RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 RFX5P48382 616 aaPredicted RBP24.42■■□□□ 1.5
COPS7A-218ENST00000543939 EIF5P55010 431 aaKnown RBP24.42■■□□□ 1.5
COPS7A-218ENST00000543939 HLFQ16534 295 aa24.42■■□□□ 1.5
COPS7A-218ENST00000543939 SBF2Q86WG5 1849 aa24.41■■□□□ 1.5
COPS7A-218ENST00000543939 ERVV-1B6SEH8 477 aa24.41■■□□□ 1.5
COPS7A-218ENST00000543939 MFAP1P55081 439 aaKnown RBP24.41■■□□□ 1.5
COPS7A-218ENST00000543939 HSP90AB3PQ58FF7 597 aa24.41■■□□□ 1.5
COPS7A-218ENST00000543939 DDRGK1Q96HY6 314 aa24.41■■□□□ 1.5
COPS7A-218ENST00000543939 ARXQ96QS3 562 aa24.41■■□□□ 1.5
COPS7A-218ENST00000543939 COPRSQ9NQ92 184 aa24.41■■□□□ 1.5
COPS7A-218ENST00000543939 G3BP1Q13283 466 aaKnown RBP eCLIP24.4■■□□□ 1.5
COPS7A-218ENST00000543939 DZIP3Q86Y13 1208 aaKnown RBP24.4■■□□□ 1.5
COPS7A-218ENST00000543939 NUTM1Q86Y26 1132 aa24.4■■□□□ 1.5
COPS7A-218ENST00000543939 TSHZ3Q63HK5 1081 aa24.39■■□□□ 1.5
COPS7A-218ENST00000543939 PTF1AQ7RTS3 328 aa24.39■■□□□ 1.5
COPS7A-218ENST00000543939 SASH1O94885 1247 aa24.38■■□□□ 1.49
COPS7A-218ENST00000543939 LMBR1LQ6UX01 489 aa24.38■■□□□ 1.49
COPS7A-218ENST00000543939 PCCAP05165 728 aaPredicted RBP24.38■■□□□ 1.49
COPS7A-218ENST00000543939 PTPN12Q05209 780 aaKnown RBP24.38■■□□□ 1.49
COPS7A-218ENST00000543939 RTL5Q5HYW3 569 aaPredicted RBP24.38■■□□□ 1.49
COPS7A-218ENST00000543939 CLASRPQ8N2M8 674 aaKnown RBP24.38■■□□□ 1.49
COPS7A-218ENST00000543939 KLHDC4Q8TBB5 520 aa24.38■■□□□ 1.49
COPS7A-218ENST00000543939 TBC1D2BQ9UPU7 963 aa24.38■■□□□ 1.49
COPS7A-218ENST00000543939 USP42Q9H9J4 1324 aaKnown RBP24.37■■□□□ 1.49
COPS7A-218ENST00000543939 SEPT12Q8IYM1 358 aa24.37■■□□□ 1.49
COPS7A-218ENST00000543939 QTRT2Q9H974 415 aaKnown RBP24.37■■□□□ 1.49
COPS7A-218ENST00000543939 FAM182BQ5T319 152 aa24.36■■□□□ 1.49
COPS7A-218ENST00000543939 NLRP10Q86W26 655 aa24.36■■□□□ 1.49
COPS7A-218ENST00000543939 ZBTB38Q8NAP3 1195 aaPredicted RBP24.35■■□□□ 1.49
COPS7A-218ENST00000543939 C22orf23Q9BZE7 217 aa24.35■■□□□ 1.49
COPS7A-218ENST00000543939 SIL1Q9H173 461 aa24.35■■□□□ 1.49
COPS7A-218ENST00000543939 PI4K2BQ8TCG2 481 aa24.34■■□□□ 1.49
COPS7A-218ENST00000543939 PLA2G12BQ9BX93 195 aa24.34■■□□□ 1.49
COPS7A-218ENST00000543939 AK9Q5TCS8 1911 aa24.34■■□□□ 1.49
COPS7A-218ENST00000543939 EIF5BO60841 1220 aaKnown RBP24.33■■□□□ 1.49
COPS7A-218ENST00000543939 GPTP24298 496 aa24.33■■□□□ 1.49
COPS7A-218ENST00000543939 ZNF34Q8IZ26 560 aa24.33■■□□□ 1.49
COPS7A-218ENST00000543939 LINC00116Q8NCU8 138 aa24.33■■□□□ 1.49
COPS7A-218ENST00000543939 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.33■■□□□ 1.49
COPS7A-218ENST00000543939 TTC41PQ6P2S7 1318 aa24.33■■□□□ 1.49
COPS7A-218ENST00000543939 LY75O60449 1722 aa24.33■■□□□ 1.48
COPS7A-218ENST00000543939 CDHR2Q9BYE9 1310 aa24.32■■□□□ 1.48
COPS7A-218ENST00000543939 FAM89AQ96GI7 184 aa24.32■■□□□ 1.48
COPS7A-218ENST00000543939 MYH3P11055 1940 aa24.31■■□□□ 1.48
COPS7A-218ENST00000543939 BCORQ6W2J9 1755 aa24.31■■□□□ 1.48
COPS7A-218ENST00000543939 CNTNAP4Q9C0A0 1308 aa24.31■■□□□ 1.48
COPS7A-218ENST00000543939 CAMTA2O94983 1202 aa24.31■■□□□ 1.48
COPS7A-218ENST00000543939 CASC1Q6TDU7 716 aa24.31■■□□□ 1.48
COPS7A-218ENST00000543939 AACSQ86V21 672 aa24.31■■□□□ 1.48
COPS7A-218ENST00000543939 CHMP3Q9Y3E7 222 aa24.31■■□□□ 1.48
COPS7A-218ENST00000543939 IFIT2P09913 472 aaKnown RBP24.3■■□□□ 1.48
COPS7A-218ENST00000543939 RBM25P49756 843 aaKnown RBP24.3■■□□□ 1.48
COPS7A-218ENST00000543939 EAF2Q96CJ1 260 aaPredicted RBP24.3■■□□□ 1.48
COPS7A-218ENST00000543939 BRWD3Q6RI45 1802 aa24.3■■□□□ 1.48
COPS7A-218ENST00000543939 UBN2Q6ZU65 1347 aa24.3■■□□□ 1.48
COPS7A-218ENST00000543939 ECHDC1Q9NTX5 307 aa24.29■■□□□ 1.48
COPS7A-218ENST00000543939 TAF1LQ8IZX4 1826 aa24.29■■□□□ 1.48
COPS7A-218ENST00000543939 CSF1RP07333 972 aa24.28■■□□□ 1.48
COPS7A-218ENST00000543939 TRIM6-TRIM34B2RNG4 842 aa24.27■■□□□ 1.48
COPS7A-218ENST00000543939 GLRX3O76003 335 aaKnown RBP24.27■■□□□ 1.48
COPS7A-218ENST00000543939 KCNQ4P56696 695 aa24.27■■□□□ 1.48
COPS7A-218ENST00000543939 GPATCH3Q96I76 525 aa24.27■■□□□ 1.48
COPS7A-218ENST00000543939 ERC2O15083 957 aa24.27■■□□□ 1.48
COPS7A-218ENST00000543939 RC3H1Q5TC82 1133 aaKnown RBP24.27■■□□□ 1.48
COPS7A-218ENST00000543939 SYNE4Q8N205 404 aa24.27■■□□□ 1.48
COPS7A-218ENST00000543939 RILPL2Q969X0 211 aa24.27■■□□□ 1.48
COPS7A-218ENST00000543939 TRMT112Q9UI30 125 aaKnown RBP24.27■■□□□ 1.48
COPS7A-218ENST00000543939 TFCP2Q12800 502 aa24.26■■□□□ 1.47
COPS7A-218ENST00000543939 ATG9AQ7Z3C6 839 aa24.26■■□□□ 1.47
COPS7A-218ENST00000543939 CCDC8Q9H0W5 538 aaPredicted RBP24.25■■□□□ 1.47
COPS7A-218ENST00000543939 CCNL1Q9UK58 526 aaPredicted RBP24.24■■□□□ 1.47
COPS7A-218ENST00000543939 IRS4O14654 1257 aaPredicted RBP24.24■■□□□ 1.47
COPS7A-218ENST00000543939 CIAO1O76071 339 aa24.24■■□□□ 1.47
COPS7A-218ENST00000543939 CHMLP26374 656 aa24.24■■□□□ 1.47
COPS7A-218ENST00000543939 TNNI3KQ59H18 835 aa24.24■■□□□ 1.47
COPS7A-218ENST00000543939 BCL11BQ9C0K0 894 aaPredicted RBP24.24■■□□□ 1.47
COPS7A-218ENST00000543939 TLR7Q9NYK1 1049 aaKnown RBP24.24■■□□□ 1.47
COPS7A-218ENST00000543939 FPGT-TNNI3KV9GXZ4 949 aa24.24■■□□□ 1.47
COPS7A-218ENST00000543939 EYA2O00167 538 aa24.23■■□□□ 1.47
COPS7A-218ENST00000543939 IL15P40933 162 aaPredicted RBP24.23■■□□□ 1.47
COPS7A-218ENST00000543939 CCDC57Q2TAC2 916 aa24.23■■□□□ 1.47
COPS7A-218ENST00000543939 PARP10Q53GL7 1025 aa24.23■■□□□ 1.47
COPS7A-218ENST00000543939 SUSD4Q5VX71 490 aa24.22■■□□□ 1.47
COPS7A-218ENST00000543939 CNTROBQ8N137 903 aa24.22■■□□□ 1.47
COPS7A-218ENST00000543939 ZNF594Q96JF6 807 aaPredicted RBP24.22■■□□□ 1.47
COPS7A-218ENST00000543939 SCN7AQ01118 1682 aa24.22■■□□□ 1.47
COPS7A-218ENST00000543939 RGL2O15211 777 aa24.21■■□□□ 1.47
COPS7A-218ENST00000543939 RPS6KA4O75676 772 aa24.21■■□□□ 1.47
COPS7A-218ENST00000543939 MAP4K4O95819 1239 aaPredicted RBP24.21■■□□□ 1.47
COPS7A-218ENST00000543939 CTSWP56202 376 aa24.21■■□□□ 1.47
COPS7A-218ENST00000543939 CLEC4GQ6UXB4 293 aa24.21■■□□□ 1.47
COPS7A-218ENST00000543939 TTLL11Q8NHH1 800 aa24.21■■□□□ 1.47
COPS7A-218ENST00000543939 USP26Q9BXU7 913 aa24.21■■□□□ 1.47
COPS7A-218ENST00000543939 FBXO3Q9UK99 471 aa24.21■■□□□ 1.47
COPS7A-218ENST00000543939 PDE8AO60658 829 aa24.21■■□□□ 1.47
COPS7A-218ENST00000543939 AK7Q96M32 723 aa24.21■■□□□ 1.47
COPS7A-218ENST00000543939 ESYT1Q9BSJ8 1104 aa24.21■■□□□ 1.47
COPS7A-218ENST00000543939 GPR108Q9NPR9 543 aa24.21■■□□□ 1.47
COPS7A-218ENST00000543939 ZNF652Q9Y2D9 606 aa24.21■■□□□ 1.47
COPS7A-218ENST00000543939 LAMB2P55268 1798 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms