RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-215	ENST00000542133	C7orf43	Q8WVR3	580 aa		10.53	□□□□□ -0.72
NPIPB4-215	ENST00000542133	MAP2K2	P36507	400 aa		10.52	□□□□□ -0.73
NPIPB4-215	ENST00000542133	SOX10	P56693	466 aa		10.52	□□□□□ -0.73
NPIPB4-215	ENST00000542133	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.52	□□□□□ -0.73
NPIPB4-215	ENST00000542133	AEBP1	Q8IUX7	1158 aa		10.52	□□□□□ -0.73
NPIPB4-215	ENST00000542133	TSPYL2	Q9H2G4	693 aa	Predicted RBP	10.52	□□□□□ -0.73
NPIPB4-215	ENST00000542133	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.52	□□□□□ -0.73
NPIPB4-215	ENST00000542133	TLL2	Q9Y6L7	1015 aa		10.52	□□□□□ -0.73
NPIPB4-215	ENST00000542133	FZD9	O00144	591 aa		10.51	□□□□□ -0.73
NPIPB4-215	ENST00000542133	CANX	P27824	592 aa	Known RBP	10.51	□□□□□ -0.73
NPIPB4-215	ENST00000542133	EIF5	P55010	431 aa	Known RBP	10.51	□□□□□ -0.73
NPIPB4-215	ENST00000542133	GPC2	Q8N158	579 aa		10.51	□□□□□ -0.73
NPIPB4-215	ENST00000542133	CNBD1	Q8NA66	436 aa		10.51	□□□□□ -0.73
NPIPB4-215	ENST00000542133	MASTL	Q96GX5	879 aa		10.51	□□□□□ -0.73
NPIPB4-215	ENST00000542133	SLC52A2	Q9HAB3	445 aa		10.51	□□□□□ -0.73
NPIPB4-215	ENST00000542133	COL4A5	P29400	1685 aa		10.5	□□□□□ -0.73
NPIPB4-215	ENST00000542133		A0A087WZG4	1122 aa		10.5	□□□□□ -0.73
NPIPB4-215	ENST00000542133	TRAF5	O00463	557 aa		10.5	□□□□□ -0.73
NPIPB4-215	ENST00000542133	BRPF1	P55201	1214 aa	Predicted RBP	10.5	□□□□□ -0.73
NPIPB4-215	ENST00000542133	SLC39A6	Q13433	755 aa		10.5	□□□□□ -0.73
NPIPB4-215	ENST00000542133	CST9	Q5W186	159 aa		10.5	□□□□□ -0.73
NPIPB4-215	ENST00000542133	PLCD3	Q8N3E9	789 aa		10.5	□□□□□ -0.73
NPIPB4-215	ENST00000542133	PKNOX2	Q96KN3	472 aa		10.5	□□□□□ -0.73
NPIPB4-215	ENST00000542133	SNED1	Q8TER0	1413 aa		10.5	□□□□□ -0.73
NPIPB4-215	ENST00000542133	ST5	P78524	1137 aa		10.49	□□□□□ -0.73
NPIPB4-215	ENST00000542133	CDCA8	Q53HL2	280 aa		10.49	□□□□□ -0.73
NPIPB4-215	ENST00000542133	OLFM4	Q6UX06	510 aa		10.49	□□□□□ -0.73
NPIPB4-215	ENST00000542133	IARS	P41252	1262 aa	Known RBP	10.48	□□□□□ -0.73
NPIPB4-215	ENST00000542133	TNNT2	P45379	298 aa	Predicted RBP	10.48	□□□□□ -0.73
NPIPB4-215	ENST00000542133	SAPCD2	Q86UD0	394 aa		10.48	□□□□□ -0.73
NPIPB4-215	ENST00000542133	NPHP1	O15259	732 aa		10.47	□□□□□ -0.73
NPIPB4-215	ENST00000542133	LMOD1	P29536	600 aa	Predicted RBP	10.47	□□□□□ -0.73
NPIPB4-215	ENST00000542133	SCNN1D	P51172	638 aa		10.47	□□□□□ -0.73
NPIPB4-215	ENST00000542133	AKAP4	Q5JQC9	854 aa		10.47	□□□□□ -0.73
NPIPB4-215	ENST00000542133	CIAPIN1	Q6FI81	312 aa		10.47	□□□□□ -0.73
NPIPB4-215	ENST00000542133	LGR6	Q9HBX8	967 aa		10.47	□□□□□ -0.73
NPIPB4-215	ENST00000542133	TBC1D2B	Q9UPU7	963 aa		10.47	□□□□□ -0.73
NPIPB4-215	ENST00000542133	CAMTA2	O94983	1202 aa		10.46	□□□□□ -0.73
NPIPB4-215	ENST00000542133	STARD3NL	O95772	234 aa		10.46	□□□□□ -0.73
NPIPB4-215	ENST00000542133	NPR1	P16066	1061 aa		10.46	□□□□□ -0.73
NPIPB4-215	ENST00000542133	RTKN2	Q8IZC4	609 aa		10.46	□□□□□ -0.73
NPIPB4-215	ENST00000542133	HHIPL1	Q96JK4	782 aa		10.46	□□□□□ -0.73
NPIPB4-215	ENST00000542133	SETDB2	Q96T68	719 aa		10.46	□□□□□ -0.73
NPIPB4-215	ENST00000542133	GJA3	Q9Y6H8	435 aa		10.46	□□□□□ -0.73
NPIPB4-215	ENST00000542133	RNMT	O43148	476 aa	Known RBP	10.45	□□□□□ -0.74
NPIPB4-215	ENST00000542133	EPS15	P42566	896 aa		10.45	□□□□□ -0.74
NPIPB4-215	ENST00000542133	SULT6B1	Q6IMI4	303 aa		10.45	□□□□□ -0.74
NPIPB4-215	ENST00000542133	USP50	Q70EL3	339 aa	Predicted RBP	10.45	□□□□□ -0.74
NPIPB4-215	ENST00000542133	SYNE4	Q8N205	404 aa		10.45	□□□□□ -0.74
NPIPB4-215	ENST00000542133	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.45	□□□□□ -0.74
NPIPB4-215	ENST00000542133	KLRG2	A4D1S0	409 aa	Predicted RBP	10.44	□□□□□ -0.74
NPIPB4-215	ENST00000542133	CELF2	O95319	508 aa	Known RBP	10.44	□□□□□ -0.74
NPIPB4-215	ENST00000542133	IL6ST	P40189	918 aa	Predicted RBP	10.44	□□□□□ -0.74
NPIPB4-215	ENST00000542133	EIF6	P56537	245 aa	Known RBP	10.44	□□□□□ -0.74
NPIPB4-215	ENST00000542133	JDP2	Q8WYK2	163 aa		10.44	□□□□□ -0.74
NPIPB4-215	ENST00000542133	PSMD1	Q99460	953 aa		10.44	□□□□□ -0.74
NPIPB4-215	ENST00000542133	HEG1	Q9ULI3	1381 aa		10.43	□□□□□ -0.74
NPIPB4-215	ENST00000542133	NOG	Q13253	232 aa		10.43	□□□□□ -0.74
NPIPB4-215	ENST00000542133	ZIC5	Q96T25	663 aa		10.43	□□□□□ -0.74
NPIPB4-215	ENST00000542133	BCCIP	Q9P287	314 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
NPIPB4-215	ENST00000542133	SIPA1L3	O60292	1781 aa	Predicted RBP	10.42	□□□□□ -0.74
NPIPB4-215	ENST00000542133	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.42	□□□□□ -0.74
NPIPB4-215	ENST00000542133	TTC5	Q8N0Z6	440 aa		10.42	□□□□□ -0.74
NPIPB4-215	ENST00000542133	GCC1	Q96CN9	775 aa		10.42	□□□□□ -0.74
NPIPB4-215	ENST00000542133	GLIS2	Q9BZE0	524 aa	Predicted RBP	10.42	□□□□□ -0.74
NPIPB4-215	ENST00000542133	IGSF3	O75054	1194 aa		10.41	□□□□□ -0.74
NPIPB4-215	ENST00000542133	DHX37	Q8IY37	1157 aa	Known RBP	10.41	□□□□□ -0.74
NPIPB4-215	ENST00000542133	MS4A3	Q96HJ5	214 aa		10.41	□□□□□ -0.74
NPIPB4-215	ENST00000542133	ZNF496	Q96IT1	587 aa	Predicted RBP	10.41	□□□□□ -0.74
NPIPB4-215	ENST00000542133	ADARB2	Q9NS39	739 aa	Known RBP	10.41	□□□□□ -0.74
NPIPB4-215	ENST00000542133	SAGE1	Q9NXZ1	904 aa		10.41	□□□□□ -0.74
NPIPB4-215	ENST00000542133	IL13	P35225	146 aa		10.4	□□□□□ -0.74
NPIPB4-215	ENST00000542133	NBR1	Q14596	966 aa		10.4	□□□□□ -0.74
NPIPB4-215	ENST00000542133	DZIP3	Q86Y13	1208 aa	Known RBP	10.4	□□□□□ -0.74
NPIPB4-215	ENST00000542133	ZNF408	Q9H9D4	720 aa		10.4	□□□□□ -0.74
NPIPB4-215	ENST00000542133	GPRC5D	Q9NZD1	345 aa		10.4	□□□□□ -0.74
NPIPB4-215	ENST00000542133	A1BG	P04217	495 aa		10.39	□□□□□ -0.75
NPIPB4-215	ENST00000542133	ALDH1B1	P30837	517 aa		10.39	□□□□□ -0.75
NPIPB4-215	ENST00000542133	HABP4	Q5JVS0	413 aa	Known RBP	10.39	□□□□□ -0.75
NPIPB4-215	ENST00000542133	LARGE2	Q8N3Y3	721 aa		10.39	□□□□□ -0.75
NPIPB4-215	ENST00000542133	NBPF15	Q8N660	670 aa		10.39	□□□□□ -0.75
NPIPB4-215	ENST00000542133	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.39	□□□□□ -0.75
NPIPB4-215	ENST00000542133	FAM155A	B1AL88	458 aa	Predicted RBP	10.38	□□□□□ -0.75
NPIPB4-215	ENST00000542133	CENPB	P07199	599 aa	Predicted RBP	10.38	□□□□□ -0.75
NPIPB4-215	ENST00000542133	HUNK	P57058	714 aa		10.38	□□□□□ -0.75
NPIPB4-215	ENST00000542133	MTHFSD	Q2M296	383 aa	Known RBP	10.38	□□□□□ -0.75
NPIPB4-215	ENST00000542133	CC2D2B	Q6DHV5	1058 aa		10.38	□□□□□ -0.75
NPIPB4-215	ENST00000542133	ZNF790	Q6PG37	636 aa		10.38	□□□□□ -0.75
NPIPB4-215	ENST00000542133	CLEC4G	Q6UXB4	293 aa		10.38	□□□□□ -0.75
NPIPB4-215	ENST00000542133	CTU1	Q7Z7A3	348 aa	Known RBP	10.38	□□□□□ -0.75
NPIPB4-215	ENST00000542133	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.38	□□□□□ -0.75
NPIPB4-215	ENST00000542133	PGAP2	Q9UHJ9	254 aa		10.38	□□□□□ -0.75
NPIPB4-215	ENST00000542133	HPS5	Q9UPZ3	1129 aa		10.38	□□□□□ -0.75
NPIPB4-215	ENST00000542133	RIC1	Q4ADV7	1423 aa		10.38	□□□□□ -0.75
NPIPB4-215	ENST00000542133	ABCC12	Q96J65	1359 aa		10.38	□□□□□ -0.75
NPIPB4-215	ENST00000542133	CRY2	Q49AN0	593 aa		10.37	□□□□□ -0.75
NPIPB4-215	ENST00000542133	TPTE2	Q6XPS3	522 aa		10.37	□□□□□ -0.75
NPIPB4-215	ENST00000542133	SLC51A	Q86UW1	340 aa		10.37	□□□□□ -0.75
NPIPB4-215	ENST00000542133	NIM1K	Q8IY84	436 aa		10.37	□□□□□ -0.75
NPIPB4-215	ENST00000542133	ZNF652	Q9Y2D9	606 aa		10.37	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms