RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 USP17L13C9JLJ4 530 aa7.77□□□□□ -1.17
KNTC1-211ENST00000541427 USP17L12C9JPN9 530 aa7.77□□□□□ -1.17
KNTC1-211ENST00000541427 USP17L11C9JVI0 530 aa7.77□□□□□ -1.17
KNTC1-211ENST00000541427 USP17L21D6R901 530 aa7.77□□□□□ -1.17
KNTC1-211ENST00000541427 USP17L18D6R9N7 530 aa7.77□□□□□ -1.17
KNTC1-211ENST00000541427 USP17L22D6RA61 530 aa7.77□□□□□ -1.17
KNTC1-211ENST00000541427 USP17L17D6RBQ6 530 aa7.77□□□□□ -1.17
KNTC1-211ENST00000541427 USP17L19D6RCP7 530 aa7.77□□□□□ -1.17
KNTC1-211ENST00000541427 USP17L20D6RJB6 530 aa7.77□□□□□ -1.17
KNTC1-211ENST00000541427 USP17L24Q0WX57 530 aa7.77□□□□□ -1.17
KNTC1-211ENST00000541427 ADGRE1Q14246 886 aa7.77□□□□□ -1.17
KNTC1-211ENST00000541427 MBTPS1Q14703 1052 aa7.77□□□□□ -1.17
KNTC1-211ENST00000541427 MTFR1Q15390 333 aa7.77□□□□□ -1.17
KNTC1-211ENST00000541427 CCDC102BQ68D86 513 aa7.77□□□□□ -1.17
KNTC1-211ENST00000541427 SIX5Q8N196 739 aa7.77□□□□□ -1.17
KNTC1-211ENST00000541427 LARGE2Q8N3Y3 721 aa7.77□□□□□ -1.17
KNTC1-211ENST00000541427 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.77□□□□□ -1.17
KNTC1-211ENST00000541427 TNFRSF25Q93038 417 aa7.77□□□□□ -1.17
KNTC1-211ENST00000541427 PBXIP1Q96AQ6 731 aa7.77□□□□□ -1.17
KNTC1-211ENST00000541427 KRTAP4-8A0A0G2JLE6 195 aa7.76□□□□□ -1.17
KNTC1-211ENST00000541427 TXLNAP40222 546 aa7.76□□□□□ -1.17
KNTC1-211ENST00000541427 TRAPPC3LQ5T215 181 aa7.76□□□□□ -1.17
KNTC1-211ENST00000541427 ARXQ96QS3 562 aa7.76□□□□□ -1.17
KNTC1-211ENST00000541427 SLC30A3Q99726 388 aa7.76□□□□□ -1.17
KNTC1-211ENST00000541427 ZNF358Q9NW07 568 aa7.76□□□□□ -1.17
KNTC1-211ENST00000541427 SELPP16109 830 aa7.75□□□□□ -1.17
KNTC1-211ENST00000541427 LARP1Q6PKG0 1096 aaKnown RBP7.75□□□□□ -1.17
KNTC1-211ENST00000541427 LRRC69Q6ZNQ3 347 aa7.75□□□□□ -1.17
KNTC1-211ENST00000541427 TXNRD3Q86VQ6 643 aa7.75□□□□□ -1.17
KNTC1-211ENST00000541427 SFI1A8K8P3 1242 aa7.74□□□□□ -1.17
KNTC1-211ENST00000541427 ADH7P40394 386 aa7.74□□□□□ -1.17
KNTC1-211ENST00000541427 SFSWAPQ12872 951 aaKnown RBP7.74□□□□□ -1.17
KNTC1-211ENST00000541427 ZMIZ1Q9ULJ6 1067 aa7.74□□□□□ -1.17
KNTC1-211ENST00000541427 ELNP15502 786 aa7.73□□□□□ -1.17
KNTC1-211ENST00000541427 DPYDQ12882 1025 aa7.73□□□□□ -1.17
KNTC1-211ENST00000541427 C20orf204Q6ZNR8 217 aa7.73□□□□□ -1.17
KNTC1-211ENST00000541427 ANKMY2Q8IV38 441 aa7.73□□□□□ -1.17
KNTC1-211ENST00000541427 TP53INP1Q96A56 240 aa7.73□□□□□ -1.17
KNTC1-211ENST00000541427 A0A0A0MRY4 1105 aa7.72□□□□□ -1.17
KNTC1-211ENST00000541427 ATG7O95352 703 aa7.72□□□□□ -1.17
KNTC1-211ENST00000541427 EPHA4P54764 986 aa7.72□□□□□ -1.17
KNTC1-211ENST00000541427 SPEM2Q0P670 501 aa7.72□□□□□ -1.17
KNTC1-211ENST00000541427 ZDHHC1Q8WTX9 485 aa7.72□□□□□ -1.17
KNTC1-211ENST00000541427 LENG1Q96BZ8 264 aaPredicted RBP7.72□□□□□ -1.17
KNTC1-211ENST00000541427 NEUROD4Q9HD90 331 aa7.72□□□□□ -1.17
KNTC1-211ENST00000541427 NOVA2Q9UNW9 492 aaKnown RBP7.72□□□□□ -1.17
KNTC1-211ENST00000541427 LILRB5O75023 590 aa7.71□□□□□ -1.18
KNTC1-211ENST00000541427 SEC13P55735 322 aa7.71□□□□□ -1.18
KNTC1-211ENST00000541427 NRG1Q02297 640 aaPredicted RBP7.71□□□□□ -1.18
KNTC1-211ENST00000541427 NEUROD1Q13562 356 aa7.71□□□□□ -1.18
KNTC1-211ENST00000541427 ELOAQ14241 798 aaKnown RBP7.71□□□□□ -1.18
KNTC1-211ENST00000541427 SHISA2Q6UWI4 295 aa7.71□□□□□ -1.18
KNTC1-211ENST00000541427 RAB44Q7Z6P3 723 aaPredicted RBP7.71□□□□□ -1.18
KNTC1-211ENST00000541427 TSEN2Q8NCE0 465 aaKnown RBP7.71□□□□□ -1.18
KNTC1-211ENST00000541427 STK32AQ8WU08 396 aa7.71□□□□□ -1.18
KNTC1-211ENST00000541427 L3MBTL2Q969R5 705 aa7.71□□□□□ -1.18
KNTC1-211ENST00000541427 M0R2N6 131 aa7.7□□□□□ -1.18
KNTC1-211ENST00000541427 BACH1O14867 736 aa7.7□□□□□ -1.18
KNTC1-211ENST00000541427 TNS4Q8IZW8 715 aa7.7□□□□□ -1.18
KNTC1-211ENST00000541427 EML1O00423 815 aa7.69□□□□□ -1.18
KNTC1-211ENST00000541427 LGR5O75473 907 aa7.69□□□□□ -1.18
KNTC1-211ENST00000541427 PPP1R15AO75807 674 aaPredicted RBP7.69□□□□□ -1.18
KNTC1-211ENST00000541427 RAC1P63000 192 aa7.69□□□□□ -1.18
KNTC1-211ENST00000541427 MCTP1Q6DN14 999 aa7.69□□□□□ -1.18
KNTC1-211ENST00000541427 SCHIP1Q9P0W5 487 aaPredicted RBP7.69□□□□□ -1.18
KNTC1-211ENST00000541427 NOS2P35228 1153 aa7.68□□□□□ -1.18
KNTC1-211ENST00000541427 TEAD4Q15561 434 aa7.68□□□□□ -1.18
KNTC1-211ENST00000541427 TMEM164Q5U3C3 297 aa7.68□□□□□ -1.18
KNTC1-211ENST00000541427 C7orf43Q8WVR3 580 aa7.68□□□□□ -1.18
KNTC1-211ENST00000541427 RBM19Q9Y4C8 960 aaKnown RBP7.68□□□□□ -1.18
KNTC1-211ENST00000541427 FAM69CQ0P6D2 419 aa7.67□□□□□ -1.18
KNTC1-211ENST00000541427 TBCELQ5QJ74 424 aa7.67□□□□□ -1.18
KNTC1-211ENST00000541427 SLC9A9Q8IVB4 645 aa7.67□□□□□ -1.18
KNTC1-211ENST00000541427 FAM200AQ8TCP9 573 aa7.67□□□□□ -1.18
KNTC1-211ENST00000541427 SSBP4Q9BWG4 385 aaPredicted RBP7.67□□□□□ -1.18
KNTC1-211ENST00000541427 TSPAN10Q9H1Z9 355 aaPredicted RBP7.67□□□□□ -1.18
KNTC1-211ENST00000541427 USP21Q9UK80 565 aa7.67□□□□□ -1.18
KNTC1-211ENST00000541427 ZNF232Q9UNY5 417 aa7.67□□□□□ -1.18
KNTC1-211ENST00000541427 GPC6Q9Y625 555 aaPredicted RBP7.67□□□□□ -1.18
KNTC1-211ENST00000541427 C21orf2O43822 256 aa7.66□□□□□ -1.18
KNTC1-211ENST00000541427 RNF112Q9ULX5 631 aa7.66□□□□□ -1.18
KNTC1-211ENST00000541427 JPH1Q9HDC5 661 aaPredicted RBP7.65□□□□□ -1.18
KNTC1-211ENST00000541427 BRD7Q9NPI1 651 aa7.65□□□□□ -1.18
KNTC1-211ENST00000541427 ACIN1Q9UKV3 1341 aaKnown RBP7.65□□□□□ -1.18
KNTC1-211ENST00000541427 TBC1D8BQ0IIM8 1120 aa7.64□□□□□ -1.19
KNTC1-211ENST00000541427 GAS2L2Q8NHY3 880 aa7.64□□□□□ -1.19
KNTC1-211ENST00000541427 RHPN1Q8TCX5 695 aa7.64□□□□□ -1.19
KNTC1-211ENST00000541427 NUDT8Q8WV74 236 aa7.64□□□□□ -1.19
KNTC1-211ENST00000541427 CEP63Q96MT8 703 aa7.64□□□□□ -1.19
KNTC1-211ENST00000541427 HINFPQ9BQA5 517 aa7.64□□□□□ -1.19
KNTC1-211ENST00000541427 SLAIN2Q9P270 581 aa7.64□□□□□ -1.19
KNTC1-211ENST00000541427 CARNS1A5YM72 827 aa7.63□□□□□ -1.19
KNTC1-211ENST00000541427 TMEM88BA6NKF7 163 aa7.63□□□□□ -1.19
KNTC1-211ENST00000541427 KCNQ4P56696 695 aa7.63□□□□□ -1.19
KNTC1-211ENST00000541427 SWI5Q1ZZU3 235 aa7.63□□□□□ -1.19
KNTC1-211ENST00000541427 SH3PXD2AQ5TCZ1 1133 aa7.63□□□□□ -1.19
KNTC1-211ENST00000541427 FMR1NBQ8N0W7 255 aaPredicted RBP7.63□□□□□ -1.19
KNTC1-211ENST00000541427 BHMTQ93088 406 aa7.63□□□□□ -1.19
KNTC1-211ENST00000541427 UBE2OQ9C0C9 1292 aaKnown RBP7.63□□□□□ -1.19
KNTC1-211ENST00000541427 IGFLR1Q9H665 355 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms