RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 IRS1P35568 1242 aa7.55□□□□□ -1.2
SNHG1-217ENST00000541578 NEUROD1Q13562 356 aa7.55□□□□□ -1.2
SNHG1-217ENST00000541578 DGKZQ13574 1117 aa7.55□□□□□ -1.2
SNHG1-217ENST00000541578 SYT9Q86SS6 491 aa7.55□□□□□ -1.2
SNHG1-217ENST00000541578 CLP1Q92989 425 aaKnown RBP7.55□□□□□ -1.2
SNHG1-217ENST00000541578 BTBD6Q96KE9 485 aa7.55□□□□□ -1.2
SNHG1-217ENST00000541578 SLC30A3Q99726 388 aa7.55□□□□□ -1.2
SNHG1-217ENST00000541578 RRAGCQ9HB90 399 aa7.55□□□□□ -1.2
SNHG1-217ENST00000541578 CNTNAP5Q8WYK1 1306 aa7.54□□□□□ -1.2
SNHG1-217ENST00000541578 PHF20L1A8MW92 1017 aa7.54□□□□□ -1.2
SNHG1-217ENST00000541578 RASSF7Q02833 373 aa7.54□□□□□ -1.2
SNHG1-217ENST00000541578 FCHSD1Q86WN1 690 aa7.54□□□□□ -1.2
SNHG1-217ENST00000541578 CXXC1Q9P0U4 656 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-217ENST00000541578 DMGDHQ9UI17 866 aaKnown RBP7.54□□□□□ -1.2
SNHG1-217ENST00000541578 SIN3BO75182 1162 aa7.53□□□□□ -1.2
SNHG1-217ENST00000541578 GSK3AP49840 483 aa7.53□□□□□ -1.2
SNHG1-217ENST00000541578 KANK3Q6NY19 840 aa7.53□□□□□ -1.2
SNHG1-217ENST00000541578 TMEM151AQ8N4L1 468 aa7.53□□□□□ -1.2
SNHG1-217ENST00000541578 IFT43Q96FT9 208 aa7.53□□□□□ -1.2
SNHG1-217ENST00000541578 PODXL2Q9NZ53 605 aa7.53□□□□□ -1.2
SNHG1-217ENST00000541578 MICAL2O94851 1124 aa7.52□□□□□ -1.21
SNHG1-217ENST00000541578 GDF11O95390 407 aa7.52□□□□□ -1.21
SNHG1-217ENST00000541578 EPB42P16452 691 aa7.52□□□□□ -1.21
SNHG1-217ENST00000541578 ALAS2P22557 587 aa7.52□□□□□ -1.21
SNHG1-217ENST00000541578 IDH3AP50213 366 aa7.52□□□□□ -1.21
SNHG1-217ENST00000541578 SNRPNP63162 240 aaKnown RBP7.52□□□□□ -1.21
SNHG1-217ENST00000541578 COX20Q5RI15 118 aa7.52□□□□□ -1.21
SNHG1-217ENST00000541578 COL26A1Q96A83 441 aa7.52□□□□□ -1.21
SNHG1-217ENST00000541578 LRFN2Q9ULH4 789 aa7.52□□□□□ -1.21
SNHG1-217ENST00000541578 ELOA3CA0A087WX78 387 aaPredicted RBP7.51□□□□□ -1.21
SNHG1-217ENST00000541578 ELOA3DA6NLF2 546 aaPredicted RBP7.51□□□□□ -1.21
SNHG1-217ENST00000541578 PTCD1O75127 700 aaKnown RBP7.51□□□□□ -1.21
SNHG1-217ENST00000541578 ATP2B4P23634 1241 aa7.51□□□□□ -1.21
SNHG1-217ENST00000541578 INPP5BP32019 993 aa7.51□□□□□ -1.21
SNHG1-217ENST00000541578 ELOA3BQ3SY89 546 aa7.51□□□□□ -1.21
SNHG1-217ENST00000541578 C16orf46Q6P387 395 aa7.51□□□□□ -1.21
SNHG1-217ENST00000541578 ELOA3Q8NG57 546 aa7.51□□□□□ -1.21
SNHG1-217ENST00000541578 BHMTQ93088 406 aa7.51□□□□□ -1.21
SNHG1-217ENST00000541578 MKL2Q9ULH7 1088 aa7.51□□□□□ -1.21
SNHG1-217ENST00000541578 ADARB2-AS1A8MUL3 147 aa7.5□□□□□ -1.21
SNHG1-217ENST00000541578 ARSDP51689 593 aa7.5□□□□□ -1.21
SNHG1-217ENST00000541578 CHSY3Q70JA7 882 aa7.5□□□□□ -1.21
SNHG1-217ENST00000541578 RAB44Q7Z6P3 723 aaPredicted RBP7.5□□□□□ -1.21
SNHG1-217ENST00000541578 MKNK1Q9BUB5 465 aa7.5□□□□□ -1.21
SNHG1-217ENST00000541578 EFCC1Q9HA90 598 aa7.5□□□□□ -1.21
SNHG1-217ENST00000541578 PIK3R2O00459 728 aa7.49□□□□□ -1.21
SNHG1-217ENST00000541578 HOXB4P17483 251 aaPredicted RBP7.49□□□□□ -1.21
SNHG1-217ENST00000541578 CCINQ13939 588 aa7.49□□□□□ -1.21
SNHG1-217ENST00000541578 NAA30Q147X3 362 aaPredicted RBP7.49□□□□□ -1.21
SNHG1-217ENST00000541578 CAPN12Q6ZSI9 719 aa7.49□□□□□ -1.21
SNHG1-217ENST00000541578 PNMA5Q96PV4 448 aa7.49□□□□□ -1.21
SNHG1-217ENST00000541578 GSX2Q9BZM3 304 aa7.49□□□□□ -1.21
SNHG1-217ENST00000541578 SAP130Q9H0E3 1048 aa7.49□□□□□ -1.21
SNHG1-217ENST00000541578 SLAIN2Q9P270 581 aa7.49□□□□□ -1.21
SNHG1-217ENST00000541578 OPLAHO14841 1288 aa7.48□□□□□ -1.21
SNHG1-217ENST00000541578 BRD2P25440 801 aaKnown RBP7.48□□□□□ -1.21
SNHG1-217ENST00000541578 LINC00114Q6XXX2 140 aa7.48□□□□□ -1.21
SNHG1-217ENST00000541578 TREML1Q86YW5 311 aa7.48□□□□□ -1.21
SNHG1-217ENST00000541578 TNFRSF25Q93038 417 aa7.48□□□□□ -1.21
SNHG1-217ENST00000541578 MDFIQ99750 246 aa7.48□□□□□ -1.21
SNHG1-217ENST00000541578 C11orf16Q9NQ32 467 aa7.48□□□□□ -1.21
SNHG1-217ENST00000541578 ADH7P40394 386 aa7.47□□□□□ -1.21
SNHG1-217ENST00000541578 RANGAP1P46060 587 aaPredicted RBP7.47□□□□□ -1.21
SNHG1-217ENST00000541578 RTCBQ9Y3I0 505 aaKnown RBP7.47□□□□□ -1.21
SNHG1-217ENST00000541578 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.47□□□□□ -1.21
SNHG1-217ENST00000541578 GNB5O14775 395 aa7.46□□□□□ -1.22
SNHG1-217ENST00000541578 GRNP28799 593 aaKnown RBP7.46□□□□□ -1.22
SNHG1-217ENST00000541578 DGKGP49619 791 aa7.46□□□□□ -1.22
SNHG1-217ENST00000541578 IGFLR1Q9H665 355 aa7.46□□□□□ -1.22
SNHG1-217ENST00000541578 TMEM88BA6NKF7 163 aa7.45□□□□□ -1.22
SNHG1-217ENST00000541578 MAP3K6O95382 1288 aa7.45□□□□□ -1.22
SNHG1-217ENST00000541578 NFKB1P19838 968 aa7.45□□□□□ -1.22
SNHG1-217ENST00000541578 TBC1D8BQ0IIM8 1120 aa7.45□□□□□ -1.22
SNHG1-217ENST00000541578 RGL4Q8IZJ4 473 aa7.45□□□□□ -1.22
SNHG1-217ENST00000541578 CMTR1Q8N1G2 835 aaKnown RBP7.45□□□□□ -1.22
SNHG1-217ENST00000541578 KCTD17Q8N5Z5 321 aa7.45□□□□□ -1.22
SNHG1-217ENST00000541578 UBE2OQ9C0C9 1292 aaKnown RBP7.45□□□□□ -1.22
SNHG1-217ENST00000541578 TNFRSF10BO14763 440 aa7.44□□□□□ -1.22
SNHG1-217ENST00000541578 ETFBKMTQ8IXQ9 262 aa7.44□□□□□ -1.22
SNHG1-217ENST00000541578 DCAF5Q96JK2 942 aa7.44□□□□□ -1.22
SNHG1-217ENST00000541578 STIM2Q9P246 746 aa7.44□□□□□ -1.22
SNHG1-217ENST00000541578 SEPT3Q9UH03 358 aa7.44□□□□□ -1.22
SNHG1-217ENST00000541578 USP20Q9Y2K6 914 aa7.44□□□□□ -1.22
SNHG1-217ENST00000541578 STARD13Q9Y3M8 1113 aa7.44□□□□□ -1.22
SNHG1-217ENST00000541578 SASH3O75995 380 aa7.43□□□□□ -1.22
SNHG1-217ENST00000541578 TARSP26639 723 aaKnown RBP7.43□□□□□ -1.22
SNHG1-217ENST00000541578 KRT25Q7Z3Z0 450 aa7.43□□□□□ -1.22
SNHG1-217ENST00000541578 ALYREFQ86V81 257 aaKnown RBP7.43□□□□□ -1.22
SNHG1-217ENST00000541578 DNAJB12Q9NXW2 375 aaKnown RBP7.43□□□□□ -1.22
SNHG1-217ENST00000541578 FAM13BQ9NYF5 915 aa7.43□□□□□ -1.22
SNHG1-217ENST00000541578 M0R082 166 aa7.42□□□□□ -1.22
SNHG1-217ENST00000541578 XYLBO75191 536 aa7.42□□□□□ -1.22
SNHG1-217ENST00000541578 EGFRP00533 1210 aa7.42□□□□□ -1.22
SNHG1-217ENST00000541578 SSFA2P28290 1259 aa7.42□□□□□ -1.22
SNHG1-217ENST00000541578 PCSK7Q16549 785 aa7.42□□□□□ -1.22
SNHG1-217ENST00000541578 MICALL1Q8N3F8 863 aa7.42□□□□□ -1.22
SNHG1-217ENST00000541578 ZNF417Q8TAU3 575 aa7.42□□□□□ -1.22
SNHG1-217ENST00000541578 PIK3R5Q8WYR1 880 aa7.42□□□□□ -1.22
SNHG1-217ENST00000541578 ZNF587Q96SQ5 575 aaPredicted RBP7.42□□□□□ -1.22
SNHG1-217ENST00000541578 SUV39H2Q9H5I1 410 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms