RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 BRINP3Q76B58 766 aa15.96■□□□□ 0.15
PRKAB1-206ENST00000541640 TRIM44Q96DX7 344 aaPredicted RBP15.96■□□□□ 0.15
PRKAB1-206ENST00000541640 FMNL2Q96PY5 1086 aa15.96■□□□□ 0.15
PRKAB1-206ENST00000541640 TMEM63CQ9P1W3 806 aa15.96■□□□□ 0.15
PRKAB1-206ENST00000541640 RBM27Q9P2N5 1060 aaKnown RBP15.96■□□□□ 0.15
PRKAB1-206ENST00000541640 USP16Q9Y5T5 823 aa15.96■□□□□ 0.15
PRKAB1-206ENST00000541640 CASTP20810 708 aaKnown RBP15.96■□□□□ 0.15
PRKAB1-206ENST00000541640 NECTIN1Q15223 517 aa15.96■□□□□ 0.15
PRKAB1-206ENST00000541640 CABLES1Q8TDN4 633 aa15.96■□□□□ 0.15
PRKAB1-206ENST00000541640 ANP32BQ92688 251 aaKnown RBP15.96■□□□□ 0.15
PRKAB1-206ENST00000541640 CCDC8Q9H0W5 538 aaPredicted RBP15.96■□□□□ 0.15
PRKAB1-206ENST00000541640 NSFL1CQ9UNZ2 370 aaKnown RBP15.96■□□□□ 0.15
PRKAB1-206ENST00000541640 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.96■□□□□ 0.15
PRKAB1-206ENST00000541640 SPATA31A3Q5VYP0 1347 aa15.96■□□□□ 0.15
PRKAB1-206ENST00000541640 CCDC171Q6TFL3 1326 aa15.96■□□□□ 0.15
PRKAB1-206ENST00000541640 ESPNB1AK53 854 aa15.95■□□□□ 0.14
PRKAB1-206ENST00000541640 EPHA10Q5JZY3 1008 aa15.95■□□□□ 0.14
PRKAB1-206ENST00000541640 VPS53Q5VIR6 699 aa15.95■□□□□ 0.14
PRKAB1-206ENST00000541640 ZSWIM6Q9HCJ5 1215 aa15.95■□□□□ 0.14
PRKAB1-206ENST00000541640 PRIM1P49642 420 aaKnown RBP15.95■□□□□ 0.14
PRKAB1-206ENST00000541640 CHRNA2Q15822 529 aa15.95■□□□□ 0.14
PRKAB1-206ENST00000541640 LRSAM1Q6UWE0 723 aa15.95■□□□□ 0.14
PRKAB1-206ENST00000541640 COPRSQ9NQ92 184 aa15.95■□□□□ 0.14
PRKAB1-206ENST00000541640 PRPF40BQ6NWY9 871 aaKnown RBP15.94■□□□□ 0.14
PRKAB1-206ENST00000541640 SIL1Q9H173 461 aa15.94■□□□□ 0.14
PRKAB1-206ENST00000541640 TLR7Q9NYK1 1049 aaKnown RBP15.94■□□□□ 0.14
PRKAB1-206ENST00000541640 NMIQ13287 307 aaPredicted RBP15.94■□□□□ 0.14
PRKAB1-206ENST00000541640 RABL6Q3YEC7 729 aaPredicted RBP15.94■□□□□ 0.14
PRKAB1-206ENST00000541640 MAP4K1Q92918 833 aa15.94■□□□□ 0.14
PRKAB1-206ENST00000541640 ZSCAN31Q96LW9 406 aaPredicted RBP15.94■□□□□ 0.14
PRKAB1-206ENST00000541640 RBSNQ9H1K0 784 aa15.94■□□□□ 0.14
PRKAB1-206ENST00000541640 RFX5P48382 616 aaPredicted RBP15.93■□□□□ 0.14
PRKAB1-206ENST00000541640 ADCK5Q3MIX3 580 aa15.93■□□□□ 0.14
PRKAB1-206ENST00000541640 TMEM87AQ8NBN3 555 aa15.93■□□□□ 0.14
PRKAB1-206ENST00000541640 JAKMIP1Q96N16 626 aaKnown RBP15.93■□□□□ 0.14
PRKAB1-206ENST00000541640 PDRG1Q9NUG6 133 aa15.93■□□□□ 0.14
PRKAB1-206ENST00000541640 ZKSCAN1P17029 563 aaPredicted RBP15.93■□□□□ 0.14
PRKAB1-206ENST00000541640 CABP4P57796 275 aa15.93■□□□□ 0.14
PRKAB1-206ENST00000541640 KLHDC4Q8TBB5 520 aa15.93■□□□□ 0.14
PRKAB1-206ENST00000541640 FAM227BQ96M60 508 aa15.93■□□□□ 0.14
PRKAB1-206ENST00000541640 SH2B1Q9NRF2 756 aaPredicted RBP15.93■□□□□ 0.14
PRKAB1-206ENST00000541640 RBM8AQ9Y5S9 174 aaKnown RBP15.93■□□□□ 0.14
PRKAB1-206ENST00000541640 CYP46A1Q9Y6A2 500 aa15.93■□□□□ 0.14
PRKAB1-206ENST00000541640 ERBB4Q15303 1308 aa15.92■□□□□ 0.14
PRKAB1-206ENST00000541640 ZSCAN22P10073 491 aaPredicted RBP15.92■□□□□ 0.14
PRKAB1-206ENST00000541640 CPA1P15085 419 aa15.92■□□□□ 0.14
PRKAB1-206ENST00000541640 MED23Q9ULK4 1368 aa15.92■□□□□ 0.14
PRKAB1-206ENST00000541640 CREB3L3Q68CJ9 461 aa15.91■□□□□ 0.14
PRKAB1-206ENST00000541640 BOLA2Q9H3K6 86 aa15.91■□□□□ 0.14
PRKAB1-206ENST00000541640 SMC3Q9UQE7 1217 aa15.91■□□□□ 0.14
PRKAB1-206ENST00000541640 JCADQ9P266 1359 aa15.91■□□□□ 0.14
PRKAB1-206ENST00000541640 UBR2Q8IWV8 1755 aa15.91■□□□□ 0.14
PRKAB1-206ENST00000541640 TCHHQ07283 1943 aa15.91■□□□□ 0.14
PRKAB1-206ENST00000541640 SYCE3A1L190 88 aa15.91■□□□□ 0.14
PRKAB1-206ENST00000541640 STX6O43752 255 aa15.91■□□□□ 0.14
PRKAB1-206ENST00000541640 PTPN12Q05209 780 aaKnown RBP15.91■□□□□ 0.14
PRKAB1-206ENST00000541640 PLBD2Q8NHP8 589 aa15.91■□□□□ 0.14
PRKAB1-206ENST00000541640 SYAP1Q96A49 352 aaPredicted RBP15.91■□□□□ 0.14
PRKAB1-206ENST00000541640 FSD1Q9BTV5 496 aa15.91■□□□□ 0.14
PRKAB1-206ENST00000541640 LARGE1O95461 756 aa15.9■□□□□ 0.14
PRKAB1-206ENST00000541640 SYT1P21579 422 aa15.9■□□□□ 0.14
PRKAB1-206ENST00000541640 A0A0D9SFI3 127 aa15.9■□□□□ 0.14
PRKAB1-206ENST00000541640 PIP4K2AP48426 406 aaPredicted RBP15.9■□□□□ 0.14
PRKAB1-206ENST00000541640 CASP7P55210 303 aa15.9■□□□□ 0.14
PRKAB1-206ENST00000541640 USP48Q86UV5 1035 aa15.9■□□□□ 0.14
PRKAB1-206ENST00000541640 LARP6Q9BRS8 491 aaKnown RBP15.9■□□□□ 0.14
PRKAB1-206ENST00000541640 NUP188Q5SRE5 1749 aa15.89■□□□□ 0.13
PRKAB1-206ENST00000541640 SLC27A2O14975 620 aa15.89■□□□□ 0.13
PRKAB1-206ENST00000541640 ATP5JP18859 108 aa15.89■□□□□ 0.13
PRKAB1-206ENST00000541640 PSMA5P28066 241 aa15.89■□□□□ 0.13
PRKAB1-206ENST00000541640 TNNI3KQ59H18 835 aa15.89■□□□□ 0.13
PRKAB1-206ENST00000541640 UBE3BQ7Z3V4 1068 aa15.89■□□□□ 0.13
PRKAB1-206ENST00000541640 FPGT-TNNI3KV9GXZ4 949 aa15.89■□□□□ 0.13
PRKAB1-206ENST00000541640 RFX7Q2KHR2 1363 aa15.89■□□□□ 0.13
PRKAB1-206ENST00000541640 PDLIM2Q96JY6 352 aa15.89■□□□□ 0.13
PRKAB1-206ENST00000541640 PAPPAQ13219 1627 aa15.89■□□□□ 0.13
PRKAB1-206ENST00000541640 A0A087WZG4 1122 aa15.88■□□□□ 0.13
PRKAB1-206ENST00000541640 F13A1P00488 732 aa15.88■□□□□ 0.13
PRKAB1-206ENST00000541640 KCNJ4P48050 445 aa15.88■□□□□ 0.13
PRKAB1-206ENST00000541640 RNF20Q5VTR2 975 aa15.88■□□□□ 0.13
PRKAB1-206ENST00000541640 CCDC83Q8IWF9 413 aa15.88■□□□□ 0.13
PRKAB1-206ENST00000541640 ALDH8A1Q9H2A2 487 aaPredicted RBP15.88■□□□□ 0.13
PRKAB1-206ENST00000541640 ATP6V1DQ9Y5K8 247 aa15.88■□□□□ 0.13
PRKAB1-206ENST00000541640 PCDH11XQ9BZA7 1347 aa15.88■□□□□ 0.13
PRKAB1-206ENST00000541640 PCDH11YQ9BZA8 1340 aa15.88■□□□□ 0.13
PRKAB1-206ENST00000541640 GADD45BO75293 160 aaPredicted RBP15.88■□□□□ 0.13
PRKAB1-206ENST00000541640 TFCP2Q12800 502 aa15.88■□□□□ 0.13
PRKAB1-206ENST00000541640 GDPD2Q9HCC8 539 aa15.88■□□□□ 0.13
PRKAB1-206ENST00000541640 DBNLQ9UJU6 430 aaKnown RBP15.88■□□□□ 0.13
PRKAB1-206ENST00000541640 WDR17Q8IZU2 1322 aa15.87■□□□□ 0.13
PRKAB1-206ENST00000541640 GJB2P29033 226 aa15.87■□□□□ 0.13
PRKAB1-206ENST00000541640 TSGA10IPQ3SY00 556 aa15.87■□□□□ 0.13
PRKAB1-206ENST00000541640 HS1BP3Q53T59 392 aa15.87■□□□□ 0.13
PRKAB1-206ENST00000541640 JARID2Q92833 1246 aaPredicted RBP15.87■□□□□ 0.13
PRKAB1-206ENST00000541640 HMG20BQ9P0W2 317 aa15.87■□□□□ 0.13
PRKAB1-206ENST00000541640 ATP5J2-PTCD1G3V325 749 aa15.86■□□□□ 0.13
PRKAB1-206ENST00000541640 PTCD1O75127 700 aaKnown RBP15.86■□□□□ 0.13
PRKAB1-206ENST00000541640 PHF14O94880 888 aa15.86■□□□□ 0.13
PRKAB1-206ENST00000541640 ST3GAL1Q11201 340 aa15.86■□□□□ 0.13
PRKAB1-206ENST00000541640 ME3Q16798 604 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms