RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 SASH1O94885 1247 aa16.17■□□□□ 0.18
PPME1-208ENST00000543525 KAZALD1Q96I82 304 aa16.17■□□□□ 0.18
PPME1-208ENST00000543525 EAF2Q96CJ1 260 aaPredicted RBP16.17■□□□□ 0.18
PPME1-208ENST00000543525 NPHP3Q7Z494 1330 aa16.16■□□□□ 0.18
PPME1-208ENST00000543525 LRP6O75581 1613 aa16.16■□□□□ 0.18
PPME1-208ENST00000543525 GADD45BO75293 160 aaPredicted RBP16.16■□□□□ 0.18
PPME1-208ENST00000543525 IGKV5-2P06315 115 aa16.16■□□□□ 0.18
PPME1-208ENST00000543525 SYT1P21579 422 aa16.16■□□□□ 0.18
PPME1-208ENST00000543525 KCNJ4P48050 445 aa16.16■□□□□ 0.18
PPME1-208ENST00000543525 ZC3H6P61129 1189 aaKnown RBP16.16■□□□□ 0.18
PPME1-208ENST00000543525 NECTIN1Q15223 517 aa16.16■□□□□ 0.18
PPME1-208ENST00000543525 CSPP1Q1MSJ5 1256 aa16.16■□□□□ 0.18
PPME1-208ENST00000543525 FOXD4L6Q3SYB3 417 aaPredicted RBP16.16■□□□□ 0.18
PPME1-208ENST00000543525 FOXD4L3Q6VB84 417 aaPredicted RBP16.16■□□□□ 0.18
PPME1-208ENST00000543525 C19orf44Q9H6X5 657 aa16.16■□□□□ 0.18
PPME1-208ENST00000543525 NLRP2Q9NX02 1062 aa16.16■□□□□ 0.18
PPME1-208ENST00000543525 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.16■□□□□ 0.182e-7■■□□□ 13.2
PPME1-208ENST00000543525 NEURL1BA8MQ27 555 aa16.15■□□□□ 0.18
PPME1-208ENST00000543525 LETM1O95202 739 aaPredicted RBP16.15■□□□□ 0.18
PPME1-208ENST00000543525 F13A1P00488 732 aa16.15■□□□□ 0.18
PPME1-208ENST00000543525 PHKG2P15735 406 aa16.15■□□□□ 0.18
PPME1-208ENST00000543525 PSMA5P28066 241 aa16.15■□□□□ 0.18
PPME1-208ENST00000543525 METTL22Q9BUU2 404 aaPredicted RBP16.15■□□□□ 0.18
PPME1-208ENST00000543525 CCDC8Q9H0W5 538 aaPredicted RBP16.15■□□□□ 0.18
PPME1-208ENST00000543525 GDPD2Q9HCC8 539 aa16.15■□□□□ 0.18
PPME1-208ENST00000543525 SNRKQ9NRH2 765 aa16.15■□□□□ 0.18
PPME1-208ENST00000543525 RBM8AQ9Y5S9 174 aaKnown RBP16.15■□□□□ 0.18
PPME1-208ENST00000543525 RGPD5Q99666 1765 aa16.15■□□□□ 0.18
PPME1-208ENST00000543525 NMIQ13287 307 aaPredicted RBP16.15■□□□□ 0.18
PPME1-208ENST00000543525 SLC39A6Q13433 755 aa16.15■□□□□ 0.18
PPME1-208ENST00000543525 GCKRQ14397 625 aa16.15■□□□□ 0.18
PPME1-208ENST00000543525 MEX3CQ5U5Q3 659 aaKnown RBP16.15■□□□□ 0.18
PPME1-208ENST00000543525 CREB3L3Q68CJ9 461 aa16.15■□□□□ 0.18
PPME1-208ENST00000543525 XAGE3Q8WTP9 111 aa16.15■□□□□ 0.18
PPME1-208ENST00000543525 KDM6AO15550 1401 aaPredicted RBP16.14■□□□□ 0.17
PPME1-208ENST00000543525 SCN11AQ9UI33 1791 aa16.14■□□□□ 0.17
PPME1-208ENST00000543525 ABCC6O95255 1503 aa16.14■□□□□ 0.17
PPME1-208ENST00000543525 COL16A1Q07092 1604 aaPredicted RBP16.14■□□□□ 0.17
PPME1-208ENST00000543525 PDIA4P13667 645 aaKnown RBP16.14■□□□□ 0.17
PPME1-208ENST00000543525 MYL6BP14649 208 aa16.14■□□□□ 0.17
PPME1-208ENST00000543525 CPA1P15085 419 aa16.14■□□□□ 0.17
PPME1-208ENST00000543525 RXRBP28702 533 aa16.14■□□□□ 0.17
PPME1-208ENST00000543525 ADCK5Q3MIX3 580 aa16.14■□□□□ 0.17
PPME1-208ENST00000543525 CCDC183Q5T5S1 534 aa16.14■□□□□ 0.17
PPME1-208ENST00000543525 CCDC83Q8IWF9 413 aa16.14■□□□□ 0.17
PPME1-208ENST00000543525 IFNL2Q8IZJ0 200 aa16.14■□□□□ 0.17
PPME1-208ENST00000543525 MAP4K1Q92918 833 aa16.14■□□□□ 0.17
PPME1-208ENST00000543525 MYD88Q99836 296 aa16.14■□□□□ 0.17
PPME1-208ENST00000543525 LARP6Q9BRS8 491 aaKnown RBP16.14■□□□□ 0.17
PPME1-208ENST00000543525 CCDC39Q9UFE4 941 aa16.14■□□□□ 0.17
PPME1-208ENST00000543525 NOL7Q9UMY1 257 aaKnown RBP16.14■□□□□ 0.17
PPME1-208ENST00000543525 PLEKHG2Q9H7P9 1386 aa16.14■□□□□ 0.17
PPME1-208ENST00000543525 ALS2Q96Q42 1657 aa16.14■□□□□ 0.17
PPME1-208ENST00000543525 GJB2P29033 226 aa16.13■□□□□ 0.17
PPME1-208ENST00000543525 UBE2HP62256 183 aa16.13■□□□□ 0.17
PPME1-208ENST00000543525 RNF20Q5VTR2 975 aa16.13■□□□□ 0.17
PPME1-208ENST00000543525 COPS6Q7L5N1 327 aa16.13■□□□□ 0.17
PPME1-208ENST00000543525 FSD1Q9BTV5 496 aa16.13■□□□□ 0.17
PPME1-208ENST00000543525 CNPY2Q9Y2B0 182 aa16.13■□□□□ 0.17
PPME1-208ENST00000543525 C5P01031 1676 aa16.13■□□□□ 0.17
PPME1-208ENST00000543525 MRC1P22897 1456 aa16.13■□□□□ 0.17
PPME1-208ENST00000543525 TTC5Q8N0Z6 440 aa16.13■□□□□ 0.17
PPME1-208ENST00000543525 NFATC2IPQ8NCF5 419 aa16.13■□□□□ 0.17
PPME1-208ENST00000543525 SIL1Q9H173 461 aa16.13■□□□□ 0.17
PPME1-208ENST00000543525 LARGE1O95461 756 aa16.12■□□□□ 0.17
PPME1-208ENST00000543525 SNRPA1P09661 255 aaKnown RBP16.12■□□□□ 0.17
PPME1-208ENST00000543525 MCM5P33992 734 aa16.12■□□□□ 0.17
PPME1-208ENST00000543525 UVSSAQ2YD98 709 aa16.12■□□□□ 0.17
PPME1-208ENST00000543525 KLHL34Q8N239 644 aa16.12■□□□□ 0.17
PPME1-208ENST00000543525 FAM184AQ8NB25 1140 aa16.12■□□□□ 0.17
PPME1-208ENST00000543525 FAM227BQ96M60 508 aa16.12■□□□□ 0.17
PPME1-208ENST00000543525 BOLA2Q9H3K6 86 aa16.12■□□□□ 0.17
PPME1-208ENST00000543525 SLC27A2O14975 620 aa16.11■□□□□ 0.17
PPME1-208ENST00000543525 ADRA2BP18089 450 aa16.11■□□□□ 0.17
PPME1-208ENST00000543525 ANKRD1Q15327 319 aa16.11■□□□□ 0.17
PPME1-208ENST00000543525 ANKRD13DQ6ZTN6 518 aa16.11■□□□□ 0.17
PPME1-208ENST00000543525 RNF214Q8ND24 703 aa16.11■□□□□ 0.17
PPME1-208ENST00000543525 TLR7Q9NYK1 1049 aaKnown RBP16.11■□□□□ 0.17
PPME1-208ENST00000543525 CSB-PGBD3P0DP91 1061 aa16.11■□□□□ 0.17
PPME1-208ENST00000543525 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.11■□□□□ 0.17
PPME1-208ENST00000543525 ZNF496Q96IT1 587 aaPredicted RBP16.11■□□□□ 0.17
PPME1-208ENST00000543525 DCAF5Q96JK2 942 aa16.11■□□□□ 0.17
PPME1-208ENST00000543525 ALDH8A1Q9H2A2 487 aaPredicted RBP16.11■□□□□ 0.17
PPME1-208ENST00000543525 COPRSQ9NQ92 184 aa16.11■□□□□ 0.17
PPME1-208ENST00000543525 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.11■□□□□ 0.17
PPME1-208ENST00000543525 ZNF500O60304 480 aaPredicted RBP16.1■□□□□ 0.17
PPME1-208ENST00000543525 OFD1O75665 1012 aa16.1■□□□□ 0.17
PPME1-208ENST00000543525 TPM2P07951 284 aa16.1■□□□□ 0.17
PPME1-208ENST00000543525 ATF3P18847 181 aa16.1■□□□□ 0.17
PPME1-208ENST00000543525 FMNL2Q96PY5 1086 aa16.1■□□□□ 0.17
PPME1-208ENST00000543525 MTMR6Q9Y217 621 aa16.1■□□□□ 0.17
PPME1-208ENST00000543525 COL15A1P39059 1388 aa16.1■□□□□ 0.17
PPME1-208ENST00000543525 A0A0D9SFI3 127 aa16.09■□□□□ 0.17
PPME1-208ENST00000543525 ME3Q16798 604 aa16.09■□□□□ 0.17
PPME1-208ENST00000543525 EPHA10Q5JZY3 1008 aa16.09■□□□□ 0.17
PPME1-208ENST00000543525 HMG20BQ9P0W2 317 aa16.09■□□□□ 0.17
PPME1-208ENST00000543525 MEGF6O75095 1541 aa16.09■□□□□ 0.17
PPME1-208ENST00000543525 MED23Q9ULK4 1368 aa16.09■□□□□ 0.17
PPME1-208ENST00000543525 ATP5JP18859 108 aa16.09■□□□□ 0.17
PPME1-208ENST00000543525 BLOC1S2Q6QNY1 142 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms