□□□ -0.26
CIT-217ENST00000545913 SPECC1LQ69YQ0 1117 aa13.41□□□□□ -0.26
CIT-217ENST00000545913 PRPF4BQ13523 1007 aaKnown RBP13.41□□□□□ -0.26
CIT-217ENST00000545913 DHX37Q8IY37 1157 aaKnown RBP13.4□□□□□ -0.26
CIT-217ENST00000545913 DENND4BO75064 1496 aaPredicted RBP13.4□□□□□ -0.26
CIT-217ENST00000545913 BIN1O00499 593 aa13.4□□□□□ -0.26
CIT-217ENST00000545913 SYKP43405 635 aa13.4□□□□□ -0.26
CIT-217ENST00000545913 CPLX3Q8WVH0 158 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 798.1 ms