RNA–Protein interactions for RNA: ENST00000545021.2

LYSMD4-210, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-210ENST00000545021 PTPN14Q15678 1187 aa22.78■■□□□ 1.24
LYSMD4-210ENST00000545021 CABP2Q9NPB3 220 aa22.78■■□□□ 1.24
LYSMD4-210ENST00000545021 TRPC5Q9UL62 973 aaPredicted RBP22.78■■□□□ 1.24
LYSMD4-210ENST00000545021 NGLY1Q96IV0 654 aa22.78■■□□□ 1.24
LYSMD4-210ENST00000545021 PIK3C2AO00443 1686 aa22.78■■□□□ 1.24
LYSMD4-210ENST00000545021 ABCC6O95255 1503 aa22.77■■□□□ 1.24
LYSMD4-210ENST00000545021 LUZP1Q86V48 1076 aa22.77■■□□□ 1.24
LYSMD4-210ENST00000545021 NEMFO60524 1076 aa22.77■■□□□ 1.24
LYSMD4-210ENST00000545021 RXRBP28702 533 aa22.77■■□□□ 1.24
LYSMD4-210ENST00000545021 CDC25BP30305 580 aa22.77■■□□□ 1.24
LYSMD4-210ENST00000545021 TYRO3Q06418 890 aa22.77■■□□□ 1.24
LYSMD4-210ENST00000545021 TPRNQ4KMQ1 711 aa22.77■■□□□ 1.24
LYSMD4-210ENST00000545021 MAP3K11Q16584 847 aa22.76■■□□□ 1.23
LYSMD4-210ENST00000545021 CEP85Q6P2H3 762 aa22.76■■□□□ 1.23
LYSMD4-210ENST00000545021 TSPYL6Q8N831 410 aa22.76■■□□□ 1.23
LYSMD4-210ENST00000545021 TRIM5Q9C035 493 aa22.76■■□□□ 1.23
LYSMD4-210ENST00000545021 CPDO75976 1380 aa22.76■■□□□ 1.23
LYSMD4-210ENST00000545021 ADAMTS2O95450 1211 aa22.76■■□□□ 1.23
LYSMD4-210ENST00000545021 GTF3C6Q969F1 213 aa22.76■■□□□ 1.23
LYSMD4-210ENST00000545021 SYT1P21579 422 aa22.75■■□□□ 1.23
LYSMD4-210ENST00000545021 TDRD7Q8NHU6 1098 aaKnown RBP22.75■■□□□ 1.23
LYSMD4-210ENST00000545021 CBX8Q9HC52 389 aa22.75■■□□□ 1.23
LYSMD4-210ENST00000545021 USP21Q9UK80 565 aa22.75■■□□□ 1.23
LYSMD4-210ENST00000545021 LMO7Q8WWI1 1683 aa22.75■■□□□ 1.23
LYSMD4-210ENST00000545021 TTC21AQ8NDW8 1320 aa22.75■■□□□ 1.23
LYSMD4-210ENST00000545021 RAD50Q92878 1312 aa22.75■■□□□ 1.23
LYSMD4-210ENST00000545021 DHX16O60231 1041 aaKnown RBP22.74■■□□□ 1.23
LYSMD4-210ENST00000545021 NFATC2IPQ8NCF5 419 aa22.74■■□□□ 1.23
LYSMD4-210ENST00000545021 PNMA6AP0CW24 399 aaPredicted RBP22.74■■□□□ 1.23
LYSMD4-210ENST00000545021 PLA2G4AP47712 749 aa22.74■■□□□ 1.23
LYSMD4-210ENST00000545021 PDE1AP54750 535 aa22.74■■□□□ 1.23
LYSMD4-210ENST00000545021 TPM4P67936 248 aa22.74■■□□□ 1.23
LYSMD4-210ENST00000545021 UPF3BQ9BZI7 483 aaKnown RBP22.74■■□□□ 1.23
LYSMD4-210ENST00000545021 CLIP2Q9UDT6 1046 aa22.74■■□□□ 1.23
LYSMD4-210ENST00000545021 CD163L1Q9NR16 1453 aa22.74■■□□□ 1.23
LYSMD4-210ENST00000545021 KIF2AO00139 706 aaPredicted RBP22.73■■□□□ 1.23
LYSMD4-210ENST00000545021 GLI3P10071 1580 aa22.73■■□□□ 1.23
LYSMD4-210ENST00000545021 EPB41L2O43491 1005 aaKnown RBP22.73■■□□□ 1.23
LYSMD4-210ENST00000545021 SYT10Q6XYQ8 523 aa22.73■■□□□ 1.23
LYSMD4-210ENST00000545021 TUBGCP6Q96RT7 1819 aa22.73■■□□□ 1.23
LYSMD4-210ENST00000545021 KCND1Q9NSA2 647 aa22.72■■□□□ 1.23
LYSMD4-210ENST00000545021 POLKQ9UBT6 870 aa22.72■■□□□ 1.23
LYSMD4-210ENST00000545021 CASQ1P31415 396 aa22.72■■□□□ 1.23
LYSMD4-210ENST00000545021 UNC5CLQ8IV45 518 aa22.72■■□□□ 1.23
LYSMD4-210ENST00000545021 LRRC8AQ8IWT6 810 aa22.72■■□□□ 1.23
LYSMD4-210ENST00000545021 NUP62CLQ9H1M0 184 aa22.72■■□□□ 1.23
LYSMD4-210ENST00000545021 QTRT2Q9H974 415 aaKnown RBP22.72■■□□□ 1.23
LYSMD4-210ENST00000545021 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.71■■□□□ 1.23
LYSMD4-210ENST00000545021 USP27XA6NNY8 438 aa22.71■■□□□ 1.23
LYSMD4-210ENST00000545021 SOX12O15370 315 aa22.71■■□□□ 1.23
LYSMD4-210ENST00000545021 GNAI1P63096 354 aa22.71■■□□□ 1.23
LYSMD4-210ENST00000545021 NEK11Q8NG66 645 aa22.71■■□□□ 1.23
LYSMD4-210ENST00000545021 ZBTB9Q96C00 473 aa22.71■■□□□ 1.23
LYSMD4-210ENST00000545021 ANO2Q9NQ90 1003 aa22.71■■□□□ 1.23
LYSMD4-210ENST00000545021 CABP1Q9NZU7 370 aa22.71■■□□□ 1.23
LYSMD4-210ENST00000545021 MYO1CO00159 1063 aa22.71■■□□□ 1.23
LYSMD4-210ENST00000545021 CLCN6P51797 869 aa22.71■■□□□ 1.23
LYSMD4-210ENST00000545021 CCDC144BQ3MJ40 725 aa22.71■■□□□ 1.23
LYSMD4-210ENST00000545021 CCDC144CPQ8IYA2 1237 aa22.71■■□□□ 1.23
LYSMD4-210ENST00000545021 AATKQ6ZMQ8 1374 aa22.7■■□□□ 1.23
LYSMD4-210ENST00000545021 USP31Q70CQ4 1352 aa22.7■■□□□ 1.23
LYSMD4-210ENST00000545021 FCHSD2O94868 740 aa22.7■■□□□ 1.22
LYSMD4-210ENST00000545021 GTF2A1P52655 376 aaPredicted RBP22.7■■□□□ 1.22
LYSMD4-210ENST00000545021 KRBA2Q6ZNG9 492 aa22.7■■□□□ 1.22
LYSMD4-210ENST00000545021 L2HGDHQ9H9P8 463 aa22.7■■□□□ 1.22
LYSMD4-210ENST00000545021 TWISTNBQ3B726 338 aaPredicted RBP22.7■■□□□ 1.22
LYSMD4-210ENST00000545021 ANO6Q4KMQ2 910 aa22.7■■□□□ 1.22
LYSMD4-210ENST00000545021 ICE2Q659A1 982 aa22.7■■□□□ 1.22
LYSMD4-210ENST00000545021 ELP1O95163 1332 aa22.7■■□□□ 1.22
LYSMD4-210ENST00000545021 DIAPH1O60610 1272 aaKnown RBP22.69■■□□□ 1.22
LYSMD4-210ENST00000545021 DNM1Q05193 864 aaKnown RBP22.69■■□□□ 1.22
LYSMD4-210ENST00000545021 VPS72Q15906 364 aa22.69■■□□□ 1.22
LYSMD4-210ENST00000545021 APBB1O00213 710 aa22.69■■□□□ 1.22
LYSMD4-210ENST00000545021 ZRANB2O95218 330 aaKnown RBP eCLIP22.69■■□□□ 1.22
LYSMD4-210ENST00000545021 CWC15Q9P013 229 aaKnown RBP22.68■■□□□ 1.22
LYSMD4-210ENST00000545021 EDC4Q6P2E9 1401 aaKnown RBP22.68■■□□□ 1.22
LYSMD4-210ENST00000545021 ZNF853P0CG23 659 aa22.68■■□□□ 1.22
LYSMD4-210ENST00000545021 CHMLP26374 656 aa22.68■■□□□ 1.22
LYSMD4-210ENST00000545021 GPS2Q13227 327 aa22.68■■□□□ 1.22
LYSMD4-210ENST00000545021 BRMS1Q9HCU9 246 aa22.68■■□□□ 1.22
LYSMD4-210ENST00000545021 PSEN1P49768 467 aa22.67■■□□□ 1.22
LYSMD4-210ENST00000545021 ATG3Q9NT62 314 aa22.67■■□□□ 1.22
LYSMD4-210ENST00000545021 RNF216Q9NWF9 866 aaPredicted RBP22.67■■□□□ 1.22
LYSMD4-210ENST00000545021 SMC3Q9UQE7 1217 aa22.67■■□□□ 1.22
LYSMD4-210ENST00000545021 ANKRD26Q9UPS8 1709 aa22.67■■□□□ 1.22
LYSMD4-210ENST00000545021 HAP1P54257 671 aaPredicted RBP22.67■■□□□ 1.22
LYSMD4-210ENST00000545021 RBM43Q6ZSC3 357 aaKnown RBP22.67■■□□□ 1.22
LYSMD4-210ENST00000545021 LRRFIP2Q9Y608 721 aaKnown RBP22.67■■□□□ 1.22
LYSMD4-210ENST00000545021 ERCC6LQ2NKX8 1250 aa22.66■■□□□ 1.22
LYSMD4-210ENST00000545021 CCAR2Q8N163 923 aaKnown RBP22.66■■□□□ 1.22
LYSMD4-210ENST00000545021 UBXN6Q9BZV1 441 aa22.66■■□□□ 1.22
LYSMD4-210ENST00000545021 MBIPQ9NS73 344 aa22.66■■□□□ 1.22
LYSMD4-210ENST00000545021 COL18A1P39060 1754 aa22.66■■□□□ 1.22
LYSMD4-210ENST00000545021 HSPA4P34932 840 aa22.66■■□□□ 1.22
LYSMD4-210ENST00000545021 ZSCAN26Q16670 478 aa22.66■■□□□ 1.22
LYSMD4-210ENST00000545021 C10orf67Q8IYJ2 551 aa22.66■■□□□ 1.22
LYSMD4-210ENST00000545021 TTC21BQ7Z4L5 1316 aa22.65■■□□□ 1.22
LYSMD4-210ENST00000545021 ELL2O00472 640 aaPredicted RBP22.65■■□□□ 1.22
LYSMD4-210ENST00000545021 ATP8B1O43520 1251 aa22.65■■□□□ 1.22
LYSMD4-210ENST00000545021 SKILP12757 684 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms