RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 LMBR1LQ6UX01 489 aa20.23■□□□□ 0.83
CHFR-224ENST00000545046 CCDC8Q9H0W5 538 aaPredicted RBP20.23■□□□□ 0.83
CHFR-224ENST00000545046 NWD2Q9ULI1 1742 aa20.23■□□□□ 0.83
CHFR-224ENST00000545046 DOT1LQ8TEK3 1739 aa20.23■□□□□ 0.83
CHFR-224ENST00000545046 FOXO4P98177 505 aa20.22■□□□□ 0.83
CHFR-224ENST00000545046 TCIRG1Q13488 830 aa20.22■□□□□ 0.83
CHFR-224ENST00000545046 CHMP3Q9Y3E7 222 aa20.22■□□□□ 0.83
CHFR-224ENST00000545046 PRIM1P49642 420 aaKnown RBP20.21■□□□□ 0.83
CHFR-224ENST00000545046 ISCA1Q9BUE6 129 aa20.21■□□□□ 0.83
CHFR-224ENST00000545046 EVI5LQ96CN4 794 aa20.21■□□□□ 0.83
CHFR-224ENST00000545046 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.21■□□□□ 0.83
CHFR-224ENST00000545046 ANAPC15P60006 121 aa20.2■□□□□ 0.82
CHFR-224ENST00000545046 RUFY2Q8WXA3 655 aa20.2■□□□□ 0.82
CHFR-224ENST00000545046 ARXQ96QS3 562 aa20.2■□□□□ 0.82
CHFR-224ENST00000545046 CCDC9Q9Y3X0 531 aaKnown RBP20.2■□□□□ 0.82
CHFR-224ENST00000545046 SPATA31A5Q5VU36 1347 aa20.2■□□□□ 0.82
CHFR-224ENST00000545046 SPATA31A7Q8IWB4 1347 aa20.2■□□□□ 0.82
CHFR-224ENST00000545046 SGSM2O43147 1006 aa20.19■□□□□ 0.82
CHFR-224ENST00000545046 CYP19A1P11511 503 aaPredicted RBP20.19■□□□□ 0.82
CHFR-224ENST00000545046 DIAPH3Q9NSV4 1193 aa20.19■□□□□ 0.82
CHFR-224ENST00000545046 CIZ1Q9ULV3 898 aaPredicted RBP20.19■□□□□ 0.82
CHFR-224ENST00000545046 DDIT3P35638 169 aa20.18■□□□□ 0.82
CHFR-224ENST00000545046 TFCP2Q12800 502 aa20.18■□□□□ 0.82
CHFR-224ENST00000545046 TRIM28Q13263 835 aaKnown RBP20.18■□□□□ 0.82
CHFR-224ENST00000545046 KIAA1211Q6ZU35 1233 aa20.18■□□□□ 0.82
CHFR-224ENST00000545046 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.18■□□□□ 0.82
CHFR-224ENST00000545046 MAP3K15Q6ZN16 1313 aa20.18■□□□□ 0.82
CHFR-224ENST00000545046 SLC4A9Q96Q91 983 aa20.18■□□□□ 0.82
CHFR-224ENST00000545046 TLR7Q9NYK1 1049 aaKnown RBP20.18■□□□□ 0.82
CHFR-224ENST00000545046 TNNI3KQ59H18 835 aa20.17■□□□□ 0.82
CHFR-224ENST00000545046 CWC27Q6UX04 472 aaKnown RBP20.17■□□□□ 0.82
CHFR-224ENST00000545046 FPGT-TNNI3KV9GXZ4 949 aa20.17■□□□□ 0.82
CHFR-224ENST00000545046 SLIT2O94813 1529 aa20.17■□□□□ 0.82
CHFR-224ENST00000545046 HIP1O00291 1037 aa20.17■□□□□ 0.82
CHFR-224ENST00000545046 DEKP35659 375 aaKnown RBP20.17■□□□□ 0.82
CHFR-224ENST00000545046 BARGINQ6ZT62 677 aa20.17■□□□□ 0.82
CHFR-224ENST00000545046 UBAP1LF5GYI3 381 aa20.16■□□□□ 0.82
CHFR-224ENST00000545046 GIGYF2Q6Y7W6 1299 aaKnown RBP20.16■□□□□ 0.82
CHFR-224ENST00000545046 IL25Q9H293 177 aa20.16■□□□□ 0.82
CHFR-224ENST00000545046 A0A0G2JS52 829 aa20.15■□□□□ 0.82
CHFR-224ENST00000545046 HSP90AB3PQ58FF7 597 aa20.15■□□□□ 0.82
CHFR-224ENST00000545046 FOXD4L1Q9NU39 408 aa20.15■□□□□ 0.82
CHFR-224ENST00000545046 NEK4P51957 841 aa20.15■□□□□ 0.82
CHFR-224ENST00000545046 BOLA2Q9H3K6 86 aa20.15■□□□□ 0.82
CHFR-224ENST00000545046 PCCAP05165 728 aaPredicted RBP20.14■□□□□ 0.81
CHFR-224ENST00000545046 MARCH10Q8NA82 808 aaPredicted RBP20.14■□□□□ 0.81
CHFR-224ENST00000545046 HSPA4P34932 840 aa20.14■□□□□ 0.81
CHFR-224ENST00000545046 IL17RAQ96F46 866 aa20.14■□□□□ 0.81
CHFR-224ENST00000545046 PALD1Q9ULE6 856 aa20.14■□□□□ 0.81
CHFR-224ENST00000545046 ZBTB1Q9Y2K1 713 aa20.14■□□□□ 0.81
CHFR-224ENST00000545046 ANKRD36CQ5JPF3 1778 aa20.14■□□□□ 0.81
CHFR-224ENST00000545046 RAD50Q92878 1312 aa20.13■□□□□ 0.81
CHFR-224ENST00000545046 IL15P40933 162 aaPredicted RBP20.13■□□□□ 0.81
CHFR-224ENST00000545046 MCM2P49736 904 aa20.13■□□□□ 0.81
CHFR-224ENST00000545046 IL27Q8NEV9 243 aa20.13■□□□□ 0.81
CHFR-224ENST00000545046 ACSBG1Q96GR2 724 aa20.13■□□□□ 0.81
CHFR-224ENST00000545046 LSG1Q9H089 658 aaKnown RBP20.13■□□□□ 0.81
CHFR-224ENST00000545046 NUP98P52948 1817 aa20.12■□□□□ 0.81
CHFR-224ENST00000545046 ATP5JP18859 108 aa20.12■□□□□ 0.81
CHFR-224ENST00000545046 IL6STP40189 918 aaPredicted RBP20.12■□□□□ 0.81
CHFR-224ENST00000545046 ZBTB38Q8NAP3 1195 aaPredicted RBP20.12■□□□□ 0.81
CHFR-224ENST00000545046 DBNLQ9UJU6 430 aaKnown RBP20.12■□□□□ 0.81
CHFR-224ENST00000545046 HLFQ16534 295 aa20.11■□□□□ 0.81
CHFR-224ENST00000545046 CCDC57Q2TAC2 916 aa20.11■□□□□ 0.81
CHFR-224ENST00000545046 ATG9AQ7Z3C6 839 aa20.11■□□□□ 0.81
CHFR-224ENST00000545046 FSD1Q9BTV5 496 aa20.11■□□□□ 0.81
CHFR-224ENST00000545046 GPR108Q9NPR9 543 aa20.11■□□□□ 0.81
CHFR-224ENST00000545046 EYA2O00167 538 aa20.11■□□□□ 0.81
CHFR-224ENST00000545046 FAM89AQ96GI7 184 aa20.11■□□□□ 0.81
CHFR-224ENST00000545046 PLA2G12BQ9BX93 195 aa20.11■□□□□ 0.81
CHFR-224ENST00000545046 CIAO1O76071 339 aa20.1■□□□□ 0.81
CHFR-224ENST00000545046 ERVV-1B6SEH8 477 aa20.1■□□□□ 0.81
CHFR-224ENST00000545046 MCM4P33991 863 aa20.1■□□□□ 0.81
CHFR-224ENST00000545046 DZIP3Q86Y13 1208 aaKnown RBP20.1■□□□□ 0.81
CHFR-224ENST00000545046 NGLY1Q96IV0 654 aa20.1■□□□□ 0.81
CHFR-224ENST00000545046 ATP6V1AP38606 617 aa20.09■□□□□ 0.81
CHFR-224ENST00000545046 RAB3GAP1Q15042 981 aa20.09■□□□□ 0.81
CHFR-224ENST00000545046 NLRP10Q86W26 655 aa20.09■□□□□ 0.81
CHFR-224ENST00000545046 ZNF594Q96JF6 807 aaPredicted RBP20.09■□□□□ 0.81
CHFR-224ENST00000545046 DBNDD2Q9BQY9 259 aa20.09■□□□□ 0.81
CHFR-224ENST00000545046 CDHR2Q9BYE9 1310 aa20.09■□□□□ 0.81
CHFR-224ENST00000545046 JCADQ9P266 1359 aa20.09■□□□□ 0.81
CHFR-224ENST00000545046 GPTP24298 496 aa20.08■□□□□ 0.81
CHFR-224ENST00000545046 NEUROD6Q96NK8 337 aa20.08■□□□□ 0.81
CHFR-224ENST00000545046 CWC22Q9HCG8 908 aaKnown RBP20.08■□□□□ 0.81
CHFR-224ENST00000545046 NMIQ13287 307 aaPredicted RBP20.08■□□□□ 0.8
CHFR-224ENST00000545046 C8orf37Q96NL8 207 aa20.08■□□□□ 0.8
CHFR-224ENST00000545046 CCDC87Q9NVE4 849 aa20.08■□□□□ 0.8
CHFR-224ENST00000545046 FBXO3Q9UK99 471 aa20.08■□□□□ 0.8
CHFR-224ENST00000545046 LRRC24Q50LG9 513 aa20.07■□□□□ 0.8
CHFR-224ENST00000545046 TBC1D2BQ9UPU7 963 aa20.07■□□□□ 0.8
CHFR-224ENST00000545046 MYH3P11055 1940 aa20.07■□□□□ 0.8
CHFR-224ENST00000545046 CSF1RP07333 972 aa20.07■□□□□ 0.8
CHFR-224ENST00000545046 GSE1Q14687 1217 aa20.07■□□□□ 0.8
CHFR-224ENST00000545046 TAF7LQ5H9L4 462 aa20.07■□□□□ 0.8
CHFR-224ENST00000545046 SMARCC1Q92922 1105 aaPredicted RBP20.07■□□□□ 0.8
CHFR-224ENST00000545046 TNPO1Q92973 898 aaKnown RBP20.07■□□□□ 0.8
CHFR-224ENST00000545046 SNX14Q9Y5W7 946 aa20.07■□□□□ 0.8
CHFR-224ENST00000545046 LOC102724428A0A0B4J2F2 783 aa20.06■□□□□ 0.8
CHFR-224ENST00000545046 SIK1P57059 783 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms