RNA–Protein interactions for RNA: ENST00000542820.5

ZNF664-212, Transcript of zinc finger protein 664, humanhuman

TSL 1 (best)

Gene ZNF664, Length 802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF664-212ENST00000542820 VAMP4O75379 141 aa28.38■■■□□ 2.13
ZNF664-212ENST00000542820 ARHGAP27Q6ZUM4 889 aa28.38■■■□□ 2.13
ZNF664-212ENST00000542820 RNF123Q5XPI4 1314 aa28.38■■■□□ 2.13
ZNF664-212ENST00000542820 TRIM28Q13263 835 aaKnown RBP28.37■■■□□ 2.13
ZNF664-212ENST00000542820 CNKSR1Q969H4 720 aa28.37■■■□□ 2.13
ZNF664-212ENST00000542820 ZNF622Q969S3 477 aaKnown RBP eCLIP28.37■■■□□ 2.13
ZNF664-212ENST00000542820 NPR1P16066 1061 aa28.36■■■□□ 2.13
ZNF664-212ENST00000542820 EXOSC9Q06265 439 aaKnown RBP28.36■■■□□ 2.13
ZNF664-212ENST00000542820 GOLGA2Q08379 1002 aa28.36■■■□□ 2.13
ZNF664-212ENST00000542820 UTP14AQ9BVJ6 771 aaKnown RBP28.36■■■□□ 2.13
ZNF664-212ENST00000542820 LAMB2P55268 1798 aa28.36■■■□□ 2.13
ZNF664-212ENST00000542820 CCDC88AQ3V6T2 1871 aa28.34■■■□□ 2.13
ZNF664-212ENST00000542820 GTF2E1P29083 439 aaPredicted RBP28.34■■■□□ 2.13
ZNF664-212ENST00000542820 MIER1Q8N108 512 aa28.34■■■□□ 2.13
ZNF664-212ENST00000542820 C7orf43Q8WVR3 580 aa28.34■■■□□ 2.13
ZNF664-212ENST00000542820 MYH16Q9H6N6 1097 aa28.34■■■□□ 2.13
ZNF664-212ENST00000542820 DDX60Q8IY21 1712 aaKnown RBP28.32■■■□□ 2.12
ZNF664-212ENST00000542820 HOXA10P31260 410 aaPredicted RBP28.32■■■□□ 2.12
ZNF664-212ENST00000542820 PRPF40BQ6NWY9 871 aaKnown RBP28.32■■■□□ 2.12
ZNF664-212ENST00000542820 C3orf67Q6ZVT6 689 aa28.31■■■□□ 2.12
ZNF664-212ENST00000542820 PRELPP51888 382 aa28.3■■■□□ 2.12
ZNF664-212ENST00000542820 G2E3Q7L622 706 aa28.3■■■□□ 2.12
ZNF664-212ENST00000542820 SYNE4Q8N205 404 aa28.3■■■□□ 2.12
ZNF664-212ENST00000542820 STK31Q9BXU1 1019 aa28.3■■■□□ 2.12
ZNF664-212ENST00000542820 NFKBIEO00221 500 aa28.29■■■□□ 2.12
ZNF664-212ENST00000542820 RIC3Q7Z5B4 369 aa28.29■■■□□ 2.12
ZNF664-212ENST00000542820 DICER1Q9UPY3 1922 aaKnown RBP28.29■■■□□ 2.12
ZNF664-212ENST00000542820 ATP5J2-PTCD1G3V325 749 aa28.28■■■□□ 2.12
ZNF664-212ENST00000542820 TCERG1O14776 1098 aaKnown RBP28.28■■■□□ 2.12
ZNF664-212ENST00000542820 C21orf2O43822 256 aa28.28■■■□□ 2.12
ZNF664-212ENST00000542820 SLC4A2P04920 1241 aa28.28■■■□□ 2.12
ZNF664-212ENST00000542820 METTL22Q9BUU2 404 aaPredicted RBP28.28■■■□□ 2.12
ZNF664-212ENST00000542820 SNED1Q8TER0 1413 aa28.27■■■□□ 2.12
ZNF664-212ENST00000542820 SH3TC1Q8TE82 1336 aa28.27■■■□□ 2.12
ZNF664-212ENST00000542820 ALDH1B1P30837 517 aa28.27■■■□□ 2.12
ZNF664-212ENST00000542820 KSR2Q6VAB6 950 aa28.27■■■□□ 2.12
ZNF664-212ENST00000542820 TRMT112Q9UI30 125 aaKnown RBP28.27■■■□□ 2.12
ZNF664-212ENST00000542820 DDX58O95786 925 aaKnown RBP28.26■■■□□ 2.11
ZNF664-212ENST00000542820 RASSF7Q02833 373 aa28.26■■■□□ 2.11
ZNF664-212ENST00000542820 SLFN5Q08AF3 891 aa28.26■■■□□ 2.11
ZNF664-212ENST00000542820 TRMT2AQ8IZ69 625 aaKnown RBP28.26■■■□□ 2.11
ZNF664-212ENST00000542820 CRAMP1Q96RY5 1269 aa28.26■■■□□ 2.11
ZNF664-212ENST00000542820 LTBP3Q9NS15 1303 aa28.25■■■□□ 2.11
ZNF664-212ENST00000542820 E9PSI1 815 aa28.25■■■□□ 2.11
ZNF664-212ENST00000542820 C9orf131Q5VYM1 1079 aa28.25■■■□□ 2.11
ZNF664-212ENST00000542820 NLRP3Q96P20 1036 aa28.25■■■□□ 2.11
ZNF664-212ENST00000542820 PI4KAP2A4QPH2 592 aa28.24■■■□□ 2.11
ZNF664-212ENST00000542820 PI4KAP1Q8N8J0 262 aa28.24■■■□□ 2.11
ZNF664-212ENST00000542820 MAP3K2Q9Y2U5 619 aa28.24■■■□□ 2.11
ZNF664-212ENST00000542820 FLIIQ13045 1269 aa28.23■■■□□ 2.11
ZNF664-212ENST00000542820 SOGA3Q5TF21 947 aa28.23■■■□□ 2.11
ZNF664-212ENST00000542820 CCDC191Q8NCU4 936 aa28.23■■■□□ 2.11
ZNF664-212ENST00000542820 MYD88Q99836 296 aa28.23■■■□□ 2.11
ZNF664-212ENST00000542820 HCLS1P14317 486 aaPredicted RBP28.22■■■□□ 2.11
ZNF664-212ENST00000542820 IGKV5-2P06315 115 aa28.21■■■□□ 2.11
ZNF664-212ENST00000542820 LMNB1P20700 586 aa28.21■■■□□ 2.11
ZNF664-212ENST00000542820 ZBTB38Q8NAP3 1195 aaPredicted RBP28.21■■■□□ 2.11
ZNF664-212ENST00000542820 FAM89AQ96GI7 184 aa28.21■■■□□ 2.11
ZNF664-212ENST00000542820 TAF1P21675 1872 aa28.21■■■□□ 2.11
ZNF664-212ENST00000542820 RPGRQ92834 1020 aaKnown RBP28.2■■■□□ 2.1
ZNF664-212ENST00000542820 CDCA7LQ96GN5 454 aa28.2■■■□□ 2.1
ZNF664-212ENST00000542820 RBM17Q96I25 401 aaKnown RBP28.2■■■□□ 2.1
ZNF664-212ENST00000542820 RNF181Q9P0P0 153 aa28.2■■■□□ 2.1
ZNF664-212ENST00000542820 ZNF219Q9P2Y4 722 aaPredicted RBP28.2■■■□□ 2.1
ZNF664-212ENST00000542820 ZNF428Q96B54 188 aa28.19■■■□□ 2.1
ZNF664-212ENST00000542820 ZC3H4Q9UPT8 1303 aaKnown RBP28.18■■■□□ 2.1
ZNF664-212ENST00000542820 TIAM2Q8IVF5 1701 aa28.18■■■□□ 2.1
ZNF664-212ENST00000542820 PCCAP05165 728 aaPredicted RBP28.18■■■□□ 2.1
ZNF664-212ENST00000542820 SF3B3Q15393 1217 aaKnown RBP28.18■■■□□ 2.1
ZNF664-212ENST00000542820 CCDC93Q567U6 631 aa28.18■■■□□ 2.1
ZNF664-212ENST00000542820 OLFM4Q6UX06 510 aa28.18■■■□□ 2.1
ZNF664-212ENST00000542820 CWC25Q9NXE8 425 aaPredicted RBP28.17■■■□□ 2.1
ZNF664-212ENST00000542820 TAOK3Q9H2K8 898 aa28.16■■■□□ 2.1
ZNF664-212ENST00000542820 ABCC4O15439 1325 aa28.16■■■□□ 2.1
ZNF664-212ENST00000542820 IRS4O14654 1257 aaPredicted RBP28.15■■■□□ 2.1
ZNF664-212ENST00000542820 CC2D2BQ6DHV5 1058 aa28.15■■■□□ 2.1
ZNF664-212ENST00000542820 NEURL1BA8MQ27 555 aa28.14■■■□□ 2.1
ZNF664-212ENST00000542820 RTKN2Q8IZC4 609 aa28.14■■■□□ 2.1
ZNF664-212ENST00000542820 CDHR2Q9BYE9 1310 aa28.14■■■□□ 2.09
ZNF664-212ENST00000542820 COL4A1P02462 1669 aa28.13■■■□□ 2.09
ZNF664-212ENST00000542820 FKBP4Q02790 459 aaKnown RBP eCLIP28.13■■■□□ 2.09
ZNF664-212ENST00000542820 FKBP5Q13451 457 aaPredicted RBP28.13■■■□□ 2.09
ZNF664-212ENST00000542820 SLC51AQ86UW1 340 aa28.13■■■□□ 2.09
ZNF664-212ENST00000542820 DNAAF4Q8WXU2 420 aa28.13■■■□□ 2.09
ZNF664-212ENST00000542820 MYH3P11055 1940 aa28.13■■■□□ 2.09
ZNF664-212ENST00000542820 LRRC37AA6NMS7 1700 aa28.12■■■□□ 2.09
ZNF664-212ENST00000542820 PSMD1Q99460 953 aa28.12■■■□□ 2.09
ZNF664-212ENST00000542820 PPEF1O14829 653 aaPredicted RBP28.11■■■□□ 2.09
ZNF664-212ENST00000542820 BBOX1O75936 387 aa28.11■■■□□ 2.09
ZNF664-212ENST00000542820 NEXNQ0ZGT2 675 aa28.11■■■□□ 2.09
ZNF664-212ENST00000542820 CWF19L2Q2TBE0 894 aaKnown RBP28.11■■■□□ 2.09
ZNF664-212ENST00000542820 GRIPAP1Q4V328 841 aa28.11■■■□□ 2.09
ZNF664-212ENST00000542820 RTL5Q5HYW3 569 aaPredicted RBP28.11■■■□□ 2.09
ZNF664-212ENST00000542820 GPBP1L1Q9HC44 474 aaPredicted RBP28.11■■■□□ 2.09
ZNF664-212ENST00000542820 ATP6V0A2Q9Y487 856 aa28.11■■■□□ 2.09
ZNF664-212ENST00000542820 GRAPQ13588 217 aa28.1■■■□□ 2.09
ZNF664-212ENST00000542820 GRAPLQ8TC17 118 aaPredicted RBP28.1■■■□□ 2.09
ZNF664-212ENST00000542820 H7C1W4 665 aa28.09■■■□□ 2.09
ZNF664-212ENST00000542820 DDX46Q7L014 1031 aaKnown RBP28.09■■■□□ 2.09
ZNF664-212ENST00000542820 MRPL50Q8N5N7 158 aaKnown RBP28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms