RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 CRY2Q49AN0 593 aa12.73□□□□□ -0.37
C2CD3-219ENST00000542930 GLIS2Q9BZE0 524 aaPredicted RBP12.73□□□□□ -0.37
C2CD3-219ENST00000542930 SAGE1Q9NXZ1 904 aa12.73□□□□□ -0.37
C2CD3-219ENST00000542930 FAM177BA6PVY3 158 aa12.72□□□□□ -0.37
C2CD3-219ENST00000542930 GNAT3A8MTJ3 354 aa12.72□□□□□ -0.37
C2CD3-219ENST00000542930 GTF2E1P29083 439 aaPredicted RBP12.72□□□□□ -0.37
C2CD3-219ENST00000542930 PIP4K2AP48426 406 aaPredicted RBP12.72□□□□□ -0.37
C2CD3-219ENST00000542930 NIM1KQ8IY84 436 aa12.72□□□□□ -0.37
C2CD3-219ENST00000542930 ZC3H15Q8WU90 426 aaKnown RBP12.72□□□□□ -0.37
C2CD3-219ENST00000542930 ZIC5Q96T25 663 aa12.72□□□□□ -0.37
C2CD3-219ENST00000542930 ZNF408Q9H9D4 720 aa12.72□□□□□ -0.37
C2CD3-219ENST00000542930 USP16Q9Y5T5 823 aa12.72□□□□□ -0.37
C2CD3-219ENST00000542930 CDC37L1Q7L3B6 337 aa12.71□□□□□ -0.37
C2CD3-219ENST00000542930 HOXA10P31260 410 aaPredicted RBP12.7□□□□□ -0.38
C2CD3-219ENST00000542930 GAS2L2Q8NHY3 880 aa12.7□□□□□ -0.38
C2CD3-219ENST00000542930 VPS33BQ9H267 617 aa12.7□□□□□ -0.38
C2CD3-219ENST00000542930 SIPA1L3O60292 1781 aaPredicted RBP12.69□□□□□ -0.38
C2CD3-219ENST00000542930 BTBD11A6QL63 1104 aa12.69□□□□□ -0.38
C2CD3-219ENST00000542930 PPIP5K2O43314 1243 aa12.69□□□□□ -0.38
C2CD3-219ENST00000542930 KCNQ3O43525 872 aa12.69□□□□□ -0.38
C2CD3-219ENST00000542930 HUNKP57058 714 aa12.69□□□□□ -0.38
C2CD3-219ENST00000542930 CXCL9Q07325 125 aa12.69□□□□□ -0.38
C2CD3-219ENST00000542930 RPGRQ92834 1020 aaKnown RBP12.69□□□□□ -0.38
C2CD3-219ENST00000542930 GCC1Q96CN9 775 aa12.69□□□□□ -0.38
C2CD3-219ENST00000542930 NYXQ9GZU5 481 aa12.69□□□□□ -0.38
C2CD3-219ENST00000542930 KNSTRNQ9Y448 316 aa12.69□□□□□ -0.38
C2CD3-219ENST00000542930 CEMIPQ8WUJ3 1361 aa12.69□□□□□ -0.38
C2CD3-219ENST00000542930 NPC1L1Q9UHC9 1359 aa12.69□□□□□ -0.38
C2CD3-219ENST00000542930 KIF7Q2M1P5 1343 aa12.68□□□□□ -0.38
C2CD3-219ENST00000542930 CDHR2Q9BYE9 1310 aa12.68□□□□□ -0.38
C2CD3-219ENST00000542930 DIAPH1O60610 1272 aaKnown RBP12.68□□□□□ -0.38
C2CD3-219ENST00000542930 GMPSP49915 693 aaPredicted RBP12.68□□□□□ -0.38
C2CD3-219ENST00000542930 HIRAP54198 1017 aaPredicted RBP12.68□□□□□ -0.38
C2CD3-219ENST00000542930 HLFQ16534 295 aa12.68□□□□□ -0.38
C2CD3-219ENST00000542930 CTU1Q7Z7A3 348 aaKnown RBP12.68□□□□□ -0.38
C2CD3-219ENST00000542930 ZNRF3Q9ULT6 936 aa12.68□□□□□ -0.38
C2CD3-219ENST00000542930 ABCC12Q96J65 1359 aa12.68□□□□□ -0.38
C2CD3-219ENST00000542930 PRAMEF22A3QJZ6 481 aa12.67□□□□□ -0.38
C2CD3-219ENST00000542930 FAM155AB1AL88 458 aaPredicted RBP12.67□□□□□ -0.38
C2CD3-219ENST00000542930 PPEF1O14829 653 aaPredicted RBP12.67□□□□□ -0.38
C2CD3-219ENST00000542930 SNRPA1P09661 255 aaKnown RBP12.67□□□□□ -0.38
C2CD3-219ENST00000542930 AOC3Q16853 763 aa12.67□□□□□ -0.38
C2CD3-219ENST00000542930 RGMBQ6NW40 437 aa12.67□□□□□ -0.38
C2CD3-219ENST00000542930 NUTM1Q86Y26 1132 aa12.67□□□□□ -0.38
C2CD3-219ENST00000542930 NBPF15Q8N660 670 aa12.67□□□□□ -0.38
C2CD3-219ENST00000542930 CCDC102AQ96A19 550 aa12.67□□□□□ -0.38
C2CD3-219ENST00000542930 CRAMP1Q96RY5 1269 aa12.67□□□□□ -0.38
C2CD3-219ENST00000542930 RNF186Q9NXI6 227 aa12.67□□□□□ -0.38
C2CD3-219ENST00000542930 RIC1Q4ADV7 1423 aa12.66□□□□□ -0.38
C2CD3-219ENST00000542930 NBPF26B4DH59 902 aa12.66□□□□□ -0.38
C2CD3-219ENST00000542930 TRPA1O75762 1119 aa12.66□□□□□ -0.38
C2CD3-219ENST00000542930 KIF23Q02241 960 aaPredicted RBP12.66□□□□□ -0.38
C2CD3-219ENST00000542930 NBPF10Q6P3W6 841 aaKnown RBP12.66□□□□□ -0.38
C2CD3-219ENST00000542930 RBM17Q96I25 401 aaKnown RBP12.66□□□□□ -0.38
C2CD3-219ENST00000542930 TMX4Q9H1E5 349 aaPredicted RBP12.66□□□□□ -0.38
C2CD3-219ENST00000542930 TCERG1O14776 1098 aaKnown RBP12.65□□□□□ -0.38
C2CD3-219ENST00000542930 AMER1Q5JTC6 1135 aaPredicted RBP12.65□□□□□ -0.38
C2CD3-219ENST00000542930 USP48Q86UV5 1035 aa12.65□□□□□ -0.38
C2CD3-219ENST00000542930 SLC51AQ86UW1 340 aa12.65□□□□□ -0.38
C2CD3-219ENST00000542930 TRPM4Q8TD43 1214 aa12.65□□□□□ -0.38
C2CD3-219ENST00000542930 BCL2L13Q9BXK5 485 aa12.65□□□□□ -0.38
C2CD3-219ENST00000542930 HPS5Q9UPZ3 1129 aa12.65□□□□□ -0.38
C2CD3-219ENST00000542930 MKI67P46013 3256 aaKnown RBP12.64□□□□□ -0.39
C2CD3-219ENST00000542930 TNIP1Q15025 636 aa12.64□□□□□ -0.39
C2CD3-219ENST00000542930 PKN2Q16513 984 aaKnown RBP12.64□□□□□ -0.39
C2CD3-219ENST00000542930 C2orf69Q8N8R5 385 aa12.64□□□□□ -0.39
C2CD3-219ENST00000542930 SUPT20HQ8NEM7 779 aa12.64□□□□□ -0.39
C2CD3-219ENST00000542930 RTFDC1Q9BY42 306 aaPredicted RBP12.64□□□□□ -0.39
C2CD3-219ENST00000542930 ERVV-1B6SEH8 477 aa12.63□□□□□ -0.39
C2CD3-219ENST00000542930 ZNF157P51786 506 aaPredicted RBP12.63□□□□□ -0.39
C2CD3-219ENST00000542930 GBA2Q9HCG7 927 aaPredicted RBP12.63□□□□□ -0.39
C2CD3-219ENST00000542930 CNOT7Q9UIV1 285 aaKnown RBP12.63□□□□□ -0.39
C2CD3-219ENST00000542930 TIMELESSQ9UNS1 1208 aa12.63□□□□□ -0.39
C2CD3-219ENST00000542930 ATP6V0A2Q9Y487 856 aa12.63□□□□□ -0.39
C2CD3-219ENST00000542930 IBTKQ9P2D0 1353 aaPredicted RBP12.63□□□□□ -0.39
C2CD3-219ENST00000542930 H7C1D1 291 aa12.62□□□□□ -0.39
C2CD3-219ENST00000542930 RAD17O75943 681 aa12.62□□□□□ -0.39
C2CD3-219ENST00000542930 HABP4Q5JVS0 413 aaKnown RBP12.62□□□□□ -0.39
C2CD3-219ENST00000542930 REM2Q8IYK8 340 aaPredicted RBP12.62□□□□□ -0.39
C2CD3-219ENST00000542930 CSRNP1Q96S65 589 aa12.62□□□□□ -0.39
C2CD3-219ENST00000542930 U2SURPO15042 1029 aaKnown RBP12.61□□□□□ -0.39
C2CD3-219ENST00000542930 SLC10A3P09131 477 aa12.61□□□□□ -0.39
C2CD3-219ENST00000542930 EIF4G2P78344 907 aaKnown RBP eCLIP12.61□□□□□ -0.39
C2CD3-219ENST00000542930 KIAA2012Q0VF49 1180 aa12.61□□□□□ -0.39
C2CD3-219ENST00000542930 DLK2Q6UY11 383 aa12.61□□□□□ -0.39
C2CD3-219ENST00000542930 KRT26Q7Z3Y9 468 aa12.61□□□□□ -0.39
C2CD3-219ENST00000542930 AKAP11Q9UKA4 1901 aa12.6□□□□□ -0.39
C2CD3-219ENST00000542930 DPP8Q6V1X1 898 aaPredicted RBP12.6□□□□□ -0.39
C2CD3-219ENST00000542930 MICALL2Q8IY33 904 aa12.6□□□□□ -0.39
C2CD3-219ENST00000542930 MAP3K15Q6ZN16 1313 aa12.6□□□□□ -0.39
C2CD3-219ENST00000542930 UBN2Q6ZU65 1347 aa12.6□□□□□ -0.39
C2CD3-219ENST00000542930 SHTN1A0MZ66 631 aa12.59□□□□□ -0.39
C2CD3-219ENST00000542930 HSPA5P11021 654 aaKnown RBP12.59□□□□□ -0.39
C2CD3-219ENST00000542930 SUSD4Q5VX71 490 aa12.59□□□□□ -0.39
C2CD3-219ENST00000542930 C3orf67Q6ZVT6 689 aa12.59□□□□□ -0.39
C2CD3-219ENST00000542930 DPF2Q92785 391 aa12.59□□□□□ -0.39
C2CD3-219ENST00000542930 PHACTR3Q96KR7 559 aa12.59□□□□□ -0.39
C2CD3-219ENST00000542930 NLRP3Q96P20 1036 aa12.59□□□□□ -0.39
C2CD3-219ENST00000542930 BBOX1O75936 387 aa12.58□□□□□ -0.4
C2CD3-219ENST00000542930 NTSR2O95665 410 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms