RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 ZSCAN22P10073 491 aaPredicted RBP11.51□□□□□ -0.57
CNOT4-212ENST00000541284 SYT1P21579 422 aa11.51□□□□□ -0.57
CNOT4-212ENST00000541284 CWC27Q6UX04 472 aaKnown RBP11.51□□□□□ -0.57
CNOT4-212ENST00000541284 CNTROBQ8N137 903 aa11.51□□□□□ -0.57
CNOT4-212ENST00000541284 PA2G4Q9UQ80 394 aaKnown RBP11.51□□□□□ -0.57
CNOT4-212ENST00000541284 SCN7AQ01118 1682 aa11.51□□□□□ -0.57
CNOT4-212ENST00000541284 NECTIN1Q15223 517 aa11.51□□□□□ -0.57
CNOT4-212ENST00000541284 ESCO1Q5FWF5 840 aa11.51□□□□□ -0.57
CNOT4-212ENST00000541284 MPRIPQ6WCQ1 1025 aa11.51□□□□□ -0.57
CNOT4-212ENST00000541284 KRT28Q7Z3Y7 464 aa11.51□□□□□ -0.57
CNOT4-212ENST00000541284 RNF214Q8ND24 703 aa11.51□□□□□ -0.57
CNOT4-212ENST00000541284 TSPY26PQ9H489 355 aa11.51□□□□□ -0.57
CNOT4-212ENST00000541284 RRP9O43818 475 aaKnown RBP11.51□□□□□ -0.57
CNOT4-212ENST00000541284 DTNBO60941 627 aa11.51□□□□□ -0.57
CNOT4-212ENST00000541284 SASH1O94885 1247 aa11.51□□□□□ -0.57
CNOT4-212ENST00000541284 ZSWIM6Q9HCJ5 1215 aa11.51□□□□□ -0.57
CNOT4-212ENST00000541284 LIMCH1Q9UPQ0 1083 aa11.51□□□□□ -0.57
CNOT4-212ENST00000541284 BTBD11A6QL63 1104 aa11.5□□□□□ -0.57
CNOT4-212ENST00000541284 XPCQ01831 940 aaPredicted RBP11.5□□□□□ -0.57
CNOT4-212ENST00000541284 FOXD4L6Q3SYB3 417 aaPredicted RBP11.5□□□□□ -0.57
CNOT4-212ENST00000541284 FOXD4L3Q6VB84 417 aaPredicted RBP11.5□□□□□ -0.57
CNOT4-212ENST00000541284 MAP3K2Q9Y2U5 619 aa11.5□□□□□ -0.57
CNOT4-212ENST00000541284 MYH7P12883 1935 aa11.5□□□□□ -0.57
CNOT4-212ENST00000541284 ALDH1L1O75891 902 aa11.5□□□□□ -0.57
CNOT4-212ENST00000541284 GLRX3O76003 335 aaKnown RBP11.5□□□□□ -0.57
CNOT4-212ENST00000541284 CWF19L2Q2TBE0 894 aaKnown RBP11.5□□□□□ -0.57
CNOT4-212ENST00000541284 NKX1-1Q15270 411 aaPredicted RBP11.49□□□□□ -0.57
CNOT4-212ENST00000541284 ZNF530Q6P9A1 599 aaPredicted RBP11.49□□□□□ -0.57
CNOT4-212ENST00000541284 ANP32BQ92688 251 aaKnown RBP11.49□□□□□ -0.57
CNOT4-212ENST00000541284 TM6SF1Q9BZW5 370 aa11.49□□□□□ -0.57
CNOT4-212ENST00000541284 MTMR6Q9Y217 621 aa11.49□□□□□ -0.57
CNOT4-212ENST00000541284 F13A1P00488 732 aa11.49□□□□□ -0.57
CNOT4-212ENST00000541284 SUCLG2Q96I99 432 aa11.49□□□□□ -0.57
CNOT4-212ENST00000541284 DBF4Q9UBU7 674 aaPredicted RBP11.49□□□□□ -0.57
CNOT4-212ENST00000541284 KIAA1551Q9HCM1 1747 aa11.49□□□□□ -0.57
CNOT4-212ENST00000541284 STX6O43752 255 aa11.49□□□□□ -0.57
CNOT4-212ENST00000541284 MSNP26038 577 aaKnown RBP11.49□□□□□ -0.57
CNOT4-212ENST00000541284 MCM5P33992 734 aa11.49□□□□□ -0.57
CNOT4-212ENST00000541284 KSR2Q6VAB6 950 aa11.49□□□□□ -0.57
CNOT4-212ENST00000541284 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.49□□□□□ -0.57
CNOT4-212ENST00000541284 TAF6LQ9Y6J9 622 aa11.49□□□□□ -0.57
CNOT4-212ENST00000541284 MED23Q9ULK4 1368 aa11.49□□□□□ -0.57
CNOT4-212ENST00000541284 ECHDC1Q9NTX5 307 aa11.48□□□□□ -0.57
CNOT4-212ENST00000541284 TLR7Q9NYK1 1049 aaKnown RBP11.48□□□□□ -0.57
CNOT4-212ENST00000541284 NHSQ6T4R5 1651 aa11.48□□□□□ -0.57
CNOT4-212ENST00000541284 NPHP3Q7Z494 1330 aa11.48□□□□□ -0.57
CNOT4-212ENST00000541284 CASTP20810 708 aaKnown RBP11.48□□□□□ -0.57
CNOT4-212ENST00000541284 AMOTQ4VCS5 1084 aa11.48□□□□□ -0.57
CNOT4-212ENST00000541284 HSP90AB4PQ58FF6 505 aa11.48□□□□□ -0.57
CNOT4-212ENST00000541284 VPS53Q5VIR6 699 aa11.48□□□□□ -0.57
CNOT4-212ENST00000541284 EAF2Q96CJ1 260 aaPredicted RBP11.48□□□□□ -0.57
CNOT4-212ENST00000541284 MYH15Q9Y2K3 1946 aa11.48□□□□□ -0.57
CNOT4-212ENST00000541284 AP5Z1O43299 807 aa11.48□□□□□ -0.57
CNOT4-212ENST00000541284 IGKV5-2P06315 115 aa11.48□□□□□ -0.57
CNOT4-212ENST00000541284 CCDC171Q6TFL3 1326 aa11.48□□□□□ -0.57
CNOT4-212ENST00000541284 ME3Q16798 604 aa11.47□□□□□ -0.57
CNOT4-212ENST00000541284 ANKRD24Q8TF21 1146 aa11.47□□□□□ -0.57
CNOT4-212ENST00000541284 MAP4K1Q92918 833 aa11.47□□□□□ -0.57
CNOT4-212ENST00000541284 FAM227BQ96M60 508 aa11.47□□□□□ -0.57
CNOT4-212ENST00000541284 CCDC39Q9UFE4 941 aa11.47□□□□□ -0.57
CNOT4-212ENST00000541284 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.47□□□□□ -0.57
CNOT4-212ENST00000541284 CCDC183Q5T5S1 534 aa11.47□□□□□ -0.57
CNOT4-212ENST00000541284 CADPS2Q86UW7 1296 aa11.47□□□□□ -0.57
CNOT4-212ENST00000541284 UBE2HP62256 183 aa11.46□□□□□ -0.57
CNOT4-212ENST00000541284 PLEKHO1Q53GL0 409 aaPredicted RBP11.46□□□□□ -0.57
CNOT4-212ENST00000541284 PRPF40BQ6NWY9 871 aaKnown RBP11.46□□□□□ -0.57
CNOT4-212ENST00000541284 BICC1Q9H694 974 aaKnown RBP11.46□□□□□ -0.57
CNOT4-212ENST00000541284 TPCN1Q9ULQ1 816 aa11.46□□□□□ -0.57
CNOT4-212ENST00000541284 AKAP11Q9UKA4 1901 aa11.46□□□□□ -0.57
CNOT4-212ENST00000541284 GJB2P29033 226 aa11.46□□□□□ -0.58
CNOT4-212ENST00000541284 TEFQ10587 303 aa11.46□□□□□ -0.58
CNOT4-212ENST00000541284 CCDC83Q8IWF9 413 aa11.46□□□□□ -0.58
CNOT4-212ENST00000541284 JAKMIP1Q96N16 626 aaKnown RBP11.46□□□□□ -0.58
CNOT4-212ENST00000541284 A0A0D9SFI3 127 aa11.45□□□□□ -0.58
CNOT4-212ENST00000541284 GRM8O00222 908 aa11.45□□□□□ -0.58
CNOT4-212ENST00000541284 PSME1Q06323 249 aa11.45□□□□□ -0.58
CNOT4-212ENST00000541284 NMIQ13287 307 aaPredicted RBP11.45□□□□□ -0.58
CNOT4-212ENST00000541284 HSP90AA2PQ14568 343 aaPredicted RBP11.45□□□□□ -0.58
CNOT4-212ENST00000541284 UVSSAQ2YD98 709 aa11.45□□□□□ -0.58
CNOT4-212ENST00000541284 CREB3L3Q68CJ9 461 aa11.45□□□□□ -0.58
CNOT4-212ENST00000541284 C14orf37Q86TY3 774 aa11.45□□□□□ -0.58
CNOT4-212ENST00000541284 PROSER2Q86WR7 435 aaPredicted RBP11.45□□□□□ -0.58
CNOT4-212ENST00000541284 CLASRPQ8N2M8 674 aaKnown RBP11.45□□□□□ -0.58
CNOT4-212ENST00000541284 LINS1Q8NG48 757 aa11.45□□□□□ -0.58
CNOT4-212ENST00000541284 EVI5LQ96CN4 794 aa11.45□□□□□ -0.58
CNOT4-212ENST00000541284 RBM8AQ9Y5S9 174 aaKnown RBP11.45□□□□□ -0.58
CNOT4-212ENST00000541284 DNM1Q05193 864 aaKnown RBP11.45□□□□□ -0.58
CNOT4-212ENST00000541284 EPHA10Q5JZY3 1008 aa11.45□□□□□ -0.58
CNOT4-212ENST00000541284 SYAP1Q96A49 352 aaPredicted RBP11.45□□□□□ -0.58
CNOT4-212ENST00000541284 PDRG1Q9NUG6 133 aa11.45□□□□□ -0.58
CNOT4-212ENST00000541284 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.45□□□□□ -0.58
CNOT4-212ENST00000541284 MYH14Q7Z406 1995 aaKnown RBP11.45□□□□□ -0.58
CNOT4-212ENST00000541284 PHKG2P15735 406 aa11.44□□□□□ -0.58
CNOT4-212ENST00000541284 DDX54Q8TDD1 881 aaKnown RBP11.44□□□□□ -0.58
CNOT4-212ENST00000541284 R3HCC1Q9Y3T6 440 aaKnown RBP11.44□□□□□ -0.58
CNOT4-212ENST00000541284 C4AP0C0L4 1744 aa11.44□□□□□ -0.58
CNOT4-212ENST00000541284 C4BP0C0L5 1744 aa11.44□□□□□ -0.58
CNOT4-212ENST00000541284 SLC27A2O14975 620 aa11.44□□□□□ -0.58
CNOT4-212ENST00000541284 AACSQ86V21 672 aa11.44□□□□□ -0.58
CNOT4-212ENST00000541284 DIAPH3Q9NSV4 1193 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms