RNA–Protein interactions for RNA: ENST00000545723.1

ATF7IP-223, Transcript of activating transcription factor 7 interacting protein, human

TSL 4

Gene ATF7IP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATF7IP-223	ENST00000545723	PLBD2	Q8NHP8	589 aa		18.83	■□□□□ 0.6
ATF7IP-223	ENST00000545723	PHAX	Q9H814	394 aa	Known RBP	18.83	■□□□□ 0.6
ATF7IP-223	ENST00000545723	HYPK	Q9NX55	129 aa		18.83	■□□□□ 0.6
ATF7IP-223	ENST00000545723	TNRC6C	Q9HCJ0	1690 aa	Known RBP	18.82	■□□□□ 0.6
ATF7IP-223	ENST00000545723	ATP5J2-PTCD1	G3V325	749 aa		18.82	■□□□□ 0.6
ATF7IP-223	ENST00000545723	ALDH1B1	P30837	517 aa		18.82	■□□□□ 0.6
ATF7IP-223	ENST00000545723	CRY2	Q49AN0	593 aa		18.82	■□□□□ 0.6
ATF7IP-223	ENST00000545723	HSP90AB3P	Q58FF7	597 aa		18.82	■□□□□ 0.6
ATF7IP-223	ENST00000545723	SLC51A	Q86UW1	340 aa		18.82	■□□□□ 0.6
ATF7IP-223	ENST00000545723	TAOK3	Q9H2K8	898 aa		18.82	■□□□□ 0.6
ATF7IP-223	ENST00000545723	RRAGC	Q9HB90	399 aa		18.82	■□□□□ 0.6
ATF7IP-223	ENST00000545723	TCERG1	O14776	1098 aa	Known RBP	18.81	■□□□□ 0.6
ATF7IP-223	ENST00000545723	HCLS1	P14317	486 aa	Predicted RBP	18.81	■□□□□ 0.6
ATF7IP-223	ENST00000545723	RPGR	Q92834	1020 aa	Known RBP	18.81	■□□□□ 0.6
ATF7IP-223	ENST00000545723	TRMT112	Q9UI30	125 aa	Known RBP	18.81	■□□□□ 0.6
ATF7IP-223	ENST00000545723	CCDC88A	Q3V6T2	1871 aa		18.81	■□□□□ 0.6
ATF7IP-223	ENST00000545723	IBTK	Q9P2D0	1353 aa	Predicted RBP	18.81	■□□□□ 0.6
ATF7IP-223	ENST00000545723	CCDC93	Q567U6	631 aa		18.8	■□□□□ 0.6
ATF7IP-223	ENST00000545723	SLC10A5	Q5PT55	438 aa		18.8	■□□□□ 0.6
ATF7IP-223	ENST00000545723	KDM2B	Q8NHM5	1336 aa		18.79	■□□□□ 0.6
ATF7IP-223	ENST00000545723	HOXA10	P31260	410 aa	Predicted RBP	18.79	■□□□□ 0.6
ATF7IP-223	ENST00000545723	SOGA3	Q5TF21	947 aa		18.79	■□□□□ 0.6
ATF7IP-223	ENST00000545723	RBM17	Q96I25	401 aa	Known RBP	18.79	■□□□□ 0.6
ATF7IP-223	ENST00000545723	NLRP3	Q96P20	1036 aa		18.79	■□□□□ 0.6
ATF7IP-223	ENST00000545723	FER1L6	Q2WGJ9	1857 aa		18.79	■□□□□ 0.6
ATF7IP-223	ENST00000545723	RIC3	Q7Z5B4	369 aa		18.78	■□□□□ 0.6
ATF7IP-223	ENST00000545723	ISCA1	Q9BUE6	129 aa		18.78	■□□□□ 0.6
ATF7IP-223	ENST00000545723	ZNF277	Q9NRM2	450 aa	Predicted RBP	18.78	■□□□□ 0.6
ATF7IP-223	ENST00000545723	LTBP3	Q9NS15	1303 aa		18.77	■□□□□ 0.6
ATF7IP-223	ENST00000545723	GLTPD2	A6NH11	291 aa		18.77	■□□□□ 0.6
ATF7IP-223	ENST00000545723	RTL5	Q5HYW3	569 aa	Predicted RBP	18.77	■□□□□ 0.6
ATF7IP-223	ENST00000545723	CCDC30	Q5VVM6	783 aa		18.77	■□□□□ 0.6
ATF7IP-223	ENST00000545723	FKBP4	Q02790	459 aa	Known RBP eCLIP	18.76	■□□□□ 0.59
ATF7IP-223	ENST00000545723	GOLGA2	Q08379	1002 aa		18.76	■□□□□ 0.59
ATF7IP-223	ENST00000545723	RTKN2	Q8IZC4	609 aa		18.76	■□□□□ 0.59
ATF7IP-223	ENST00000545723	FAM89A	Q96GI7	184 aa		18.76	■□□□□ 0.59
ATF7IP-223	ENST00000545723	CRAMP1	Q96RY5	1269 aa		18.76	■□□□□ 0.59
ATF7IP-223	ENST00000545723	ARFGEF2	Q9Y6D5	1785 aa		18.76	■□□□□ 0.59
ATF7IP-223	ENST00000545723	IL16	Q14005	1332 aa		18.75	■□□□□ 0.59
ATF7IP-223	ENST00000545723	SH3TC1	Q8TE82	1336 aa		18.75	■□□□□ 0.59
ATF7IP-223	ENST00000545723	ZC3H4	Q9UPT8	1303 aa	Known RBP	18.75	■□□□□ 0.59
ATF7IP-223	ENST00000545723	RIC1	Q4ADV7	1423 aa		18.75	■□□□□ 0.59
ATF7IP-223	ENST00000545723	TOMM70	O94826	608 aa		18.75	■□□□□ 0.59
ATF7IP-223	ENST00000545723	TWISTNB	Q3B726	338 aa	Predicted RBP	18.75	■□□□□ 0.59
ATF7IP-223	ENST00000545723	SPINK5	Q9NQ38	1064 aa	Predicted RBP	18.75	■□□□□ 0.59
ATF7IP-223	ENST00000545723	PPEF1	O14829	653 aa	Predicted RBP	18.74	■□□□□ 0.59
ATF7IP-223	ENST00000545723	NCBP3	Q53F19	620 aa	Known RBP	18.74	■□□□□ 0.59
ATF7IP-223	ENST00000545723	DPY19L2	Q6NUT2	758 aa		18.74	■□□□□ 0.59
ATF7IP-223	ENST00000545723	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.74	■□□□□ 0.59
ATF7IP-223	ENST00000545723	MYD88	Q99836	296 aa		18.74	■□□□□ 0.59
ATF7IP-223	ENST00000545723	FANCI	Q9NVI1	1328 aa		18.74	■□□□□ 0.59
ATF7IP-223	ENST00000545723	ANKRD36C	Q5JPF3	1778 aa		18.73	■□□□□ 0.59
ATF7IP-223	ENST00000545723	WDR63	Q8IWG1	891 aa		18.73	■□□□□ 0.59
ATF7IP-223	ENST00000545723	JARID2	Q92833	1246 aa	Predicted RBP	18.73	■□□□□ 0.59
ATF7IP-223	ENST00000545723	RNF123	Q5XPI4	1314 aa		18.73	■□□□□ 0.59
ATF7IP-223	ENST00000545723	POTEC	B2RU33	542 aa		18.72	■□□□□ 0.59
ATF7IP-223	ENST00000545723	DDN	O94850	711 aa	Predicted RBP	18.72	■□□□□ 0.59
ATF7IP-223	ENST00000545723	TRIM28	Q13263	835 aa	Known RBP	18.72	■□□□□ 0.59
ATF7IP-223	ENST00000545723	G2E3	Q7L622	706 aa		18.72	■□□□□ 0.59
ATF7IP-223	ENST00000545723	ABCC4	O15439	1325 aa		18.72	■□□□□ 0.59
ATF7IP-223	ENST00000545723	TIAM2	Q8IVF5	1701 aa		18.71	■□□□□ 0.59
ATF7IP-223	ENST00000545723	SLC4A2	P04920	1241 aa		18.71	■□□□□ 0.59
ATF7IP-223	ENST00000545723	VEGFA	P15692	232 aa	Predicted RBP	18.71	■□□□□ 0.59
ATF7IP-223	ENST00000545723	EXOSC9	Q06265	439 aa	Known RBP	18.71	■□□□□ 0.59
ATF7IP-223	ENST00000545723	STK31	Q9BXU1	1019 aa		18.71	■□□□□ 0.59
ATF7IP-223	ENST00000545723	MAP3K2	Q9Y2U5	619 aa		18.71	■□□□□ 0.59
ATF7IP-223	ENST00000545723	HSPA6	P17066	643 aa		18.7	■□□□□ 0.58
ATF7IP-223	ENST00000545723	IARS	P41252	1262 aa	Known RBP	18.7	■□□□□ 0.58
ATF7IP-223	ENST00000545723	DDX46	Q7L014	1031 aa	Known RBP	18.7	■□□□□ 0.58
ATF7IP-223	ENST00000545723	CHMP4A	Q9BY43	222 aa		18.7	■□□□□ 0.58
ATF7IP-223	ENST00000545723	DICER1	Q9UPY3	1922 aa	Known RBP	18.69	■□□□□ 0.58
ATF7IP-223	ENST00000545723	SNED1	Q8TER0	1413 aa		18.69	■□□□□ 0.58
ATF7IP-223	ENST00000545723	CEP350	Q5VT06	3117 aa		18.69	■□□□□ 0.58
ATF7IP-223	ENST00000545723	PI4KAP2	A4QPH2	592 aa		18.69	■□□□□ 0.58
ATF7IP-223	ENST00000545723	IRS4	O14654	1257 aa	Predicted RBP	18.69	■□□□□ 0.58
ATF7IP-223	ENST00000545723	VAMP4	O75379	141 aa		18.69	■□□□□ 0.58
ATF7IP-223	ENST00000545723	DDX58	O95786	925 aa	Known RBP	18.69	■□□□□ 0.58
ATF7IP-223	ENST00000545723	CC2D2B	Q6DHV5	1058 aa		18.69	■□□□□ 0.58
ATF7IP-223	ENST00000545723	PI4KAP1	Q8N8J0	262 aa		18.69	■□□□□ 0.58
ATF7IP-223	ENST00000545723	RBM46	Q8TBY0	533 aa	Known RBP	18.69	■□□□□ 0.58
ATF7IP-223	ENST00000545723	PSMD1	Q99460	953 aa		18.69	■□□□□ 0.58
ATF7IP-223	ENST00000545723	METTL22	Q9BUU2	404 aa	Predicted RBP	18.69	■□□□□ 0.58
ATF7IP-223	ENST00000545723	ATP6V0A2	Q9Y487	856 aa		18.69	■□□□□ 0.58
ATF7IP-223	ENST00000545723	BBOX1	O75936	387 aa		18.68	■□□□□ 0.58
ATF7IP-223	ENST00000545723	KSR2	Q6VAB6	950 aa		18.68	■□□□□ 0.58
ATF7IP-223	ENST00000545723	ZNF541	Q9H0D2	1346 aa		18.68	■□□□□ 0.58
ATF7IP-223	ENST00000545723	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.67	■□□□□ 0.58
ATF7IP-223	ENST00000545723	LAMB2	P55268	1798 aa		18.67	■□□□□ 0.58
ATF7IP-223	ENST00000545723	TAF1	P21675	1872 aa		18.67	■□□□□ 0.58
ATF7IP-223	ENST00000545723	IGKV5-2	P06315	115 aa		18.66	■□□□□ 0.58
ATF7IP-223	ENST00000545723	GRAP	Q13588	217 aa		18.66	■□□□□ 0.58
ATF7IP-223	ENST00000545723	SF3B3	Q15393	1217 aa	Known RBP	18.66	■□□□□ 0.58
ATF7IP-223	ENST00000545723	SP8	Q8IXZ3	490 aa		18.66	■□□□□ 0.58
ATF7IP-223	ENST00000545723	CCDC191	Q8NCU4	936 aa		18.66	■□□□□ 0.58
ATF7IP-223	ENST00000545723	GRAPL	Q8TC17	118 aa	Predicted RBP	18.66	■□□□□ 0.58
ATF7IP-223	ENST00000545723	CELF1	Q92879	486 aa	Known RBP	18.66	■□□□□ 0.58
ATF7IP-223	ENST00000545723	TMX4	Q9H1E5	349 aa	Predicted RBP	18.66	■□□□□ 0.58
ATF7IP-223	ENST00000545723	CWC25	Q9NXE8	425 aa	Predicted RBP	18.66	■□□□□ 0.58
ATF7IP-223	ENST00000545723	LARGE2	Q8N3Y3	721 aa		18.65	■□□□□ 0.58
ATF7IP-223	ENST00000545723	JDP2	Q8WYK2	163 aa		18.65	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms