RNA–Protein interactions for RNA: ENST00000541614.5

LRTOMT-218, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-218ENST00000541614 NPR1P16066 1061 aa8.08□□□□□ -1.12
LRTOMT-218ENST00000541614 GOLGA2Q08379 1002 aa8.08□□□□□ -1.12
LRTOMT-218ENST00000541614 CRY2Q49AN0 593 aa8.08□□□□□ -1.12
LRTOMT-218ENST00000541614 ERFEQ4G0M1 354 aa8.08□□□□□ -1.12
LRTOMT-218ENST00000541614 NLRP10Q86W26 655 aa8.08□□□□□ -1.12
LRTOMT-218ENST00000541614 NUTM1Q86Y26 1132 aa8.08□□□□□ -1.12
LRTOMT-218ENST00000541614 ISCA1Q9BUE6 129 aa8.08□□□□□ -1.12
LRTOMT-218ENST00000541614 UTP14AQ9BVJ6 771 aaKnown RBP8.08□□□□□ -1.12
LRTOMT-218ENST00000541614 TIAM2Q8IVF5 1701 aa8.08□□□□□ -1.12
LRTOMT-218ENST00000541614 DDX60Q8IY21 1712 aaKnown RBP8.08□□□□□ -1.12
LRTOMT-218ENST00000541614 CCDC88AQ3V6T2 1871 aa8.08□□□□□ -1.12
LRTOMT-218ENST00000541614 DICER1Q9UPY3 1922 aaKnown RBP8.07□□□□□ -1.12
LRTOMT-218ENST00000541614 SLC10A5Q5PT55 438 aa8.07□□□□□ -1.12
LRTOMT-218ENST00000541614 SOGA3Q5TF21 947 aa8.07□□□□□ -1.12
LRTOMT-218ENST00000541614 PRPF40BQ6NWY9 871 aaKnown RBP8.07□□□□□ -1.12
LRTOMT-218ENST00000541614 STK31Q9BXU1 1019 aa8.07□□□□□ -1.12
LRTOMT-218ENST00000541614 MYH16Q9H6N6 1097 aa8.07□□□□□ -1.12
LRTOMT-218ENST00000541614 PHAXQ9H814 394 aaKnown RBP8.07□□□□□ -1.12
LRTOMT-218ENST00000541614 SPINK5Q9NQ38 1064 aaPredicted RBP8.07□□□□□ -1.12
LRTOMT-218ENST00000541614 NFKBIEO00221 500 aa8.06□□□□□ -1.12
LRTOMT-218ENST00000541614 C21orf2O43822 256 aa8.06□□□□□ -1.12
LRTOMT-218ENST00000541614 DDX58O95786 925 aaKnown RBP8.06□□□□□ -1.12
LRTOMT-218ENST00000541614 ALDH1B1P30837 517 aa8.06□□□□□ -1.12
LRTOMT-218ENST00000541614 HOXA10P31260 410 aaPredicted RBP8.06□□□□□ -1.12
LRTOMT-218ENST00000541614 RASSF7Q02833 373 aa8.06□□□□□ -1.12
LRTOMT-218ENST00000541614 EXOSC9Q06265 439 aaKnown RBP8.06□□□□□ -1.12
LRTOMT-218ENST00000541614 TRIM28Q13263 835 aaKnown RBP8.06□□□□□ -1.12
LRTOMT-218ENST00000541614 DIEXFQ68CQ4 756 aaKnown RBP8.06□□□□□ -1.12
LRTOMT-218ENST00000541614 RIC3Q7Z5B4 369 aa8.06□□□□□ -1.12
LRTOMT-218ENST00000541614 TRMT112Q9UI30 125 aaKnown RBP8.06□□□□□ -1.12
LRTOMT-218ENST00000541614 SH3TC1Q8TE82 1336 aa8.05□□□□□ -1.12
LRTOMT-218ENST00000541614 LTBP3Q9NS15 1303 aa8.05□□□□□ -1.12
LRTOMT-218ENST00000541614 ZC3H4Q9UPT8 1303 aaKnown RBP8.05□□□□□ -1.12
LRTOMT-218ENST00000541614 ATP5J2-PTCD1G3V325 749 aa8.05□□□□□ -1.12
LRTOMT-218ENST00000541614 VAMP4O75379 141 aa8.05□□□□□ -1.12
LRTOMT-218ENST00000541614 LMNB1P20700 586 aa8.05□□□□□ -1.12
LRTOMT-218ENST00000541614 CCDC93Q567U6 631 aa8.05□□□□□ -1.12
LRTOMT-218ENST00000541614 C9orf131Q5VYM1 1079 aa8.05□□□□□ -1.12
LRTOMT-218ENST00000541614 C3orf67Q6ZVT6 689 aa8.05□□□□□ -1.12
LRTOMT-218ENST00000541614 C7orf43Q8WVR3 580 aa8.05□□□□□ -1.12
LRTOMT-218ENST00000541614 RPGRQ92834 1020 aaKnown RBP8.05□□□□□ -1.12
LRTOMT-218ENST00000541614 NLRP3Q96P20 1036 aa8.05□□□□□ -1.12
LRTOMT-218ENST00000541614 CRAMP1Q96RY5 1269 aa8.05□□□□□ -1.12
LRTOMT-218ENST00000541614 RNF181Q9P0P0 153 aa8.05□□□□□ -1.12
LRTOMT-218ENST00000541614 SNED1Q8TER0 1413 aa8.04□□□□□ -1.12
LRTOMT-218ENST00000541614 E9PSI1 815 aa8.04□□□□□ -1.12
LRTOMT-218ENST00000541614 TCERG1O14776 1098 aaKnown RBP8.04□□□□□ -1.12
LRTOMT-218ENST00000541614 SLC4A2P04920 1241 aa8.04□□□□□ -1.12
LRTOMT-218ENST00000541614 PRELPP51888 382 aa8.04□□□□□ -1.12
LRTOMT-218ENST00000541614 KSR2Q6VAB6 950 aa8.04□□□□□ -1.12
LRTOMT-218ENST00000541614 CCDC191Q8NCU4 936 aa8.04□□□□□ -1.12
LRTOMT-218ENST00000541614 RBM17Q96I25 401 aaKnown RBP8.04□□□□□ -1.12
LRTOMT-218ENST00000541614 MYD88Q99836 296 aa8.04□□□□□ -1.12
LRTOMT-218ENST00000541614 METTL22Q9BUU2 404 aaPredicted RBP8.04□□□□□ -1.12
LRTOMT-218ENST00000541614 TAOK3Q9H2K8 898 aa8.04□□□□□ -1.12
LRTOMT-218ENST00000541614 GPBP1L1Q9HC44 474 aaPredicted RBP8.04□□□□□ -1.12
LRTOMT-218ENST00000541614 ZNF219Q9P2Y4 722 aaPredicted RBP8.04□□□□□ -1.12
LRTOMT-218ENST00000541614 MAP3K2Q9Y2U5 619 aa8.04□□□□□ -1.12
LRTOMT-218ENST00000541614 LRRC37AA6NMS7 1700 aa8.03□□□□□ -1.12
LRTOMT-218ENST00000541614 PI4KAP2A4QPH2 592 aa8.03□□□□□ -1.12
LRTOMT-218ENST00000541614 HCLS1P14317 486 aaPredicted RBP8.03□□□□□ -1.12
LRTOMT-218ENST00000541614 FLIIQ13045 1269 aa8.03□□□□□ -1.12
LRTOMT-218ENST00000541614 MAPK8IP2Q13387 824 aaPredicted RBP8.03□□□□□ -1.12
LRTOMT-218ENST00000541614 CC2D2BQ6DHV5 1058 aa8.03□□□□□ -1.12
LRTOMT-218ENST00000541614 G2E3Q7L622 706 aa8.03□□□□□ -1.12
LRTOMT-218ENST00000541614 SYNE4Q8N205 404 aa8.03□□□□□ -1.12
LRTOMT-218ENST00000541614 PI4KAP1Q8N8J0 262 aa8.03□□□□□ -1.12
LRTOMT-218ENST00000541614 FAM89AQ96GI7 184 aa8.03□□□□□ -1.12
LRTOMT-218ENST00000541614 CWC25Q9NXE8 425 aaPredicted RBP8.03□□□□□ -1.12
LRTOMT-218ENST00000541614 MYH3P11055 1940 aa8.03□□□□□ -1.12
LRTOMT-218ENST00000541614 ABCC4O15439 1325 aa8.03□□□□□ -1.12
LRTOMT-218ENST00000541614 PPEF1O14829 653 aaPredicted RBP8.02□□□□□ -1.13
LRTOMT-218ENST00000541614 PCCAP05165 728 aaPredicted RBP8.02□□□□□ -1.13
LRTOMT-218ENST00000541614 IGKV5-2P06315 115 aa8.02□□□□□ -1.13
LRTOMT-218ENST00000541614 HSP90B1P14625 803 aaKnown RBP8.02□□□□□ -1.13
LRTOMT-218ENST00000541614 FKBP4Q02790 459 aaKnown RBP eCLIP8.02□□□□□ -1.13
LRTOMT-218ENST00000541614 SLFN5Q08AF3 891 aa8.02□□□□□ -1.13
LRTOMT-218ENST00000541614 NEXNQ0ZGT2 675 aa8.02□□□□□ -1.13
LRTOMT-218ENST00000541614 FKBP5Q13451 457 aaPredicted RBP8.02□□□□□ -1.13
LRTOMT-218ENST00000541614 SF3B3Q15393 1217 aaKnown RBP8.02□□□□□ -1.13
LRTOMT-218ENST00000541614 GRIPAP1Q4V328 841 aa8.02□□□□□ -1.13
LRTOMT-218ENST00000541614 RTKN2Q8IZC4 609 aa8.02□□□□□ -1.13
LRTOMT-218ENST00000541614 MIER1Q8N108 512 aa8.02□□□□□ -1.13
LRTOMT-218ENST00000541614 ZBTB38Q8NAP3 1195 aaPredicted RBP8.02□□□□□ -1.13
LRTOMT-218ENST00000541614 ZNF526Q8TF50 670 aaPredicted RBP8.02□□□□□ -1.13
LRTOMT-218ENST00000541614 TAF1P21675 1872 aa8.02□□□□□ -1.13
LRTOMT-218ENST00000541614 CDHR2Q9BYE9 1310 aa8.02□□□□□ -1.13
LRTOMT-218ENST00000541614 IRS4O14654 1257 aaPredicted RBP8.01□□□□□ -1.13
LRTOMT-218ENST00000541614 BBOX1O75936 387 aa8.01□□□□□ -1.13
LRTOMT-218ENST00000541614 GRAPQ13588 217 aa8.01□□□□□ -1.13
LRTOMT-218ENST00000541614 OLFM4Q6UX06 510 aa8.01□□□□□ -1.13
LRTOMT-218ENST00000541614 DDX46Q7L014 1031 aaKnown RBP8.01□□□□□ -1.13
LRTOMT-218ENST00000541614 TRMT2AQ8IZ69 625 aaKnown RBP8.01□□□□□ -1.13
LRTOMT-218ENST00000541614 GRAPLQ8TC17 118 aaPredicted RBP8.01□□□□□ -1.13
LRTOMT-218ENST00000541614 DNAAF4Q8WXU2 420 aa8.01□□□□□ -1.13
LRTOMT-218ENST00000541614 ZNF428Q96B54 188 aa8.01□□□□□ -1.13
LRTOMT-218ENST00000541614 PSMD1Q99460 953 aa8.01□□□□□ -1.13
LRTOMT-218ENST00000541614 ATP6V0A2Q9Y487 856 aa8.01□□□□□ -1.13
LRTOMT-218ENST00000541614 KDM2BQ8NHM5 1336 aa8.01□□□□□ -1.13
LRTOMT-218ENST00000541614 WDR90Q96KV7 1748 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms