RNA–Protein interactions for RNA: ENST00000543341.6

GTF2H3-212, Transcript of general transcription factor IIH subunit 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H3, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF2H3-212	ENST00000543341	DZIP1L	Q8IYY4	767 aa	Known RBP	9.19	□□□□□ -0.94
GTF2H3-212	ENST00000543341	UBE2Q2	Q8WVN8	375 aa		9.19	□□□□□ -0.94
GTF2H3-212	ENST00000543341	DUOX1	Q9NRD9	1551 aa		9.19	□□□□□ -0.94
GTF2H3-212	ENST00000543341	NEURL1B	A8MQ27	555 aa		9.19	□□□□□ -0.94
GTF2H3-212	ENST00000543341		H7C1W4	665 aa		9.19	□□□□□ -0.94
GTF2H3-212	ENST00000543341	CCNL1	Q9UK58	526 aa	Predicted RBP	9.19	□□□□□ -0.94
GTF2H3-212	ENST00000543341	COG6	Q9Y2V7	657 aa		9.19	□□□□□ -0.94
GTF2H3-212	ENST00000543341	TMEM57	Q8N5G2	664 aa		9.18	□□□□□ -0.94
GTF2H3-212	ENST00000543341	LINS1	Q8NG48	757 aa		9.18	□□□□□ -0.94
GTF2H3-212	ENST00000543341	AK7	Q96M32	723 aa		9.18	□□□□□ -0.94
GTF2H3-212	ENST00000543341	BCL2L13	Q9BXK5	485 aa		9.18	□□□□□ -0.94
GTF2H3-212	ENST00000543341	FER1L6	Q2WGJ9	1857 aa		9.18	□□□□□ -0.94
GTF2H3-212	ENST00000543341		A0A087WZG4	1122 aa		9.18	□□□□□ -0.94
GTF2H3-212	ENST00000543341	TTLL7	Q6ZT98	887 aa		9.18	□□□□□ -0.94
GTF2H3-212	ENST00000543341	PANK1	Q8TE04	598 aa		9.18	□□□□□ -0.94
GTF2H3-212	ENST00000543341	XAGE3	Q8WTP9	111 aa		9.18	□□□□□ -0.94
GTF2H3-212	ENST00000543341	DNAAF4	Q8WXU2	420 aa		9.18	□□□□□ -0.94
GTF2H3-212	ENST00000543341	USP44	Q9H0E7	712 aa		9.18	□□□□□ -0.94
GTF2H3-212	ENST00000543341	POLA2	Q14181	598 aa		9.18	□□□□□ -0.94
GTF2H3-212	ENST00000543341	STK31	Q9BXU1	1019 aa		9.18	□□□□□ -0.94
GTF2H3-212	ENST00000543341	TAF1	P21675	1872 aa		9.18	□□□□□ -0.94
GTF2H3-212	ENST00000543341	CACNA1S	Q13698	1873 aa		9.18	□□□□□ -0.94
GTF2H3-212	ENST00000543341	MAST2	Q6P0Q8	1798 aa		9.17	□□□□□ -0.94
GTF2H3-212	ENST00000543341	TCIRG1	Q13488	830 aa		9.17	□□□□□ -0.94
GTF2H3-212	ENST00000543341	SLC10A5	Q5PT55	438 aa		9.17	□□□□□ -0.94
GTF2H3-212	ENST00000543341	COPS6	Q7L5N1	327 aa		9.17	□□□□□ -0.94
GTF2H3-212	ENST00000543341	PTCD1	O75127	700 aa	Known RBP	9.17	□□□□□ -0.94
GTF2H3-212	ENST00000543341	HDAC1	Q13547	482 aa	Predicted RBP	9.17	□□□□□ -0.94
GTF2H3-212	ENST00000543341	ANKRD13D	Q6ZTN6	518 aa		9.17	□□□□□ -0.94
GTF2H3-212	ENST00000543341	CLUAP1	Q96AJ1	413 aa		9.17	□□□□□ -0.94
GTF2H3-212	ENST00000543341	NTSR2	O95665	410 aa		9.16	□□□□□ -0.94
GTF2H3-212	ENST00000543341	SIRT2	Q8IXJ6	389 aa		9.16	□□□□□ -0.94
GTF2H3-212	ENST00000543341	CCDC191	Q8NCU4	936 aa		9.16	□□□□□ -0.94
GTF2H3-212	ENST00000543341	SGIP1	Q9BQI5	828 aa		9.16	□□□□□ -0.94
GTF2H3-212	ENST00000543341	PI4KAP2	A4QPH2	592 aa		9.16	□□□□□ -0.94
GTF2H3-212	ENST00000543341	GCKR	Q14397	625 aa		9.16	□□□□□ -0.94
GTF2H3-212	ENST00000543341	L1TD1	Q5T7N2	865 aa	Known RBP	9.16	□□□□□ -0.94
GTF2H3-212	ENST00000543341	PI4KAP1	Q8N8J0	262 aa		9.16	□□□□□ -0.94
GTF2H3-212	ENST00000543341	DDX19B	Q9UMR2	479 aa		9.16	□□□□□ -0.94
GTF2H3-212	ENST00000543341	MAP3K2	Q9Y2U5	619 aa		9.16	□□□□□ -0.94
GTF2H3-212	ENST00000543341	ELL2	O00472	640 aa	Predicted RBP	9.16	□□□□□ -0.94
GTF2H3-212	ENST00000543341	CSF1R	P07333	972 aa		9.16	□□□□□ -0.94
GTF2H3-212	ENST00000543341	HLF	Q16534	295 aa		9.16	□□□□□ -0.94
GTF2H3-212	ENST00000543341	AKAP11	Q9UKA4	1901 aa		9.16	□□□□□ -0.94
GTF2H3-212	ENST00000543341	FOXO4	P98177	505 aa		9.15	□□□□□ -0.94
GTF2H3-212	ENST00000543341	ANKRD44	Q8N8A2	993 aa		9.15	□□□□□ -0.94
GTF2H3-212	ENST00000543341	ARHGEF1	Q92888	912 aa	Known RBP	9.15	□□□□□ -0.94
GTF2H3-212	ENST00000543341	GYS1	P13807	737 aa		9.15	□□□□□ -0.94
GTF2H3-212	ENST00000543341	EZH2	Q15910	746 aa	Known RBP	9.15	□□□□□ -0.94
GTF2H3-212	ENST00000543341	NLRP10	Q86W26	655 aa		9.15	□□□□□ -0.94
GTF2H3-212	ENST00000543341	DICER1	Q9UPY3	1922 aa	Known RBP	9.15	□□□□□ -0.95
GTF2H3-212	ENST00000543341	PCCA	P05165	728 aa	Predicted RBP	9.15	□□□□□ -0.95
GTF2H3-212	ENST00000543341	RFX5	P48382	616 aa	Predicted RBP	9.15	□□□□□ -0.95
GTF2H3-212	ENST00000543341	FAM43A	Q8N2R8	423 aa		9.15	□□□□□ -0.95
GTF2H3-212	ENST00000543341	FLAD1	Q8NFF5	587 aa		9.15	□□□□□ -0.95
GTF2H3-212	ENST00000543341	CARMIL3	Q8ND23	1372 aa		9.14	□□□□□ -0.95
GTF2H3-212	ENST00000543341	DDX58	O95786	925 aa	Known RBP	9.14	□□□□□ -0.95
GTF2H3-212	ENST00000543341	APBA3	O96018	575 aa		9.14	□□□□□ -0.95
GTF2H3-212	ENST00000543341	MYH13	Q9UKX3	1938 aa		9.14	□□□□□ -0.95
GTF2H3-212	ENST00000543341	KAT6B	Q8WYB5	2073 aa		9.14	□□□□□ -0.95
GTF2H3-212	ENST00000543341	ANXA1	P04083	346 aa		9.14	□□□□□ -0.95
GTF2H3-212	ENST00000543341	SLC15A2	Q16348	729 aa		9.14	□□□□□ -0.95
GTF2H3-212	ENST00000543341	HSP90AB3P	Q58FF7	597 aa		9.14	□□□□□ -0.95
GTF2H3-212	ENST00000543341	SPRYD3	Q8NCJ5	442 aa		9.14	□□□□□ -0.95
GTF2H3-212	ENST00000543341	RBM42	Q9BTD8	480 aa	Known RBP	9.14	□□□□□ -0.95
GTF2H3-212	ENST00000543341	GZF1	Q9H116	711 aa	Predicted RBP	9.14	□□□□□ -0.95
GTF2H3-212	ENST00000543341	C8orf34	Q49A92	452 aa		9.13	□□□□□ -0.95
GTF2H3-212	ENST00000543341	ILDR2	Q71H61	639 aa		9.13	□□□□□ -0.95
GTF2H3-212	ENST00000543341	SALL3	Q9BXA9	1300 aa		9.13	□□□□□ -0.95
GTF2H3-212	ENST00000543341	DZIP3	Q86Y13	1208 aa	Known RBP	9.13	□□□□□ -0.95
GTF2H3-212	ENST00000543341	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	9.13	□□□□□ -0.95
GTF2H3-212	ENST00000543341	MYH7	P12883	1935 aa		9.13	□□□□□ -0.95
GTF2H3-212	ENST00000543341	FOCAD	Q5VW36	1801 aa		9.13	□□□□□ -0.95
GTF2H3-212	ENST00000543341		F6X3S4	739 aa		9.13	□□□□□ -0.95
GTF2H3-212	ENST00000543341	IGHD	P01880	384 aa		9.13	□□□□□ -0.95
GTF2H3-212	ENST00000543341	EIF2S2	P20042	333 aa	Known RBP	9.13	□□□□□ -0.95
GTF2H3-212	ENST00000543341	CRY2	Q49AN0	593 aa		9.13	□□□□□ -0.95
GTF2H3-212	ENST00000543341	PARP10	Q53GL7	1025 aa		9.13	□□□□□ -0.95
GTF2H3-212	ENST00000543341	COL23A1	Q86Y22	540 aa	Predicted RBP	9.13	□□□□□ -0.95
GTF2H3-212	ENST00000543341	SSH3	Q8TE77	659 aa		9.13	□□□□□ -0.95
GTF2H3-212	ENST00000543341	SYTL4	Q96C24	671 aa	Predicted RBP	9.13	□□□□□ -0.95
GTF2H3-212	ENST00000543341	IRS2	Q9Y4H2	1338 aa		9.13	□□□□□ -0.95
GTF2H3-212	ENST00000543341	ABCC12	Q96J65	1359 aa		9.12	□□□□□ -0.95
GTF2H3-212	ENST00000543341	POLRMT	O00411	1230 aa	Known RBP	9.12	□□□□□ -0.95
GTF2H3-212	ENST00000543341	CEP85	Q6P2H3	762 aa		9.12	□□□□□ -0.95
GTF2H3-212	ENST00000543341	FOXD4L1	Q9NU39	408 aa		9.12	□□□□□ -0.95
GTF2H3-212	ENST00000543341	PCDHB15	Q9Y5E8	787 aa		9.12	□□□□□ -0.95
GTF2H3-212	ENST00000543341	SRCIN1	Q9C0H9	1055 aa		9.12	□□□□□ -0.95
GTF2H3-212	ENST00000543341	AK9	Q5TCS8	1911 aa		9.12	□□□□□ -0.95
GTF2H3-212	ENST00000543341	GRM8	O00222	908 aa		9.11	□□□□□ -0.95
GTF2H3-212	ENST00000543341	MYL6B	P14649	208 aa		9.11	□□□□□ -0.95
GTF2H3-212	ENST00000543341	FKBP5	Q13451	457 aa	Predicted RBP	9.11	□□□□□ -0.95
GTF2H3-212	ENST00000543341	MEIS3	Q99687	375 aa		9.11	□□□□□ -0.95
GTF2H3-212	ENST00000543341	RTCB	Q9Y3I0	505 aa	Known RBP	9.11	□□□□□ -0.95
GTF2H3-212	ENST00000543341	SMC5	Q8IY18	1101 aa		9.11	□□□□□ -0.95
GTF2H3-212	ENST00000543341	FTSJ3	Q8IY81	847 aa	Known RBP	9.11	□□□□□ -0.95
GTF2H3-212	ENST00000543341	CHMP4B	Q9H444	224 aa	Known RBP	9.11	□□□□□ -0.95
GTF2H3-212	ENST00000543341	DDX60L	Q5H9U9	1706 aa	Known RBP	9.11	□□□□□ -0.95
GTF2H3-212	ENST00000543341	NBPF7	P0C2Y1	421 aa	Predicted RBP	9.11	□□□□□ -0.95
GTF2H3-212	ENST00000543341	BAG6	P46379	1132 aa		9.11	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms