RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 FAM177BA6PVY3 158 aa14.95□□□□□ -0.02
DDB1-223ENST00000543658 IGKV5-2P06315 115 aa14.95□□□□□ -0.02
DDB1-223ENST00000543658 UBTFL1P0CB47 393 aaPredicted RBP14.95□□□□□ -0.02
DDB1-223ENST00000543658 GTF2E1P29083 439 aaPredicted RBP14.95□□□□□ -0.02
DDB1-223ENST00000543658 GCKRQ14397 625 aa14.95□□□□□ -0.02
DDB1-223ENST00000543658 R3HDM1Q15032 1099 aaKnown RBP14.95□□□□□ -0.02
DDB1-223ENST00000543658 TBC1D9BQ66K14 1250 aa14.95□□□□□ -0.02
DDB1-223ENST00000543658 ZNF34Q8IZ26 560 aa14.95□□□□□ -0.02
DDB1-223ENST00000543658 NYXQ9GZU5 481 aa14.95□□□□□ -0.02
DDB1-223ENST00000543658 GRM8O00222 908 aa14.94□□□□□ -0.02
DDB1-223ENST00000543658 TRIM28Q13263 835 aaKnown RBP14.94□□□□□ -0.02
DDB1-223ENST00000543658 FKBP8Q14318 412 aa14.94□□□□□ -0.02
DDB1-223ENST00000543658 NLRP10Q86W26 655 aa14.94□□□□□ -0.02
DDB1-223ENST00000543658 SLC16A10Q8TF71 515 aa14.94□□□□□ -0.02
DDB1-223ENST00000543658 UTP14AQ9BVJ6 771 aaKnown RBP14.94□□□□□ -0.02
DDB1-223ENST00000543658 BCL2L12Q9HB09 334 aa14.94□□□□□ -0.02
DDB1-223ENST00000543658 TRMT112Q9UI30 125 aaKnown RBP14.94□□□□□ -0.02
DDB1-223ENST00000543658 IBTKQ9P2D0 1353 aaPredicted RBP14.94□□□□□ -0.02
DDB1-223ENST00000543658 DDX60Q8IY21 1712 aaKnown RBP14.94□□□□□ -0.02
DDB1-223ENST00000543658 UBN2Q6ZU65 1347 aa14.93□□□□□ -0.02
DDB1-223ENST00000543658 HSP90B1P14625 803 aaKnown RBP14.93□□□□□ -0.02
DDB1-223ENST00000543658 AAMPQ13685 434 aa14.93□□□□□ -0.02
DDB1-223ENST00000543658 MSL1Q68DK7 614 aa14.93□□□□□ -0.02
DDB1-223ENST00000543658 NBPF5PQ86XG9 351 aaPredicted RBP14.93□□□□□ -0.02
DDB1-223ENST00000543658 PCCAP05165 728 aaPredicted RBP14.92□□□□□ -0.02
DDB1-223ENST00000543658 NFIXQ14938 502 aa14.92□□□□□ -0.02
DDB1-223ENST00000543658 UBE3BQ7Z3V4 1068 aa14.92□□□□□ -0.02
DDB1-223ENST00000543658 ZBTB38Q8NAP3 1195 aaPredicted RBP14.92□□□□□ -0.02
DDB1-223ENST00000543658 EXOC6Q8TAG9 804 aa14.92□□□□□ -0.02
DDB1-223ENST00000543658 MEIS3Q99687 375 aa14.92□□□□□ -0.02
DDB1-223ENST00000543658 PARP3Q9Y6F1 533 aa14.92□□□□□ -0.02
DDB1-223ENST00000543658 NRXN2Q9P2S2 1712 aa14.92□□□□□ -0.02
DDB1-223ENST00000543658 SH3TC1Q8TE82 1336 aa14.92□□□□□ -0.02
DDB1-223ENST00000543658 PSDA5PKW4 1024 aaPredicted RBP14.91□□□□□ -0.02
DDB1-223ENST00000543658 GNAI2P04899 355 aa14.91□□□□□ -0.02
DDB1-223ENST00000543658 ST5P78524 1137 aa14.91□□□□□ -0.02
DDB1-223ENST00000543658 RTL5Q5HYW3 569 aaPredicted RBP14.91□□□□□ -0.02
DDB1-223ENST00000543658 SUSD4Q5VX71 490 aa14.91□□□□□ -0.02
DDB1-223ENST00000543658 TPTE2Q6XPS3 522 aa14.91□□□□□ -0.02
DDB1-223ENST00000543658 ZBTB7BO15156 539 aaPredicted RBP14.9□□□□□ -0.02
DDB1-223ENST00000543658 CNBD1Q8NA66 436 aa14.9□□□□□ -0.02
DDB1-223ENST00000543658 USP44Q9H0E7 712 aa14.9□□□□□ -0.02
DDB1-223ENST00000543658 CDHR2Q9BYE9 1310 aa14.9□□□□□ -0.02
DDB1-223ENST00000543658 NTSR2O95665 410 aa14.89□□□□□ -0.03
DDB1-223ENST00000543658 SERPINB2P05120 415 aa14.89□□□□□ -0.03
DDB1-223ENST00000543658 MMP10P09238 476 aa14.89□□□□□ -0.03
DDB1-223ENST00000543658 NBPF7P0C2Y1 421 aaPredicted RBP14.89□□□□□ -0.03
DDB1-223ENST00000543658 POLD1P28340 1107 aa14.89□□□□□ -0.03
DDB1-223ENST00000543658 ERICH6BQ5W0A0 696 aa14.89□□□□□ -0.03
DDB1-223ENST00000543658 FAM89AQ96GI7 184 aa14.89□□□□□ -0.03
DDB1-223ENST00000543658 UTYO14607 1347 aa14.89□□□□□ -0.03
DDB1-223ENST00000543658 H7C1W4 665 aa14.88□□□□□ -0.03
DDB1-223ENST00000543658 IRS4O14654 1257 aaPredicted RBP14.88□□□□□ -0.03
DDB1-223ENST00000543658 TM4SF1P30408 202 aa14.88□□□□□ -0.03
DDB1-223ENST00000543658 NUTM1Q86Y26 1132 aa14.88□□□□□ -0.03
DDB1-223ENST00000543658 JARID2Q92833 1246 aaPredicted RBP14.88□□□□□ -0.03
DDB1-223ENST00000543658 MTFR1LQ9H019 292 aa14.88□□□□□ -0.03
DDB1-223ENST00000543658 C1orf115Q9H7X2 142 aa14.88□□□□□ -0.03
DDB1-223ENST00000543658 LRRFIP2Q9Y608 721 aaKnown RBP14.88□□□□□ -0.03
DDB1-223ENST00000543658 SPEF2Q9C093 1822 aa14.87□□□□□ -0.03
DDB1-223ENST00000543658 ANKRD31Q8N7Z5 1873 aa14.87□□□□□ -0.03
DDB1-223ENST00000543658 POLRMTO00411 1230 aaKnown RBP14.87□□□□□ -0.03
DDB1-223ENST00000543658 ZBTB7AO95365 584 aa14.87□□□□□ -0.03
DDB1-223ENST00000543658 SUCLG2Q96I99 432 aa14.87□□□□□ -0.03
DDB1-223ENST00000543658 PDGFDQ9GZP0 370 aaPredicted RBP14.87□□□□□ -0.03
DDB1-223ENST00000543658 ZBTB40Q9NUA8 1239 aa14.87□□□□□ -0.03
DDB1-223ENST00000543658 CHMP3Q9Y3E7 222 aa14.87□□□□□ -0.03
DDB1-223ENST00000543658 CACNA1SQ13698 1873 aa14.86□□□□□ -0.03
DDB1-223ENST00000543658 PDE8AO60658 829 aa14.86□□□□□ -0.03
DDB1-223ENST00000543658 DDR1Q08345 913 aa14.86□□□□□ -0.03
DDB1-223ENST00000543658 ERFEQ4G0M1 354 aa14.86□□□□□ -0.03
DDB1-223ENST00000543658 TNRC6CQ9HCJ0 1690 aaKnown RBP14.86□□□□□ -0.03
DDB1-223ENST00000543658 PRR5LQ6MZQ0 368 aa14.85□□□□□ -0.03
DDB1-223ENST00000543658 ABCC12Q96J65 1359 aa14.85□□□□□ -0.03
DDB1-223ENST00000543658 RIC1Q4ADV7 1423 aa14.84□□□□□ -0.03
DDB1-223ENST00000543658 HMMRO75330 724 aa14.84□□□□□ -0.03
DDB1-223ENST00000543658 HCLS1P14317 486 aaPredicted RBP14.84□□□□□ -0.03
DDB1-223ENST00000543658 CASP7P55210 303 aa14.84□□□□□ -0.03
DDB1-223ENST00000543658 NLRP3Q96P20 1036 aa14.84□□□□□ -0.03
DDB1-223ENST00000543658 PLA2G12BQ9BX93 195 aa14.84□□□□□ -0.03
DDB1-223ENST00000543658 BICC1Q9H694 974 aaKnown RBP14.84□□□□□ -0.03
DDB1-223ENST00000543658 ATF5Q9Y2D1 282 aaPredicted RBP14.84□□□□□ -0.03
DDB1-223ENST00000543658 KIF13BQ9NQT8 1826 aa14.84□□□□□ -0.03
DDB1-223ENST00000543658 CTSWP56202 376 aa14.83□□□□□ -0.04
DDB1-223ENST00000543658 RPAP2Q8IXW5 612 aaPredicted RBP14.83□□□□□ -0.04
DDB1-223ENST00000543658 CCDC152Q4G0S7 254 aa14.82□□□□□ -0.04
DDB1-223ENST00000543658 TAF7LQ5H9L4 462 aa14.82□□□□□ -0.04
DDB1-223ENST00000543658 CEP85Q6P2H3 762 aa14.82□□□□□ -0.04
DDB1-223ENST00000543658 LMBR1LQ6UX01 489 aa14.82□□□□□ -0.04
DDB1-223ENST00000543658 SYNE4Q8N205 404 aa14.82□□□□□ -0.04
DDB1-223ENST00000543658 CCDC24Q8N4L8 307 aa14.82□□□□□ -0.04
DDB1-223ENST00000543658 DLEC1Q9Y238 1755 aa14.82□□□□□ -0.04
DDB1-223ENST00000543658 COL11A2P13942 1736 aaPredicted RBP14.81□□□□□ -0.04
DDB1-223ENST00000543658 SRGAP3O43295 1099 aa14.81□□□□□ -0.04
DDB1-223ENST00000543658 PDE6BP35913 854 aa14.81□□□□□ -0.04
DDB1-223ENST00000543658 CCDC57Q2TAC2 916 aa14.81□□□□□ -0.04
DDB1-223ENST00000543658 SLC10A5Q5PT55 438 aa14.81□□□□□ -0.04
DDB1-223ENST00000543658 ANKRD44Q8N8A2 993 aa14.81□□□□□ -0.04
DDB1-223ENST00000543658 CCDC136Q96JN2 1154 aa14.81□□□□□ -0.04
DDB1-223ENST00000543658 RWDD1Q9H446 243 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms