RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 BARGINQ6ZT62 677 aa16.8■□□□□ 0.28
HCFC2-202ENST00000544223 ERBB4Q15303 1308 aa16.8■□□□□ 0.28
HCFC2-202ENST00000544223 NWD2Q9ULI1 1742 aa16.8■□□□□ 0.28
HCFC2-202ENST00000544223 LOC102724428A0A0B4J2F2 783 aa16.79■□□□□ 0.28
HCFC2-202ENST00000544223 RFX5P48382 616 aaPredicted RBP16.79■□□□□ 0.28
HCFC2-202ENST00000544223 SIK1P57059 783 aa16.79■□□□□ 0.28
HCFC2-202ENST00000544223 VPS72Q15906 364 aa16.79■□□□□ 0.28
HCFC2-202ENST00000544223 VSIG10Q8N0Z9 540 aa16.79■□□□□ 0.28
HCFC2-202ENST00000544223 H7C1W4 665 aa16.79■□□□□ 0.28
HCFC2-202ENST00000544223 KIF6Q6ZMV9 814 aa16.79■□□□□ 0.28
HCFC2-202ENST00000544223 TJP1Q07157 1748 aa16.79■□□□□ 0.28
HCFC2-202ENST00000544223 CRKLP46109 303 aaKnown RBP16.78■□□□□ 0.28
HCFC2-202ENST00000544223 TFCP2Q12800 502 aa16.78■□□□□ 0.28
HCFC2-202ENST00000544223 TCIRG1Q13488 830 aa16.78■□□□□ 0.28
HCFC2-202ENST00000544223 CLASRPQ8N2M8 674 aaKnown RBP16.78■□□□□ 0.28
HCFC2-202ENST00000544223 FNBP4Q8N3X1 1017 aaPredicted RBP16.78■□□□□ 0.28
HCFC2-202ENST00000544223 CDCA7Q9BWT1 371 aaPredicted RBP16.78■□□□□ 0.28
HCFC2-202ENST00000544223 INTS5Q6P9B9 1019 aaKnown RBP16.78■□□□□ 0.28
HCFC2-202ENST00000544223 STAP2Q9UGK3 403 aa16.78■□□□□ 0.28
HCFC2-202ENST00000544223 MYH14Q7Z406 1995 aaKnown RBP16.78■□□□□ 0.28
HCFC2-202ENST00000544223 IFIT2P09913 472 aaKnown RBP16.77■□□□□ 0.28
HCFC2-202ENST00000544223 EDC3Q96F86 508 aaKnown RBP16.77■□□□□ 0.28
HCFC2-202ENST00000544223 PUS3Q9BZE2 481 aaKnown RBP16.77■□□□□ 0.28
HCFC2-202ENST00000544223 TUBGCP6Q96RT7 1819 aa16.77■□□□□ 0.28
HCFC2-202ENST00000544223 PALLDQ8WX93 1383 aa16.77■□□□□ 0.28
HCFC2-202ENST00000544223 LRRC24Q50LG9 513 aa16.77■□□□□ 0.28
HCFC2-202ENST00000544223 DZIP3Q86Y13 1208 aaKnown RBP16.77■□□□□ 0.28
HCFC2-202ENST00000544223 AFF2P51816 1311 aa16.77■□□□□ 0.27
HCFC2-202ENST00000544223 TEX13AQ9BXU3 409 aaPredicted RBP16.76■□□□□ 0.27
HCFC2-202ENST00000544223 MAP3K15Q6ZN16 1313 aa16.76■□□□□ 0.27
HCFC2-202ENST00000544223 CHGBP05060 677 aa16.76■□□□□ 0.27
HCFC2-202ENST00000544223 ISCA1Q9BUE6 129 aa16.76■□□□□ 0.27
HCFC2-202ENST00000544223 FOXD4L1Q9NU39 408 aa16.76■□□□□ 0.27
HCFC2-202ENST00000544223 CHMLP26374 656 aa16.75■□□□□ 0.27
HCFC2-202ENST00000544223 RBM25P49756 843 aaKnown RBP16.75■□□□□ 0.27
HCFC2-202ENST00000544223 CCDC191Q8NCU4 936 aa16.75■□□□□ 0.27
HCFC2-202ENST00000544223 USP26Q9BXU7 913 aa16.75■□□□□ 0.27
HCFC2-202ENST00000544223 RABL6Q3YEC7 729 aaPredicted RBP16.75■□□□□ 0.27
HCFC2-202ENST00000544223 HSP90AB4PQ58FF6 505 aa16.75■□□□□ 0.27
HCFC2-202ENST00000544223 BOLA2Q9H3K6 86 aa16.75■□□□□ 0.27
HCFC2-202ENST00000544223 GIGYF2Q6Y7W6 1299 aaKnown RBP16.74■□□□□ 0.27
HCFC2-202ENST00000544223 UBN2Q6ZU65 1347 aa16.74■□□□□ 0.27
HCFC2-202ENST00000544223 NLRP10Q86W26 655 aa16.73■□□□□ 0.27
HCFC2-202ENST00000544223 TIMM10P62072 90 aa16.73■□□□□ 0.27
HCFC2-202ENST00000544223 CWC27Q6UX04 472 aaKnown RBP16.73■□□□□ 0.27
HCFC2-202ENST00000544223 LINC00116Q8NCU8 138 aa16.73■□□□□ 0.27
HCFC2-202ENST00000544223 CCDC87Q9NVE4 849 aa16.73■□□□□ 0.27
HCFC2-202ENST00000544223 HDAC5Q9UQL6 1122 aa16.73■□□□□ 0.27
HCFC2-202ENST00000544223 AK9Q5TCS8 1911 aa16.73■□□□□ 0.27
HCFC2-202ENST00000544223 ESYT1Q9BSJ8 1104 aa16.72■□□□□ 0.27
HCFC2-202ENST00000544223 ANO2Q9NQ90 1003 aa16.72■□□□□ 0.27
HCFC2-202ENST00000544223 COPRSQ9NQ92 184 aa16.72■□□□□ 0.27
HCFC2-202ENST00000544223 DBNLQ9UJU6 430 aaKnown RBP16.72■□□□□ 0.27
HCFC2-202ENST00000544223 UTRNP46939 3433 aa16.72■□□□□ 0.27
HCFC2-202ENST00000544223 CASC1Q6TDU7 716 aa16.72■□□□□ 0.27
HCFC2-202ENST00000544223 ATG9AQ7Z3C6 839 aa16.72■□□□□ 0.27
HCFC2-202ENST00000544223 AMIGO3Q86WK7 504 aa16.72■□□□□ 0.27
HCFC2-202ENST00000544223 GJD4Q96KN9 370 aaPredicted RBP16.72■□□□□ 0.27
HCFC2-202ENST00000544223 DBNDD2Q9BQY9 259 aa16.72■□□□□ 0.27
HCFC2-202ENST00000544223 ECHDC1Q9NTX5 307 aa16.72■□□□□ 0.27
HCFC2-202ENST00000544223 TRMT112Q9UI30 125 aaKnown RBP16.72■□□□□ 0.27
HCFC2-202ENST00000544223 NUP98P52948 1817 aa16.72■□□□□ 0.27
HCFC2-202ENST00000544223 SPATA31A6Q5VVP1 1343 aa16.71■□□□□ 0.27
HCFC2-202ENST00000544223 ERC2O15083 957 aa16.71■□□□□ 0.27
HCFC2-202ENST00000544223 NEUROD6Q96NK8 337 aa16.71■□□□□ 0.27
HCFC2-202ENST00000544223 PALD1Q9ULE6 856 aa16.71■□□□□ 0.27
HCFC2-202ENST00000544223 HCLS1P14317 486 aaPredicted RBP16.71■□□□□ 0.27
HCFC2-202ENST00000544223 EIF5P55010 431 aaKnown RBP16.71■□□□□ 0.27
HCFC2-202ENST00000544223 ERC1Q8IUD2 1116 aa16.71■□□□□ 0.27
HCFC2-202ENST00000544223 IL6STP40189 918 aaPredicted RBP16.7■□□□□ 0.26
HCFC2-202ENST00000544223 BECN1Q14457 450 aa16.7■□□□□ 0.26
HCFC2-202ENST00000544223 SLFNL1Q499Z3 407 aa16.7■□□□□ 0.26
HCFC2-202ENST00000544223 TNNI3KQ59H18 835 aa16.7■□□□□ 0.26
HCFC2-202ENST00000544223 GREM2Q9H772 168 aa16.7■□□□□ 0.26
HCFC2-202ENST00000544223 FPGT-TNNI3KV9GXZ4 949 aa16.7■□□□□ 0.26
HCFC2-202ENST00000544223 BICDL1Q6ZP65 573 aa16.69■□□□□ 0.26
HCFC2-202ENST00000544223 SUSD4Q5VX71 490 aa16.69■□□□□ 0.26
HCFC2-202ENST00000544223 ZBTB38Q8NAP3 1195 aaPredicted RBP16.69■□□□□ 0.26
HCFC2-202ENST00000544223 SEPT12Q8IYM1 358 aa16.68■□□□□ 0.26
HCFC2-202ENST00000544223 CCDC24Q8N4L8 307 aa16.68■□□□□ 0.26
HCFC2-202ENST00000544223 GLRX3O76003 335 aaKnown RBP16.68■□□□□ 0.26
HCFC2-202ENST00000544223 FAM227BQ96M60 508 aa16.68■□□□□ 0.26
HCFC2-202ENST00000544223 DNAJC2Q99543 621 aaKnown RBP16.68■□□□□ 0.26
HCFC2-202ENST00000544223 IRS4O14654 1257 aaPredicted RBP16.67■□□□□ 0.26
HCFC2-202ENST00000544223 PCCAP05165 728 aaPredicted RBP16.67■□□□□ 0.26
HCFC2-202ENST00000544223 QTRT2Q9H974 415 aaKnown RBP16.67■□□□□ 0.26
HCFC2-202ENST00000544223 CCDC57Q2TAC2 916 aa16.67■□□□□ 0.26
HCFC2-202ENST00000544223 NOL8Q76FK4 1167 aaKnown RBP16.67■□□□□ 0.26
HCFC2-202ENST00000544223 CNTROBQ8N137 903 aa16.67■□□□□ 0.26
HCFC2-202ENST00000544223 SNAP23O00161 211 aa16.66■□□□□ 0.26
HCFC2-202ENST00000544223 CAMTA2O94983 1202 aa16.66■□□□□ 0.26
HCFC2-202ENST00000544223 TTC41PQ6P2S7 1318 aa16.66■□□□□ 0.26
HCFC2-202ENST00000544223 SRP68Q9UHB9 627 aaKnown RBP16.66■□□□□ 0.26
HCFC2-202ENST00000544223 AOX1Q06278 1338 aa16.66■□□□□ 0.26
HCFC2-202ENST00000544223 REC8O95072 547 aa16.65■□□□□ 0.26
HCFC2-202ENST00000544223 ITGA6P23229 1130 aa16.65■□□□□ 0.26
HCFC2-202ENST00000544223 TRIM28Q13263 835 aaKnown RBP16.65■□□□□ 0.26
HCFC2-202ENST00000544223 HSCBQ8IWL3 235 aa16.65■□□□□ 0.26
HCFC2-202ENST00000544223 HELBQ8NG08 1087 aaPredicted RBP16.65■□□□□ 0.26
HCFC2-202ENST00000544223 TTLL11Q8NHH1 800 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms