RNA–Protein interactions for RNA: ENST00000541897.5

MSRB3-211, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-211ENST00000541897 RNF123Q5XPI4 1314 aa26.61■■□□□ 1.85
MSRB3-211ENST00000541897 UBN2Q6ZU65 1347 aa26.61■■□□□ 1.85
MSRB3-211ENST00000541897 POLRMTO00411 1230 aaKnown RBP26.6■■□□□ 1.85
MSRB3-211ENST00000541897 ALDH1L1O75891 902 aa26.6■■□□□ 1.85
MSRB3-211ENST00000541897 CCT4P50991 539 aaKnown RBP26.6■■□□□ 1.85
MSRB3-211ENST00000541897 N4BP2Q86UW6 1770 aaPredicted RBP26.59■■□□□ 1.85
MSRB3-211ENST00000541897 NEURL1BA8MQ27 555 aa26.59■■□□□ 1.85
MSRB3-211ENST00000541897 MMP10P09238 476 aa26.59■■□□□ 1.85
MSRB3-211ENST00000541897 GPTP24298 496 aa26.59■■□□□ 1.85
MSRB3-211ENST00000541897 INTS3Q68E01 1043 aaKnown RBP26.59■■□□□ 1.85
MSRB3-211ENST00000541897 SLC4A10Q6U841 1118 aa26.59■■□□□ 1.85
MSRB3-211ENST00000541897 PPP1R42Q7Z4L9 355 aa26.59■■□□□ 1.85
MSRB3-211ENST00000541897 SRCIN1Q9C0H9 1055 aa26.59■■□□□ 1.85
MSRB3-211ENST00000541897 ATP5J2-PTCD1G3V325 749 aa26.58■■□□□ 1.85
MSRB3-211ENST00000541897 RRP1P56182 461 aaKnown RBP26.58■■□□□ 1.85
MSRB3-211ENST00000541897 DDR1Q08345 913 aa26.58■■□□□ 1.85
MSRB3-211ENST00000541897 DZIP1LQ8IYY4 767 aaKnown RBP26.58■■□□□ 1.85
MSRB3-211ENST00000541897 NYXQ9GZU5 481 aa26.58■■□□□ 1.85
MSRB3-211ENST00000541897 CWC25Q9NXE8 425 aaPredicted RBP26.58■■□□□ 1.85
MSRB3-211ENST00000541897 PARP3Q9Y6F1 533 aa26.58■■□□□ 1.85
MSRB3-211ENST00000541897 NRXN2Q9P2S2 1712 aa26.57■■□□□ 1.84
MSRB3-211ENST00000541897 PDE3AQ14432 1141 aa26.57■■□□□ 1.84
MSRB3-211ENST00000541897 BICDL1Q6ZP65 573 aa26.57■■□□□ 1.84
MSRB3-211ENST00000541897 SERPINB2P05120 415 aa26.56■■□□□ 1.84
MSRB3-211ENST00000541897 CWF19L2Q2TBE0 894 aaKnown RBP26.56■■□□□ 1.84
MSRB3-211ENST00000541897 FTSJ3Q8IY81 847 aaKnown RBP26.56■■□□□ 1.84
MSRB3-211ENST00000541897 NTSR2O95665 410 aa26.55■■□□□ 1.84
MSRB3-211ENST00000541897 GCKRQ14397 625 aa26.55■■□□□ 1.84
MSRB3-211ENST00000541897 SUSD4Q5VX71 490 aa26.55■■□□□ 1.84
MSRB3-211ENST00000541897 TPTE2Q6XPS3 522 aa26.55■■□□□ 1.84
MSRB3-211ENST00000541897 UTP14AQ9BVJ6 771 aaKnown RBP26.55■■□□□ 1.84
MSRB3-211ENST00000541897 NBPF5PQ86XG9 351 aaPredicted RBP26.54■■□□□ 1.84
MSRB3-211ENST00000541897 TNNQ9UQP3 1299 aa26.54■■□□□ 1.84
MSRB3-211ENST00000541897 PLIN1O60240 522 aa26.53■■□□□ 1.84
MSRB3-211ENST00000541897 CLUAP1Q96AJ1 413 aa26.53■■□□□ 1.84
MSRB3-211ENST00000541897 PCCAP05165 728 aaPredicted RBP26.52■■□□□ 1.84
MSRB3-211ENST00000541897 ZBTB38Q8NAP3 1195 aaPredicted RBP26.52■■□□□ 1.84
MSRB3-211ENST00000541897 KIF13BQ9NQT8 1826 aa26.52■■□□□ 1.84
MSRB3-211ENST00000541897 AFDNP55196 1824 aaKnown RBP26.51■■□□□ 1.83
MSRB3-211ENST00000541897 RIC1Q4ADV7 1423 aa26.51■■□□□ 1.83
MSRB3-211ENST00000541897 CNBD1Q8NA66 436 aa26.51■■□□□ 1.83
MSRB3-211ENST00000541897 TRMT112Q9UI30 125 aaKnown RBP26.51■■□□□ 1.83
MSRB3-211ENST00000541897 UTYO14607 1347 aa26.5■■□□□ 1.83
MSRB3-211ENST00000541897 SH3TC1Q8TE82 1336 aa26.5■■□□□ 1.83
MSRB3-211ENST00000541897 H7C1W4 665 aa26.5■■□□□ 1.83
MSRB3-211ENST00000541897 RLBP1P12271 317 aa26.5■■□□□ 1.83
MSRB3-211ENST00000541897 PRR5LQ6MZQ0 368 aa26.5■■□□□ 1.83
MSRB3-211ENST00000541897 TMEM57Q8N5G2 664 aa26.5■■□□□ 1.83
MSRB3-211ENST00000541897 SUPT16HQ9Y5B9 1047 aaKnown RBP26.5■■□□□ 1.83
MSRB3-211ENST00000541897 KIAA1551Q9HCM1 1747 aa26.5■■□□□ 1.83
MSRB3-211ENST00000541897 CDHR2Q9BYE9 1310 aa26.49■■□□□ 1.83
MSRB3-211ENST00000541897 HSP90B1P14625 803 aaKnown RBP26.49■■□□□ 1.83
MSRB3-211ENST00000541897 SLC10A5Q5PT55 438 aa26.49■■□□□ 1.83
MSRB3-211ENST00000541897 GRM8O00222 908 aa26.48■■□□□ 1.83
MSRB3-211ENST00000541897 ST5P78524 1137 aa26.48■■□□□ 1.83
MSRB3-211ENST00000541897 GTF2E1P29083 439 aaPredicted RBP26.47■■□□□ 1.83
MSRB3-211ENST00000541897 CASP7P55210 303 aa26.47■■□□□ 1.83
MSRB3-211ENST00000541897 PANK1Q8TE04 598 aa26.47■■□□□ 1.83
MSRB3-211ENST00000541897 USP44Q9H0E7 712 aa26.47■■□□□ 1.83
MSRB3-211ENST00000541897 FAM177BA6PVY3 158 aa26.46■■□□□ 1.83
MSRB3-211ENST00000541897 FAM89AQ96GI7 184 aa26.46■■□□□ 1.83
MSRB3-211ENST00000541897 C9orf78Q9NZ63 289 aaPredicted RBP26.46■■□□□ 1.83
MSRB3-211ENST00000541897 C10orf71Q711Q0 1435 aa26.46■■□□□ 1.83
MSRB3-211ENST00000541897 NPHP1O15259 732 aa26.45■■□□□ 1.82
MSRB3-211ENST00000541897 MVPQ14764 893 aaKnown RBP26.45■■□□□ 1.82
MSRB3-211ENST00000541897 ERFEQ4G0M1 354 aa26.45■■□□□ 1.82
MSRB3-211ENST00000541897 C20orf194Q5TEA3 1177 aa26.44■■□□□ 1.82
MSRB3-211ENST00000541897 NUTM1Q86Y26 1132 aa26.44■■□□□ 1.82
MSRB3-211ENST00000541897 ITPRIPQ8IWB1 547 aa26.44■■□□□ 1.82
MSRB3-211ENST00000541897 ZNF526Q8TF50 670 aaPredicted RBP26.44■■□□□ 1.82
MSRB3-211ENST00000541897 BRIP1Q9BX63 1249 aa26.44■■□□□ 1.82
MSRB3-211ENST00000541897 PLA2G12BQ9BX93 195 aa26.44■■□□□ 1.82
MSRB3-211ENST00000541897 HDAC5Q9UQL6 1122 aa26.44■■□□□ 1.82
MSRB3-211ENST00000541897 A0A0G2JLW4 131 aa26.43■■□□□ 1.82
MSRB3-211ENST00000541897 GNAI3P08754 354 aa26.43■■□□□ 1.82
MSRB3-211ENST00000541897 UBE3BQ7Z3V4 1068 aa26.43■■□□□ 1.82
MSRB3-211ENST00000541897 CHMP4BQ9H444 224 aaKnown RBP26.43■■□□□ 1.82
MSRB3-211ENST00000541897 DDX19BQ9UMR2 479 aa26.43■■□□□ 1.82
MSRB3-211ENST00000541897 PDZRN3Q9UPQ7 1066 aa26.43■■□□□ 1.82
MSRB3-211ENST00000541897 ABCC12Q96J65 1359 aa26.43■■□□□ 1.82
MSRB3-211ENST00000541897 KLRG2A4D1S0 409 aaPredicted RBP26.42■■□□□ 1.82
MSRB3-211ENST00000541897 IRS4O14654 1257 aaPredicted RBP26.42■■□□□ 1.82
MSRB3-211ENST00000541897 GPBP1L1Q9HC44 474 aaPredicted RBP26.42■■□□□ 1.82
MSRB3-211ENST00000541897 LAMB2P55268 1798 aa26.42■■□□□ 1.82
MSRB3-211ENST00000541897 NBPF7P0C2Y1 421 aaPredicted RBP26.41■■□□□ 1.82
MSRB3-211ENST00000541897 TGFB2P61812 414 aa26.41■■□□□ 1.82
MSRB3-211ENST00000541897 ZBTB7BO15156 539 aaPredicted RBP26.4■■□□□ 1.82
MSRB3-211ENST00000541897 PDE8AO60658 829 aa26.4■■□□□ 1.82
MSRB3-211ENST00000541897 PDE6BP35913 854 aa26.4■■□□□ 1.82
MSRB3-211ENST00000541897 SYNE4Q8N205 404 aa26.4■■□□□ 1.82
MSRB3-211ENST00000541897 COG6Q9Y2V7 657 aa26.4■■□□□ 1.82
MSRB3-211ENST00000541897 BRCA1P38398 1863 aaKnown RBP26.4■■□□□ 1.82
MSRB3-211ENST00000541897 UBTFL1P0CB47 393 aaPredicted RBP26.39■■□□□ 1.82
MSRB3-211ENST00000541897 DPEP1P16444 411 aa26.39■■□□□ 1.82
MSRB3-211ENST00000541897 NLRP3Q96P20 1036 aa26.39■■□□□ 1.82
MSRB3-211ENST00000541897 MEIS3Q99687 375 aa26.39■■□□□ 1.82
MSRB3-211ENST00000541897 BCS1LQ9Y276 419 aa26.39■■□□□ 1.82
MSRB3-211ENST00000541897 DDX60Q8IY21 1712 aaKnown RBP26.39■■□□□ 1.81
MSRB3-211ENST00000541897 RTL5Q5HYW3 569 aaPredicted RBP26.38■■□□□ 1.81
MSRB3-211ENST00000541897 HCLS1P14317 486 aaPredicted RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms