RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 TCIRG1Q13488 830 aa21.11■□□□□ 0.97
TMEM50B-210ENST00000542230 ERC1Q8IUD2 1116 aa21.11■□□□□ 0.97
TMEM50B-210ENST00000542230 ISCA1Q9BUE6 129 aa21.11■□□□□ 0.97
TMEM50B-210ENST00000542230 TJP1Q07157 1748 aa21.11■□□□□ 0.97
TMEM50B-210ENST00000542230 PTF1AQ7RTS3 328 aa21.1■□□□□ 0.97
TMEM50B-210ENST00000542230 CCDC191Q8NCU4 936 aa21.1■□□□□ 0.97
TMEM50B-210ENST00000542230 COPRSQ9NQ92 184 aa21.1■□□□□ 0.97
TMEM50B-210ENST00000542230 LRP6O75581 1613 aa21.1■□□□□ 0.97
TMEM50B-210ENST00000542230 TFCP2Q12800 502 aa21.1■□□□□ 0.97
TMEM50B-210ENST00000542230 BARGINQ6ZT62 677 aa21.1■□□□□ 0.97
TMEM50B-210ENST00000542230 FAM89AQ96GI7 184 aa21.1■□□□□ 0.97
TMEM50B-210ENST00000542230 ZNF594Q96JF6 807 aaPredicted RBP21.1■□□□□ 0.97
TMEM50B-210ENST00000542230 CCDC85AQ96PX6 553 aaPredicted RBP21.1■□□□□ 0.97
TMEM50B-210ENST00000542230 TBC1D2BQ9UPU7 963 aa21.1■□□□□ 0.97
TMEM50B-210ENST00000542230 EP400Q96L91 3159 aa21.09■□□□□ 0.97
TMEM50B-210ENST00000542230 USP42Q9H9J4 1324 aaKnown RBP21.09■□□□□ 0.97
TMEM50B-210ENST00000542230 ECHDC1Q9NTX5 307 aa21.09■□□□□ 0.97
TMEM50B-210ENST00000542230 KIF6Q6ZMV9 814 aa21.08■□□□□ 0.97
TMEM50B-210ENST00000542230 KCNQ4P56696 695 aa21.08■□□□□ 0.96
TMEM50B-210ENST00000542230 FAM182BQ5T319 152 aa21.08■□□□□ 0.96
TMEM50B-210ENST00000542230 HSCBQ8IWL3 235 aa21.08■□□□□ 0.96
TMEM50B-210ENST00000542230 JCADQ9P266 1359 aa21.07■□□□□ 0.96
TMEM50B-210ENST00000542230 MAP3K15Q6ZN16 1313 aa21.07■□□□□ 0.96
TMEM50B-210ENST00000542230 ITPK1Q13572 414 aa21.07■□□□□ 0.96
TMEM50B-210ENST00000542230 NFKBIBQ15653 356 aa21.07■□□□□ 0.96
TMEM50B-210ENST00000542230 COL15A1P39059 1388 aa21.07■□□□□ 0.96
TMEM50B-210ENST00000542230 TTC41PQ6P2S7 1318 aa21.07■□□□□ 0.96
TMEM50B-210ENST00000542230 NWD2Q9ULI1 1742 aa21.07■□□□□ 0.96
TMEM50B-210ENST00000542230 REC8O95072 547 aa21.07■□□□□ 0.96
TMEM50B-210ENST00000542230 ANO2Q9NQ90 1003 aa21.07■□□□□ 0.96
TMEM50B-210ENST00000542230 GLRX3O76003 335 aaKnown RBP21.06■□□□□ 0.96
TMEM50B-210ENST00000542230 ATP6V1AP38606 617 aa21.06■□□□□ 0.96
TMEM50B-210ENST00000542230 PALD1Q9ULE6 856 aa21.06■□□□□ 0.96
TMEM50B-210ENST00000542230 SNX21Q969T3 373 aa21.05■□□□□ 0.96
TMEM50B-210ENST00000542230 FOXD4L1Q9NU39 408 aa21.05■□□□□ 0.96
TMEM50B-210ENST00000542230 NDUFB9Q9Y6M9 179 aa21.05■□□□□ 0.96
TMEM50B-210ENST00000542230 MYT1Q01538 1121 aa21.05■□□□□ 0.96
TMEM50B-210ENST00000542230 INTS5Q6P9B9 1019 aaKnown RBP21.05■□□□□ 0.96
TMEM50B-210ENST00000542230 GIGYF2Q6Y7W6 1299 aaKnown RBP21.05■□□□□ 0.96
TMEM50B-210ENST00000542230 BOLA2Q9H3K6 86 aa21.05■□□□□ 0.96
TMEM50B-210ENST00000542230 LOC102724428A0A0B4J2F2 783 aa21.04■□□□□ 0.96
TMEM50B-210ENST00000542230 SIK1P57059 783 aa21.04■□□□□ 0.96
TMEM50B-210ENST00000542230 LRRC24Q50LG9 513 aa21.04■□□□□ 0.96
TMEM50B-210ENST00000542230 ATG9AQ7Z3C6 839 aa21.04■□□□□ 0.96
TMEM50B-210ENST00000542230 EDC3Q96F86 508 aaKnown RBP21.04■□□□□ 0.96
TMEM50B-210ENST00000542230 PUS3Q9BZE2 481 aaKnown RBP21.04■□□□□ 0.96
TMEM50B-210ENST00000542230 DBNLQ9UJU6 430 aaKnown RBP21.04■□□□□ 0.96
TMEM50B-210ENST00000542230 FRAT2O75474 233 aaPredicted RBP21.04■□□□□ 0.96
TMEM50B-210ENST00000542230 VPS72Q15906 364 aa21.04■□□□□ 0.96
TMEM50B-210ENST00000542230 CWC27Q6UX04 472 aaKnown RBP21.04■□□□□ 0.96
TMEM50B-210ENST00000542230 CNTROBQ8N137 903 aa21.03■□□□□ 0.96
TMEM50B-210ENST00000542230 AK9Q5TCS8 1911 aa21.03■□□□□ 0.96
TMEM50B-210ENST00000542230 TNNI3KQ59H18 835 aa21.03■□□□□ 0.96
TMEM50B-210ENST00000542230 FNBP4Q8N3X1 1017 aaPredicted RBP21.03■□□□□ 0.96
TMEM50B-210ENST00000542230 FPGT-TNNI3KV9GXZ4 949 aa21.03■□□□□ 0.96
TMEM50B-210ENST00000542230 CRKLP46109 303 aaKnown RBP21.02■□□□□ 0.96
TMEM50B-210ENST00000542230 TRIM28Q13263 835 aaKnown RBP21.02■□□□□ 0.96
TMEM50B-210ENST00000542230 NLRP10Q86W26 655 aa21.02■□□□□ 0.96
TMEM50B-210ENST00000542230 DZIP3Q86Y13 1208 aaKnown RBP21.02■□□□□ 0.96
TMEM50B-210ENST00000542230 USP21Q9UK80 565 aa21.02■□□□□ 0.96
TMEM50B-210ENST00000542230 SMIM5Q71RC9 77 aa21.02■□□□□ 0.96
TMEM50B-210ENST00000542230 DBNDD2Q9BQY9 259 aa21.02■□□□□ 0.96
TMEM50B-210ENST00000542230 PALLDQ8WX93 1383 aa21.01■□□□□ 0.95
TMEM50B-210ENST00000542230 HSPA1LP34931 641 aa21.01■□□□□ 0.95
TMEM50B-210ENST00000542230 CERKQ8TCT0 537 aa21.01■□□□□ 0.95
TMEM50B-210ENST00000542230 SGSM2O43147 1006 aa21■□□□□ 0.95
TMEM50B-210ENST00000542230 IL6STP40189 918 aaPredicted RBP21■□□□□ 0.95
TMEM50B-210ENST00000542230 GPATCH3Q96I76 525 aa21■□□□□ 0.95
TMEM50B-210ENST00000542230 UBN2Q6ZU65 1347 aa21■□□□□ 0.95
TMEM50B-210ENST00000542230 MYH14Q7Z406 1995 aaKnown RBP21■□□□□ 0.95
TMEM50B-210ENST00000542230 CHGBP05060 677 aa21■□□□□ 0.95
TMEM50B-210ENST00000542230 PCCAP05165 728 aaPredicted RBP21■□□□□ 0.95
TMEM50B-210ENST00000542230 EIF5P55010 431 aaKnown RBP21■□□□□ 0.95
TMEM50B-210ENST00000542230 TIMM10P62072 90 aa21■□□□□ 0.95
TMEM50B-210ENST00000542230 ZBTB38Q8NAP3 1195 aaPredicted RBP21■□□□□ 0.95
TMEM50B-210ENST00000542230 RABEP1Q15276 862 aa20.99■□□□□ 0.95
TMEM50B-210ENST00000542230 CCDC87Q9NVE4 849 aa20.99■□□□□ 0.95
TMEM50B-210ENST00000542230 FAM177BA6PVY3 158 aa20.99■□□□□ 0.95
TMEM50B-210ENST00000542230 K7ELQ4 463 aaPredicted RBP20.98■□□□□ 0.95
TMEM50B-210ENST00000542230 FAM227BQ96M60 508 aa20.97■□□□□ 0.95
TMEM50B-210ENST00000542230 NEUROD6Q96NK8 337 aa20.96■□□□□ 0.95
TMEM50B-210ENST00000542230 LSG1Q9H089 658 aaKnown RBP20.96■□□□□ 0.95
TMEM50B-210ENST00000542230 TRMT112Q9UI30 125 aaKnown RBP20.96■□□□□ 0.95
TMEM50B-210ENST00000542230 EYA2O00167 538 aa20.96■□□□□ 0.95
TMEM50B-210ENST00000542230 EVI5LQ96CN4 794 aa20.96■□□□□ 0.95
TMEM50B-210ENST00000542230 DIAPH3Q9NSV4 1193 aa20.96■□□□□ 0.95
TMEM50B-210ENST00000542230 NUP98P52948 1817 aa20.96■□□□□ 0.95
TMEM50B-210ENST00000542230 EIF5BO60841 1220 aaKnown RBP20.95■□□□□ 0.94
TMEM50B-210ENST00000542230 PTH1RQ03431 593 aa20.95■□□□□ 0.94
TMEM50B-210ENST00000542230 DDIT3P35638 169 aa20.95■□□□□ 0.94
TMEM50B-210ENST00000542230 GREM2Q9H772 168 aa20.95■□□□□ 0.94
TMEM50B-210ENST00000542230 CSF1RP07333 972 aa20.94■□□□□ 0.94
TMEM50B-210ENST00000542230 CCDC57Q2TAC2 916 aa20.94■□□□□ 0.94
TMEM50B-210ENST00000542230 LINC00116Q8NCU8 138 aa20.94■□□□□ 0.94
TMEM50B-210ENST00000542230 NMIQ13287 307 aaPredicted RBP20.94■□□□□ 0.94
TMEM50B-210ENST00000542230 ZNF34Q8IZ26 560 aa20.94■□□□□ 0.94
TMEM50B-210ENST00000542230 TTLL11Q8NHH1 800 aa20.94■□□□□ 0.94
TMEM50B-210ENST00000542230 SPATA31A6Q5VVP1 1343 aa20.93■□□□□ 0.94
TMEM50B-210ENST00000542230 ERVV-1B6SEH8 477 aa20.93■□□□□ 0.94
TMEM50B-210ENST00000542230 IRS4O14654 1257 aaPredicted RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms