RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 PCCAP05165 728 aaPredicted RBP17.15■□□□□ 0.34
SCARB1-209ENST00000545305 SSFA2P28290 1259 aa17.15■□□□□ 0.34
SCARB1-209ENST00000545305 MTX1Q13505 466 aa17.15■□□□□ 0.34
SCARB1-209ENST00000545305 PPP1R42Q7Z4L9 355 aa17.15■□□□□ 0.34
SCARB1-209ENST00000545305 ZNF34Q8IZ26 560 aa17.15■□□□□ 0.34
SCARB1-209ENST00000545305 BICC1Q9H694 974 aaKnown RBP17.15■□□□□ 0.34
SCARB1-209ENST00000545305 ZBTB47Q9UFB7 747 aaPredicted RBP17.15■□□□□ 0.34
SCARB1-209ENST00000545305 PNMA6EA0A0J9YXQ4 647 aa17.14■□□□□ 0.33
SCARB1-209ENST00000545305 SRGAP3O43295 1099 aa17.14■□□□□ 0.33
SCARB1-209ENST00000545305 BAG6P46379 1132 aa17.14■□□□□ 0.33
SCARB1-209ENST00000545305 CASP7P55210 303 aa17.14■□□□□ 0.33
SCARB1-209ENST00000545305 PROM2Q8N271 834 aa17.14■□□□□ 0.33
SCARB1-209ENST00000545305 ZBTB38Q8NAP3 1195 aaPredicted RBP17.14■□□□□ 0.33
SCARB1-209ENST00000545305 ARHGEF1Q92888 912 aaKnown RBP17.14■□□□□ 0.33
SCARB1-209ENST00000545305 NIP7Q9Y221 180 aaKnown RBP eCLIP17.14■□□□□ 0.33
SCARB1-209ENST00000545305 EP400Q96L91 3159 aa17.14■□□□□ 0.33
SCARB1-209ENST00000545305 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.13■□□□□ 0.33
SCARB1-209ENST00000545305 POLA2Q14181 598 aa17.13■□□□□ 0.33
SCARB1-209ENST00000545305 RTL5Q5HYW3 569 aaPredicted RBP17.13■□□□□ 0.33
SCARB1-209ENST00000545305 USPL1Q5W0Q7 1092 aa17.13■□□□□ 0.33
SCARB1-209ENST00000545305 SSH3Q8TE77 659 aa17.13■□□□□ 0.33
SCARB1-209ENST00000545305 JARID2Q92833 1246 aaPredicted RBP17.13■□□□□ 0.33
SCARB1-209ENST00000545305 DCTPP1Q9H773 170 aa17.13■□□□□ 0.33
SCARB1-209ENST00000545305 TRMT112Q9UI30 125 aaKnown RBP17.13■□□□□ 0.33
SCARB1-209ENST00000545305 PDZRN3Q9UPQ7 1066 aa17.13■□□□□ 0.33
SCARB1-209ENST00000545305 UBN2Q6ZU65 1347 aa17.13■□□□□ 0.33
SCARB1-209ENST00000545305 CDHR2Q9BYE9 1310 aa17.13■□□□□ 0.33
SCARB1-209ENST00000545305 USP42Q9H9J4 1324 aaKnown RBP17.13■□□□□ 0.33
SCARB1-209ENST00000545305 SMIM5Q71RC9 77 aa17.12■□□□□ 0.33
SCARB1-209ENST00000545305 KAZALD1Q96I82 304 aa17.12■□□□□ 0.33
SCARB1-209ENST00000545305 UTP14AQ9BVJ6 771 aaKnown RBP17.12■□□□□ 0.33
SCARB1-209ENST00000545305 SRP68Q9UHB9 627 aaKnown RBP17.12■□□□□ 0.33
SCARB1-209ENST00000545305 HSP90B1P14625 803 aaKnown RBP17.11■□□□□ 0.33
SCARB1-209ENST00000545305 RABL6Q3YEC7 729 aaPredicted RBP17.11■□□□□ 0.33
SCARB1-209ENST00000545305 AMIGO3Q86WK7 504 aa17.11■□□□□ 0.33
SCARB1-209ENST00000545305 TFCP2L1Q9NZI6 479 aa17.11■□□□□ 0.33
SCARB1-209ENST00000545305 NUCB1Q02818 461 aa17.1■□□□□ 0.33
SCARB1-209ENST00000545305 EN1Q05925 392 aaPredicted RBP17.1■□□□□ 0.33
SCARB1-209ENST00000545305 HSP90AB4PQ58FF6 505 aa17.1■□□□□ 0.33
SCARB1-209ENST00000545305 ANKRD45Q5TZF3 282 aa17.1■□□□□ 0.33
SCARB1-209ENST00000545305 FLAD1Q8NFF5 587 aa17.1■□□□□ 0.33
SCARB1-209ENST00000545305 AKT1S1Q96B36 256 aa17.1■□□□□ 0.33
SCARB1-209ENST00000545305 FAM89AQ96GI7 184 aa17.1■□□□□ 0.33
SCARB1-209ENST00000545305 SH3TC1Q8TE82 1336 aa17.1■□□□□ 0.33
SCARB1-209ENST00000545305 EZH2Q15910 746 aaKnown RBP17.09■□□□□ 0.33
SCARB1-209ENST00000545305 ZNF827Q17R98 1081 aa17.09■□□□□ 0.33
SCARB1-209ENST00000545305 EPHA10Q5JZY3 1008 aa17.09■□□□□ 0.33
SCARB1-209ENST00000545305 SUSD4Q5VX71 490 aa17.09■□□□□ 0.33
SCARB1-209ENST00000545305 CHD1LQ86WJ1 897 aa17.09■□□□□ 0.33
SCARB1-209ENST00000545305 CCDC125Q86Z20 511 aa17.09■□□□□ 0.33
SCARB1-209ENST00000545305 CAMKK2Q96RR4 588 aa17.09■□□□□ 0.33
SCARB1-209ENST00000545305 PLA2G12BQ9BX93 195 aa17.09■□□□□ 0.33
SCARB1-209ENST00000545305 BCL2L12Q9HB09 334 aa17.09■□□□□ 0.33
SCARB1-209ENST00000545305 CHMP3Q9Y3E7 222 aa17.09■□□□□ 0.33
SCARB1-209ENST00000545305 COL24A1Q17RW2 1714 aa17.08■□□□□ 0.32
SCARB1-209ENST00000545305 FAM177BA6PVY3 158 aa17.08■□□□□ 0.32
SCARB1-209ENST00000545305 IRS4O14654 1257 aaPredicted RBP17.08■□□□□ 0.32
SCARB1-209ENST00000545305 SURF6O75683 361 aaKnown RBP17.08■□□□□ 0.32
SCARB1-209ENST00000545305 RGS3P49796 1198 aa17.08■□□□□ 0.32
SCARB1-209ENST00000545305 FOXO4P98177 505 aa17.08■□□□□ 0.32
SCARB1-209ENST00000545305 OS9Q13438 667 aaPredicted RBP17.08■□□□□ 0.32
SCARB1-209ENST00000545305 TBC1D9BQ66K14 1250 aa17.08■□□□□ 0.32
SCARB1-209ENST00000545305 LMBR1LQ6UX01 489 aa17.08■□□□□ 0.32
SCARB1-209ENST00000545305 BICDL1Q6ZP65 573 aa17.08■□□□□ 0.32
SCARB1-209ENST00000545305 SETDB2Q96T68 719 aa17.08■□□□□ 0.32
SCARB1-209ENST00000545305 NYXQ9GZU5 481 aa17.08■□□□□ 0.32
SCARB1-209ENST00000545305 EXOC6BQ9Y2D4 811 aa17.08■□□□□ 0.32
SCARB1-209ENST00000545305 LAMB2P55268 1798 aa17.07■□□□□ 0.32
SCARB1-209ENST00000545305 APBB1O00213 710 aa17.07■□□□□ 0.32
SCARB1-209ENST00000545305 PDE8AO60658 829 aa17.07■□□□□ 0.32
SCARB1-209ENST00000545305 RAB11FIP3O75154 756 aa17.07■□□□□ 0.32
SCARB1-209ENST00000545305 NTSR2O95665 410 aa17.07■□□□□ 0.32
SCARB1-209ENST00000545305 LNPKQ9C0E8 428 aa17.07■□□□□ 0.32
SCARB1-209ENST00000545305 STK32BQ9NY57 414 aa17.07■□□□□ 0.32
SCARB1-209ENST00000545305 TUBGCP6Q96RT7 1819 aa17.07■□□□□ 0.32
SCARB1-209ENST00000545305 MYH3P11055 1940 aa17.06■□□□□ 0.32
SCARB1-209ENST00000545305 ERC1Q8IUD2 1116 aa17.06■□□□□ 0.32
SCARB1-209ENST00000545305 LRRCC1Q9C099 1032 aa17.06■□□□□ 0.32
SCARB1-209ENST00000545305 CARMIL3Q8ND23 1372 aa17.05■□□□□ 0.32
SCARB1-209ENST00000545305 MSH5O43196 834 aa17.05■□□□□ 0.32
SCARB1-209ENST00000545305 GTF2E1P29083 439 aaPredicted RBP17.05■□□□□ 0.32
SCARB1-209ENST00000545305 CTSWP56202 376 aa17.05■□□□□ 0.32
SCARB1-209ENST00000545305 SKAP1Q86WV1 359 aa17.05■□□□□ 0.32
SCARB1-209ENST00000545305 NBPF5PQ86XG9 351 aaPredicted RBP17.05■□□□□ 0.32
SCARB1-209ENST00000545305 NOP58Q9Y2X3 529 aaKnown RBP17.05■□□□□ 0.32
SCARB1-209ENST00000545305 NPHP1O15259 732 aa17.04■□□□□ 0.32
SCARB1-209ENST00000545305 GYS1P13807 737 aa17.04■□□□□ 0.32
SCARB1-209ENST00000545305 G3BP1Q13283 466 aaKnown RBP eCLIP17.04■□□□□ 0.32
SCARB1-209ENST00000545305 KIF1BPQ96EK5 621 aa17.04■□□□□ 0.32
SCARB1-209ENST00000545305 CCDC57Q2TAC2 916 aa17.03■□□□□ 0.32
SCARB1-209ENST00000545305 DEFB132Q7Z7B7 95 aa17.03■□□□□ 0.32
SCARB1-209ENST00000545305 SYNE4Q8N205 404 aa17.03■□□□□ 0.32
SCARB1-209ENST00000545305 COPRSQ9NQ92 184 aa17.03■□□□□ 0.32
SCARB1-209ENST00000545305 PA2G4Q9UQ80 394 aaKnown RBP17.03■□□□□ 0.32
SCARB1-209ENST00000545305 DDX60Q8IY21 1712 aaKnown RBP17.03■□□□□ 0.32
SCARB1-209ENST00000545305 QSER1Q2KHR3 1735 aa17.02■□□□□ 0.32
SCARB1-209ENST00000545305 CSF1RP07333 972 aa17.02■□□□□ 0.32
SCARB1-209ENST00000545305 HCLS1P14317 486 aaPredicted RBP17.02■□□□□ 0.32
SCARB1-209ENST00000545305 RFX5P48382 616 aaPredicted RBP17.02■□□□□ 0.32
SCARB1-209ENST00000545305 NFIXQ14938 502 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms