RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 NFIXQ14938 502 aa17.58■□□□□ 0.4
TSEN54-203ENST00000545228 PPP1R42Q7Z4L9 355 aa17.58■□□□□ 0.4
TSEN54-203ENST00000545228 C16orf71Q8IYS4 520 aaPredicted RBP17.58■□□□□ 0.4
TSEN54-203ENST00000545228 ARHGAP45Q92619 1136 aa17.58■□□□□ 0.4
TSEN54-203ENST00000545228 RNF181Q9P0P0 153 aa17.58■□□□□ 0.4
TSEN54-203ENST00000545228 RCAN3Q9UKA8 241 aa17.58■□□□□ 0.4
TSEN54-203ENST00000545228 NIP7Q9Y221 180 aaKnown RBP eCLIP17.58■□□□□ 0.4
TSEN54-203ENST00000545228 KDM2BQ8NHM5 1336 aa17.57■□□□□ 0.4
TSEN54-203ENST00000545228 DNAAF4Q8WXU2 420 aa17.57■□□□□ 0.4
TSEN54-203ENST00000545228 NRXN2Q9P2S2 1712 aa17.57■□□□□ 0.4
TSEN54-203ENST00000545228 CEP350Q5VT06 3117 aa17.56■□□□□ 0.4
TSEN54-203ENST00000545228 PI4KAP2A4QPH2 592 aa17.56■□□□□ 0.4
TSEN54-203ENST00000545228 TCIRG1Q13488 830 aa17.56■□□□□ 0.4
TSEN54-203ENST00000545228 PI4KAP1Q8N8J0 262 aa17.56■□□□□ 0.4
TSEN54-203ENST00000545228 RBM46Q8TBY0 533 aaKnown RBP17.56■□□□□ 0.4
TSEN54-203ENST00000545228 METTL22Q9BUU2 404 aaPredicted RBP17.56■□□□□ 0.4
TSEN54-203ENST00000545228 BCL2L13Q9BXK5 485 aa17.56■□□□□ 0.4
TSEN54-203ENST00000545228 MAP3K2Q9Y2U5 619 aa17.56■□□□□ 0.4
TSEN54-203ENST00000545228 SERPINB2P05120 415 aa17.55■□□□□ 0.4
TSEN54-203ENST00000545228 GTF2E1P29083 439 aaPredicted RBP17.55■□□□□ 0.4
TSEN54-203ENST00000545228 ST5P78524 1137 aa17.55■□□□□ 0.4
TSEN54-203ENST00000545228 TPTE2Q6XPS3 522 aa17.55■□□□□ 0.4
TSEN54-203ENST00000545228 BCL2L12Q9HB09 334 aa17.55■□□□□ 0.4
TSEN54-203ENST00000545228 TRIM28Q13263 835 aaKnown RBP17.54■□□□□ 0.4
TSEN54-203ENST00000545228 HLFQ16534 295 aa17.54■□□□□ 0.4
TSEN54-203ENST00000545228 ZKSCAN2Q63HK3 967 aa17.54■□□□□ 0.4
TSEN54-203ENST00000545228 TBC1D9BQ66K14 1250 aa17.54■□□□□ 0.4
TSEN54-203ENST00000545228 BICDL1Q6ZP65 573 aa17.54■□□□□ 0.4
TSEN54-203ENST00000545228 NBPF5PQ86XG9 351 aaPredicted RBP17.54■□□□□ 0.4
TSEN54-203ENST00000545228 CCDC191Q8NCU4 936 aa17.54■□□□□ 0.4
TSEN54-203ENST00000545228 G2E3Q7L622 706 aa17.53■□□□□ 0.4
TSEN54-203ENST00000545228 ZNF34Q8IZ26 560 aa17.53■□□□□ 0.4
TSEN54-203ENST00000545228 CNBD1Q8NA66 436 aa17.53■□□□□ 0.4
TSEN54-203ENST00000545228 LINS1Q8NG48 757 aa17.53■□□□□ 0.4
TSEN54-203ENST00000545228 MYD88Q99836 296 aa17.53■□□□□ 0.4
TSEN54-203ENST00000545228 PDZRN3Q9UPQ7 1066 aa17.53■□□□□ 0.4
TSEN54-203ENST00000545228 LAMB2P55268 1798 aa17.53■□□□□ 0.4
TSEN54-203ENST00000545228 FSTL1Q12841 308 aa17.52■□□□□ 0.4
TSEN54-203ENST00000545228 FTSJ3Q8IY81 847 aaKnown RBP17.52■□□□□ 0.4
TSEN54-203ENST00000545228 FRAT1Q92837 279 aaPredicted RBP17.52■□□□□ 0.4
TSEN54-203ENST00000545228 RRAGCQ9HB90 399 aa17.52■□□□□ 0.4
TSEN54-203ENST00000545228 CWC25Q9NXE8 425 aaPredicted RBP17.52■□□□□ 0.4
TSEN54-203ENST00000545228 NOB1Q9ULX3 412 aaKnown RBP17.52■□□□□ 0.4
TSEN54-203ENST00000545228 HDAC5Q9UQL6 1122 aa17.52■□□□□ 0.4
TSEN54-203ENST00000545228 MYH3P11055 1940 aa17.52■□□□□ 0.4
TSEN54-203ENST00000545228 ALDH1L1O75891 902 aa17.51■□□□□ 0.39
TSEN54-203ENST00000545228 GPTP24298 496 aa17.51■□□□□ 0.39
TSEN54-203ENST00000545228 CCT4P50991 539 aaKnown RBP17.51■□□□□ 0.39
TSEN54-203ENST00000545228 SLC4A10Q6U841 1118 aa17.51■□□□□ 0.39
TSEN54-203ENST00000545228 ATF7IPQ6VMQ6 1270 aa17.51■□□□□ 0.39
TSEN54-203ENST00000545228 DNAJC5GQ8N7S2 189 aa17.51■□□□□ 0.39
TSEN54-203ENST00000545228 TTLL6Q8N841 843 aa17.51■□□□□ 0.39
TSEN54-203ENST00000545228 ISCA1Q9BUE6 129 aa17.51■□□□□ 0.39
TSEN54-203ENST00000545228 UTP14AQ9BVJ6 771 aaKnown RBP17.51■□□□□ 0.39
TSEN54-203ENST00000545228 SRCIN1Q9C0H9 1055 aa17.51■□□□□ 0.39
TSEN54-203ENST00000545228 ZC3H4Q9UPT8 1303 aaKnown RBP17.5■□□□□ 0.39
TSEN54-203ENST00000545228 RIC1Q4ADV7 1423 aa17.5■□□□□ 0.39
TSEN54-203ENST00000545228 H0YIN7 160 aa17.5■□□□□ 0.39
TSEN54-203ENST00000545228 RASSF7Q02833 373 aa17.5■□□□□ 0.39
TSEN54-203ENST00000545228 NLRP10Q86W26 655 aa17.5■□□□□ 0.39
TSEN54-203ENST00000545228 C2CD5Q86YS7 1000 aa17.5■□□□□ 0.39
TSEN54-203ENST00000545228 BCAR3O75815 825 aa17.49■□□□□ 0.39
TSEN54-203ENST00000545228 LMNB1P20700 586 aa17.49■□□□□ 0.39
TSEN54-203ENST00000545228 CHMP4BQ9H444 224 aaKnown RBP17.49■□□□□ 0.39
TSEN54-203ENST00000545228 TRMT112Q9UI30 125 aaKnown RBP17.49■□□□□ 0.39
TSEN54-203ENST00000545228 TNRC6CQ9HCJ0 1690 aaKnown RBP17.48■□□□□ 0.39
TSEN54-203ENST00000545228 SH3TC1Q8TE82 1336 aa17.48■□□□□ 0.39
TSEN54-203ENST00000545228 SBF1O95248 1867 aa17.48■□□□□ 0.39
TSEN54-203ENST00000545228 CENPBP07199 599 aaPredicted RBP17.48■□□□□ 0.39
TSEN54-203ENST00000545228 PDE6BP35913 854 aa17.48■□□□□ 0.39
TSEN54-203ENST00000545228 DLEC1Q9Y238 1755 aa17.48■□□□□ 0.39
TSEN54-203ENST00000545228 UBN2Q6ZU65 1347 aa17.47■□□□□ 0.39
TSEN54-203ENST00000545228 WDR90Q96KV7 1748 aa17.47■□□□□ 0.39
TSEN54-203ENST00000545228 NEURL1BA8MQ27 555 aa17.47■□□□□ 0.39
TSEN54-203ENST00000545228 F6X3S4 739 aa17.47■□□□□ 0.39
TSEN54-203ENST00000545228 ATP5J2-PTCD1G3V325 749 aa17.47■□□□□ 0.39
TSEN54-203ENST00000545228 ZBTB38Q8NAP3 1195 aaPredicted RBP17.47■□□□□ 0.39
TSEN54-203ENST00000545228 PCCAP05165 728 aaPredicted RBP17.46■□□□□ 0.39
TSEN54-203ENST00000545228 BEND3Q5T5X7 828 aa17.46■□□□□ 0.39
TSEN54-203ENST00000545228 SMC1BQ8NDV3 1235 aa17.46■□□□□ 0.39
TSEN54-203ENST00000545228 C9orf78Q9NZ63 289 aaPredicted RBP17.46■□□□□ 0.39
TSEN54-203ENST00000545228 ABCC4O15439 1325 aa17.46■□□□□ 0.38
TSEN54-203ENST00000545228 GLTPD2A6NH11 291 aa17.45■□□□□ 0.38
TSEN54-203ENST00000545228 NTSR2O95665 410 aa17.45■□□□□ 0.38
TSEN54-203ENST00000545228 TRIM27P14373 513 aa17.45■□□□□ 0.38
TSEN54-203ENST00000545228 PRELPP51888 382 aa17.45■□□□□ 0.38
TSEN54-203ENST00000545228 HTRA3P83110 453 aa17.45■□□□□ 0.38
TSEN54-203ENST00000545228 SUSD4Q5VX71 490 aa17.45■□□□□ 0.38
TSEN54-203ENST00000545228 PRR5LQ6MZQ0 368 aa17.45■□□□□ 0.38
TSEN54-203ENST00000545228 DZIP1LQ8IYY4 767 aaKnown RBP17.45■□□□□ 0.38
TSEN54-203ENST00000545228 BRIP1Q9BX63 1249 aa17.45■□□□□ 0.38
TSEN54-203ENST00000545228 ANKRD31Q8N7Z5 1873 aa17.45■□□□□ 0.38
TSEN54-203ENST00000545228 CDHR2Q9BYE9 1310 aa17.45■□□□□ 0.38
TSEN54-203ENST00000545228 DDX60Q8IY21 1712 aaKnown RBP17.44■□□□□ 0.38
TSEN54-203ENST00000545228 FAM177BA6PVY3 158 aa17.44■□□□□ 0.38
TSEN54-203ENST00000545228 VEGFAP15692 232 aaPredicted RBP17.44■□□□□ 0.38
TSEN54-203ENST00000545228 GCKRQ14397 625 aa17.44■□□□□ 0.38
TSEN54-203ENST00000545228 ZNF622Q969S3 477 aaKnown RBP eCLIP17.44■□□□□ 0.38
TSEN54-203ENST00000545228 KLRG1Q96E93 195 aa17.44■□□□□ 0.38
TSEN54-203ENST00000545228 NFKBIEO00221 500 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms