RNA–Protein interactions for RNA: ENST00000544105.5

LDHC-208, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-208ENST00000544105 GCKRQ14397 625 aa12.81□□□□□ -0.36
LDHC-208ENST00000544105 LRP10Q7Z4F1 713 aa12.81□□□□□ -0.36
LDHC-208ENST00000544105 ZNF330Q9Y3S2 320 aaPredicted RBP12.81□□□□□ -0.36
LDHC-208ENST00000544105 N4BP2Q86UW6 1770 aaPredicted RBP12.81□□□□□ -0.36
LDHC-208ENST00000544105 ITGB4P16144 1822 aa12.81□□□□□ -0.36
LDHC-208ENST00000544105 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.8□□□□□ -0.36
LDHC-208ENST00000544105 SRGAP3O43295 1099 aa12.8□□□□□ -0.36
LDHC-208ENST00000544105 EIF5BO60841 1220 aaKnown RBP12.8□□□□□ -0.36
LDHC-208ENST00000544105 PYGBP11216 843 aa12.8□□□□□ -0.36
LDHC-208ENST00000544105 CYP19A1P11511 503 aaPredicted RBP12.8□□□□□ -0.36
LDHC-208ENST00000544105 ATP6V1AP38606 617 aa12.8□□□□□ -0.36
LDHC-208ENST00000544105 HSP90AB3PQ58FF7 597 aa12.8□□□□□ -0.36
LDHC-208ENST00000544105 PPP1R42Q7Z4L9 355 aa12.8□□□□□ -0.36
LDHC-208ENST00000544105 SSH3Q8TE77 659 aa12.8□□□□□ -0.36
LDHC-208ENST00000544105 LRRCC1Q9C099 1032 aa12.8□□□□□ -0.36
LDHC-208ENST00000544105 QTRT2Q9H974 415 aaKnown RBP12.8□□□□□ -0.36
LDHC-208ENST00000544105 UTYO14607 1347 aa12.8□□□□□ -0.36
LDHC-208ENST00000544105 APBB1O00213 710 aa12.79□□□□□ -0.36
LDHC-208ENST00000544105 SURF6O75683 361 aaKnown RBP12.79□□□□□ -0.36
LDHC-208ENST00000544105 IGKV5-2P06315 115 aa12.79□□□□□ -0.36
LDHC-208ENST00000544105 ANP32AP39687 249 aaKnown RBP12.79□□□□□ -0.36
LDHC-208ENST00000544105 UPF2Q9HAU5 1272 aaKnown RBP12.79□□□□□ -0.36
LDHC-208ENST00000544105 CWC25Q9NXE8 425 aaPredicted RBP12.79□□□□□ -0.36
LDHC-208ENST00000544105 KAT6BQ8WYB5 2073 aa12.78□□□□□ -0.36
LDHC-208ENST00000544105 A0A087WZG4 1122 aa12.78□□□□□ -0.36
LDHC-208ENST00000544105 LOC102724428A0A0B4J2F2 783 aa12.78□□□□□ -0.36
LDHC-208ENST00000544105 PNMA6EA0A0J9YXQ4 647 aa12.78□□□□□ -0.36
LDHC-208ENST00000544105 SIK1P57059 783 aa12.78□□□□□ -0.36
LDHC-208ENST00000544105 OS9Q13438 667 aaPredicted RBP12.78□□□□□ -0.36
LDHC-208ENST00000544105 MTX1Q13505 466 aa12.78□□□□□ -0.36
LDHC-208ENST00000544105 TTLL7Q6ZT98 887 aa12.78□□□□□ -0.36
LDHC-208ENST00000544105 ERC1Q8IUD2 1116 aa12.78□□□□□ -0.36
LDHC-208ENST00000544105 CCDC191Q8NCU4 936 aa12.78□□□□□ -0.36
LDHC-208ENST00000544105 BCL11AQ9H165 835 aa12.78□□□□□ -0.36
LDHC-208ENST00000544105 ZBTB3Q9H5J0 574 aa12.78□□□□□ -0.36
LDHC-208ENST00000544105 DOT1LQ8TEK3 1739 aa12.78□□□□□ -0.36
LDHC-208ENST00000544105 ATP5J2-PTCD1G3V325 749 aa12.77□□□□□ -0.37
LDHC-208ENST00000544105 ONECUT3O60422 494 aaPredicted RBP12.77□□□□□ -0.37
LDHC-208ENST00000544105 IL6STP40189 918 aaPredicted RBP12.77□□□□□ -0.37
LDHC-208ENST00000544105 CCDC87Q9NVE4 849 aa12.77□□□□□ -0.37
LDHC-208ENST00000544105 EXOC6BQ9Y2D4 811 aa12.77□□□□□ -0.37
LDHC-208ENST00000544105 PALLDQ8WX93 1383 aa12.77□□□□□ -0.37
LDHC-208ENST00000544105 HMGB2P26583 209 aaKnown RBP12.76□□□□□ -0.37
LDHC-208ENST00000544105 TCIRG1Q13488 830 aa12.76□□□□□ -0.37
LDHC-208ENST00000544105 ZNF772Q68DY9 489 aaPredicted RBP12.76□□□□□ -0.37
LDHC-208ENST00000544105 SEPT12Q8IYM1 358 aa12.76□□□□□ -0.37
LDHC-208ENST00000544105 KIF1BPQ96EK5 621 aa12.76□□□□□ -0.37
LDHC-208ENST00000544105 SUCLG2Q96I99 432 aa12.76□□□□□ -0.37
LDHC-208ENST00000544105 MAP3K15Q6ZN16 1313 aa12.76□□□□□ -0.37
LDHC-208ENST00000544105 ATRNO75882 1429 aa12.76□□□□□ -0.37
LDHC-208ENST00000544105 ERVV-1B6SEH8 477 aa12.75□□□□□ -0.37
LDHC-208ENST00000544105 H7C1W4 665 aa12.75□□□□□ -0.37
LDHC-208ENST00000544105 KCNQ2O43526 872 aa12.75□□□□□ -0.37
LDHC-208ENST00000544105 GLI3P10071 1580 aa12.75□□□□□ -0.37
LDHC-208ENST00000544105 TRIM28Q13263 835 aaKnown RBP12.75□□□□□ -0.37
LDHC-208ENST00000544105 G3BP1Q13283 466 aaKnown RBP eCLIP12.75□□□□□ -0.37
LDHC-208ENST00000544105 C8orf34Q49A92 452 aa12.75□□□□□ -0.37
LDHC-208ENST00000544105 BMP2KLQ5H9B9 411 aa12.75□□□□□ -0.37
LDHC-208ENST00000544105 UBE3BQ7Z3V4 1068 aa12.75□□□□□ -0.37
LDHC-208ENST00000544105 SLAIN1Q8ND83 568 aa12.75□□□□□ -0.37
LDHC-208ENST00000544105 SMARCA5O60264 1052 aaPredicted RBP12.74□□□□□ -0.37
LDHC-208ENST00000544105 CASC1Q6TDU7 716 aa12.74□□□□□ -0.37
LDHC-208ENST00000544105 GIGYF2Q6Y7W6 1299 aaKnown RBP12.74□□□□□ -0.37
LDHC-208ENST00000544105 DZIP3Q86Y13 1208 aaKnown RBP12.74□□□□□ -0.37
LDHC-208ENST00000544105 PLEKHM2Q8IWE5 1019 aa12.74□□□□□ -0.37
LDHC-208ENST00000544105 SLC4A9Q96Q91 983 aa12.74□□□□□ -0.37
LDHC-208ENST00000544105 BICC1Q9H694 974 aaKnown RBP12.74□□□□□ -0.37
LDHC-208ENST00000544105 NOP58Q9Y2X3 529 aaKnown RBP12.74□□□□□ -0.37
LDHC-208ENST00000544105 COL15A1P39059 1388 aa12.73□□□□□ -0.37
LDHC-208ENST00000544105 CRKLP46109 303 aaKnown RBP12.73□□□□□ -0.37
LDHC-208ENST00000544105 CLASRPQ8N2M8 674 aaKnown RBP12.73□□□□□ -0.37
LDHC-208ENST00000544105 ISCA1Q9BUE6 129 aa12.73□□□□□ -0.37
LDHC-208ENST00000544105 ZBTB1Q9Y2K1 713 aa12.73□□□□□ -0.37
LDHC-208ENST00000544105 INTS5Q6P9B9 1019 aaKnown RBP12.72□□□□□ -0.37
LDHC-208ENST00000544105 FAM196AQ6ZSG2 479 aa12.72□□□□□ -0.37
LDHC-208ENST00000544105 RHPN1Q8TCX5 695 aa12.72□□□□□ -0.37
LDHC-208ENST00000544105 GPATCH3Q96I76 525 aa12.72□□□□□ -0.37
LDHC-208ENST00000544105 ZNF652Q9Y2D9 606 aa12.72□□□□□ -0.37
LDHC-208ENST00000544105 ARFGEF2Q9Y6D5 1785 aa12.71□□□□□ -0.37
LDHC-208ENST00000544105 THSD7AQ9UPZ6 1657 aa12.71□□□□□ -0.37
LDHC-208ENST00000544105 PCCAP05165 728 aaPredicted RBP12.71□□□□□ -0.37
LDHC-208ENST00000544105 HSP90B1P14625 803 aaKnown RBP12.71□□□□□ -0.37
LDHC-208ENST00000544105 EIF5P55010 431 aaKnown RBP12.71□□□□□ -0.37
LDHC-208ENST00000544105 TTC22Q5TAA0 569 aa12.71□□□□□ -0.37
LDHC-208ENST00000544105 C16orf71Q8IYS4 520 aaPredicted RBP12.71□□□□□ -0.37
LDHC-208ENST00000544105 DDRGK1Q96HY6 314 aa12.71□□□□□ -0.37
LDHC-208ENST00000544105 OSBPL3Q9H4L5 887 aa12.71□□□□□ -0.37
LDHC-208ENST00000544105 TBC1D2BQ9UPU7 963 aa12.71□□□□□ -0.37
LDHC-208ENST00000544105 CHMP3Q9Y3E7 222 aa12.71□□□□□ -0.37
LDHC-208ENST00000544105 MX1P20591 662 aa12.7□□□□□ -0.38
LDHC-208ENST00000544105 PDE1AP54750 535 aa12.7□□□□□ -0.38
LDHC-208ENST00000544105 RBM6P78332 1123 aaKnown RBP12.7□□□□□ -0.38
LDHC-208ENST00000544105 ITPK1Q13572 414 aa12.7□□□□□ -0.38
LDHC-208ENST00000544105 GSE1Q14687 1217 aa12.7□□□□□ -0.38
LDHC-208ENST00000544105 RABL6Q3YEC7 729 aaPredicted RBP12.7□□□□□ -0.38
LDHC-208ENST00000544105 RC3H1Q5TC82 1133 aaKnown RBP12.7□□□□□ -0.38
LDHC-208ENST00000544105 KRT27Q7Z3Y8 459 aa12.7□□□□□ -0.38
LDHC-208ENST00000544105 ZBTB38Q8NAP3 1195 aaPredicted RBP12.7□□□□□ -0.38
LDHC-208ENST00000544105 JARID2Q92833 1246 aaPredicted RBP12.7□□□□□ -0.38
LDHC-208ENST00000544105 KAZALD1Q96I82 304 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms