RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 PNMA8AQ86V59 439 aaPredicted RBP9.87□□□□□ -0.83
ATXN3-216ENST00000545170 DDX12PQ92771 950 aa9.87□□□□□ -0.83
ATXN3-216ENST00000545170 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.87□□□□□ -0.83
ATXN3-216ENST00000545170 CCDC144AA2RUR9 1427 aa9.87□□□□□ -0.83
ATXN3-216ENST00000545170 STX6O43752 255 aa9.87□□□□□ -0.83
ATXN3-216ENST00000545170 CAVIN2O95810 425 aa9.87□□□□□ -0.83
ATXN3-216ENST00000545170 TSR2Q969E8 191 aaKnown RBP9.87□□□□□ -0.83
ATXN3-216ENST00000545170 SELENOOQ9BVL4 669 aa9.87□□□□□ -0.83
ATXN3-216ENST00000545170 LRRC23Q53EV4 343 aaPredicted RBP9.86□□□□□ -0.83
ATXN3-216ENST00000545170 SREK1Q8WXA9 508 aaKnown RBP9.86□□□□□ -0.83
ATXN3-216ENST00000545170 IFI16Q16666 785 aaKnown RBP9.86□□□□□ -0.83
ATXN3-216ENST00000545170 UBLCP1Q8WVY7 318 aaPredicted RBP9.86□□□□□ -0.83
ATXN3-216ENST00000545170 SH2B1Q9NRF2 756 aaPredicted RBP9.86□□□□□ -0.83
ATXN3-216ENST00000545170 NUTM2FA1L443 756 aa9.86□□□□□ -0.83
ATXN3-216ENST00000545170 RUFY3Q7L099 469 aa9.86□□□□□ -0.83
ATXN3-216ENST00000545170 TCP11L2Q8N4U5 519 aa9.86□□□□□ -0.83
ATXN3-216ENST00000545170 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.86□□□□□ -0.83
ATXN3-216ENST00000545170 TXNDC9O14530 226 aa9.86□□□□□ -0.83
ATXN3-216ENST00000545170 ZNF569Q5MCW4 686 aa9.86□□□□□ -0.83
ATXN3-216ENST00000545170 ARHGEF2Q92974 986 aaKnown RBP9.86□□□□□ -0.83
ATXN3-216ENST00000545170 COG7P83436 770 aa9.86□□□□□ -0.83
ATXN3-216ENST00000545170 LARP6Q9BRS8 491 aaKnown RBP9.86□□□□□ -0.83
ATXN3-216ENST00000545170 GRIPAP1Q4V328 841 aa9.85□□□□□ -0.83
ATXN3-216ENST00000545170 USP48Q86UV5 1035 aa9.85□□□□□ -0.83
ATXN3-216ENST00000545170 NEK11Q8NG66 645 aa9.85□□□□□ -0.83
ATXN3-216ENST00000545170 GSDMBQ8TAX9 411 aa9.85□□□□□ -0.83
ATXN3-216ENST00000545170 FAM200AQ8TCP9 573 aa9.85□□□□□ -0.83
ATXN3-216ENST00000545170 ATF7IPQ6VMQ6 1270 aa9.85□□□□□ -0.83
ATXN3-216ENST00000545170 VEZTQ9HBM0 779 aa9.85□□□□□ -0.83
ATXN3-216ENST00000545170 MLECQ14165 292 aa9.85□□□□□ -0.83
ATXN3-216ENST00000545170 MUM1Q2TAK8 710 aa9.85□□□□□ -0.83
ATXN3-216ENST00000545170 CCDC30Q5VVM6 783 aa9.85□□□□□ -0.83
ATXN3-216ENST00000545170 AOPEPQ8N6M6 819 aa9.85□□□□□ -0.83
ATXN3-216ENST00000545170 ABTB1Q969K4 478 aaPredicted RBP9.85□□□□□ -0.83
ATXN3-216ENST00000545170 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.85□□□□□ -0.83
ATXN3-216ENST00000545170 LRRC43Q8N309 656 aa9.85□□□□□ -0.83
ATXN3-216ENST00000545170 TBC1D32Q96NH3 1257 aa9.85□□□□□ -0.83
ATXN3-216ENST00000545170 CNPY2Q9Y2B0 182 aa9.85□□□□□ -0.83
ATXN3-216ENST00000545170 PRC1O43663 620 aa9.85□□□□□ -0.83
ATXN3-216ENST00000545170 TWISTNBQ3B726 338 aaPredicted RBP9.85□□□□□ -0.83
ATXN3-216ENST00000545170 GKAP1Q5VSY0 366 aaPredicted RBP9.85□□□□□ -0.83
ATXN3-216ENST00000545170 PRPF40BQ6NWY9 871 aaKnown RBP9.85□□□□□ -0.83
ATXN3-216ENST00000545170 CCDC63Q8NA47 563 aa9.85□□□□□ -0.83
ATXN3-216ENST00000545170 EFCC1Q9HA90 598 aa9.85□□□□□ -0.83
ATXN3-216ENST00000545170 SH3BGRP55822 239 aaPredicted RBP9.85□□□□□ -0.83
ATXN3-216ENST00000545170 PRR16Q569H4 304 aa9.85□□□□□ -0.83
ATXN3-216ENST00000545170 CYLC1P35663 651 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-216ENST00000545170 LZTFL1Q9NQ48 299 aa9.84□□□□□ -0.83
ATXN3-216ENST00000545170 RPSAP08865 295 aaKnown RBP9.84□□□□□ -0.83
ATXN3-216ENST00000545170 PHLDB2Q86SQ0 1253 aa9.84□□□□□ -0.83
ATXN3-216ENST00000545170 CCDC110Q8TBZ0 833 aa9.84□□□□□ -0.83
ATXN3-216ENST00000545170 DNAJC25Q9H1X3 360 aa9.84□□□□□ -0.83
ATXN3-216ENST00000545170 FAF1Q9UNN5 650 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-216ENST00000545170 KRT13P13646 458 aa9.84□□□□□ -0.83
ATXN3-216ENST00000545170 C8orf76Q96K31 380 aa9.84□□□□□ -0.83
ATXN3-216ENST00000545170 CCDC77Q9BR77 488 aa9.84□□□□□ -0.83
ATXN3-216ENST00000545170 STK38LQ9Y2H1 464 aa9.84□□□□□ -0.83
ATXN3-216ENST00000545170 TLDC2A0PJX2 215 aa9.84□□□□□ -0.83
ATXN3-216ENST00000545170 NUCKS1Q9H1E3 243 aaKnown RBP9.84□□□□□ -0.83
ATXN3-216ENST00000545170 LIMCH1Q9UPQ0 1083 aa9.84□□□□□ -0.83
ATXN3-216ENST00000545170 LUC7L3O95232 432 aaKnown RBP9.83□□□□□ -0.84
ATXN3-216ENST00000545170 SNCBQ16143 134 aa9.83□□□□□ -0.84
ATXN3-216ENST00000545170 SLC8A1P32418 973 aa9.83□□□□□ -0.84
ATXN3-216ENST00000545170 LIG3P49916 1009 aa9.83□□□□□ -0.84
ATXN3-216ENST00000545170 VAV2P52735 878 aa9.83□□□□□ -0.84
ATXN3-216ENST00000545170 HSP90AA4PQ58FG1 418 aa9.83□□□□□ -0.84
ATXN3-216ENST00000545170 AACSQ86V21 672 aa9.83□□□□□ -0.84
ATXN3-216ENST00000545170 BCL2L12Q9HB09 334 aa9.83□□□□□ -0.84
ATXN3-216ENST00000545170 OPHN1O60890 802 aa9.83□□□□□ -0.84
ATXN3-216ENST00000545170 ZNF131P52739 623 aa9.83□□□□□ -0.84
ATXN3-216ENST00000545170 DDX54Q8TDD1 881 aaKnown RBP9.83□□□□□ -0.84
ATXN3-216ENST00000545170 LRRD1A4D1F6 860 aa9.83□□□□□ -0.84
ATXN3-216ENST00000545170 PPP2R1AP30153 589 aa9.83□□□□□ -0.84
ATXN3-216ENST00000545170 STMN1P16949 149 aa9.83□□□□□ -0.84
ATXN3-216ENST00000545170 RAB11FIP4Q86YS3 637 aa9.83□□□□□ -0.84
ATXN3-216ENST00000545170 TUBBP07437 444 aa9.83□□□□□ -0.84
ATXN3-216ENST00000545170 HGSO14964 777 aaPredicted RBP9.82□□□□□ -0.84
ATXN3-216ENST00000545170 N4BP3O15049 544 aa9.82□□□□□ -0.84
ATXN3-216ENST00000545170 CCT4P50991 539 aaKnown RBP9.82□□□□□ -0.84
ATXN3-216ENST00000545170 C17orf53Q8N3J3 647 aaPredicted RBP9.82□□□□□ -0.84
ATXN3-216ENST00000545170 UBA5Q9GZZ9 404 aa9.82□□□□□ -0.84
ATXN3-216ENST00000545170 E7EVH7 732 aa9.82□□□□□ -0.84
ATXN3-216ENST00000545170 TMED1Q13445 227 aa9.82□□□□□ -0.84
ATXN3-216ENST00000545170 C20orf194Q5TEA3 1177 aa9.82□□□□□ -0.84
ATXN3-216ENST00000545170 VPS41P49754 854 aa9.82□□□□□ -0.84
ATXN3-216ENST00000545170 CCDC40Q4G0X9 1142 aa9.82□□□□□ -0.84
ATXN3-216ENST00000545170 COMMD10Q9Y6G5 202 aa9.82□□□□□ -0.84
ATXN3-216ENST00000545170 SMARCA5O60264 1052 aaPredicted RBP9.82□□□□□ -0.84
ATXN3-216ENST00000545170 TRIM21P19474 475 aaKnown RBP9.82□□□□□ -0.84
ATXN3-216ENST00000545170 BIRC2Q13490 618 aa9.82□□□□□ -0.84
ATXN3-216ENST00000545170 GOLGA5Q8TBA6 731 aa9.82□□□□□ -0.84
ATXN3-216ENST00000545170 TBC1D31Q96DN5 1066 aa9.82□□□□□ -0.84
ATXN3-216ENST00000545170 GUCA1BQ9UMX6 200 aa9.82□□□□□ -0.84
ATXN3-216ENST00000545170 EID1Q9Y6B2 187 aa9.82□□□□□ -0.84
ATXN3-216ENST00000545170 A6NNZ2 444 aa9.82□□□□□ -0.84
ATXN3-216ENST00000545170 ALDH3A1P30838 453 aa9.82□□□□□ -0.84
ATXN3-216ENST00000545170 PPARDQ03181 441 aa9.82□□□□□ -0.84
ATXN3-216ENST00000545170 TUBB8Q3ZCM7 444 aa9.82□□□□□ -0.84
ATXN3-216ENST00000545170 NUTM1Q86Y26 1132 aa9.82□□□□□ -0.84
ATXN3-216ENST00000545170 MCUR1Q96AQ8 359 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms