RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 TNFRSF10BO14763 440 aa11.7□□□□□ -0.54
YBX3-210ENST00000540975 GOLGA6L1Q8N7Z2 621 aa11.7□□□□□ -0.54
YBX3-210ENST00000540975 LRRC4BQ9NT99 713 aa11.7□□□□□ -0.54
YBX3-210ENST00000540975 GGA1Q9UJY5 639 aa11.7□□□□□ -0.54
YBX3-210ENST00000540975 GDF2Q9UK05 429 aaPredicted RBP11.7□□□□□ -0.54
YBX3-210ENST00000540975 FAM181BA6NEQ2 426 aa11.69□□□□□ -0.54
YBX3-210ENST00000540975 OIP5O43482 229 aa11.69□□□□□ -0.54
YBX3-210ENST00000540975 SPEM2Q0P670 501 aa11.69□□□□□ -0.54
YBX3-210ENST00000540975 FAM26DQ5JW98 314 aa11.69□□□□□ -0.54
YBX3-210ENST00000540975 ZNF468Q5VIY5 522 aaPredicted RBP11.69□□□□□ -0.54
YBX3-210ENST00000540975 C1orf229Q6ZS94 237 aaPredicted RBP11.69□□□□□ -0.54
YBX3-210ENST00000540975 TREML1Q86YW5 311 aa11.69□□□□□ -0.54
YBX3-210ENST00000540975 ETFBKMTQ8IXQ9 262 aa11.69□□□□□ -0.54
YBX3-210ENST00000540975 AVENQ9NQS1 362 aaPredicted RBP11.69□□□□□ -0.54
YBX3-210ENST00000540975 DNMT3AQ9Y6K1 912 aaPredicted RBP11.69□□□□□ -0.54
YBX3-210ENST00000540975 PCBP4P57723 403 aaKnown RBP11.68□□□□□ -0.54
YBX3-210ENST00000540975 MAP3K10Q02779 954 aa11.68□□□□□ -0.54
YBX3-210ENST00000540975 GALNT6Q8NCL4 622 aa11.68□□□□□ -0.54
YBX3-210ENST00000540975 STIM2Q9P246 746 aa11.68□□□□□ -0.54
YBX3-210ENST00000540975 NEURL1BA8MQ27 555 aa11.67□□□□□ -0.54
YBX3-210ENST00000540975 GRNP28799 593 aaKnown RBP11.67□□□□□ -0.54
YBX3-210ENST00000540975 ARSDP51689 593 aa11.67□□□□□ -0.54
YBX3-210ENST00000540975 ADH6P28332 368 aa11.66□□□□□ -0.54
YBX3-210ENST00000540975 SYT9Q86SS6 491 aa11.66□□□□□ -0.54
YBX3-210ENST00000540975 GTF3C2Q8WUA4 911 aaPredicted RBP11.66□□□□□ -0.54
YBX3-210ENST00000540975 GSX2Q9BZM3 304 aa11.66□□□□□ -0.54
YBX3-210ENST00000540975 ENAMQ9NRM1 1142 aa11.66□□□□□ -0.54
YBX3-210ENST00000540975 ADAMTS8Q9UP79 889 aa11.66□□□□□ -0.54
YBX3-210ENST00000540975 EPB42P16452 691 aa11.65□□□□□ -0.54
YBX3-210ENST00000540975 EDARADDQ8WWZ3 215 aa11.65□□□□□ -0.54
YBX3-210ENST00000540975 RTCBQ9Y3I0 505 aaKnown RBP11.65□□□□□ -0.54
YBX3-210ENST00000540975 ZBTB39O15060 712 aa11.64□□□□□ -0.55
YBX3-210ENST00000540975 B4GALNT3Q6L9W6 998 aa11.64□□□□□ -0.55
YBX3-210ENST00000540975 SLCO4C1Q6ZQN7 724 aa11.64□□□□□ -0.55
YBX3-210ENST00000540975 RAB44Q7Z6P3 723 aaPredicted RBP11.64□□□□□ -0.55
YBX3-210ENST00000540975 C11orf16Q9NQ32 467 aa11.64□□□□□ -0.55
YBX3-210ENST00000540975 USP20Q9Y2K6 914 aa11.64□□□□□ -0.55
YBX3-210ENST00000540975 CCINQ13939 588 aa11.63□□□□□ -0.55
YBX3-210ENST00000540975 FCHSD1Q86WN1 690 aa11.63□□□□□ -0.55
YBX3-210ENST00000540975 HELQQ8TDG4 1101 aa11.63□□□□□ -0.55
YBX3-210ENST00000540975 SHISA8B8ZZ34 492 aa11.62□□□□□ -0.55
YBX3-210ENST00000540975 SIN3BO75182 1162 aa11.62□□□□□ -0.55
YBX3-210ENST00000540975 EPXP11678 715 aa11.62□□□□□ -0.55
YBX3-210ENST00000540975 NEUROD1Q13562 356 aa11.62□□□□□ -0.55
YBX3-210ENST00000540975 RGL4Q8IZJ4 473 aa11.62□□□□□ -0.55
YBX3-210ENST00000540975 BHMTQ93088 406 aa11.62□□□□□ -0.55
YBX3-210ENST00000540975 EFCC1Q9HA90 598 aa11.62□□□□□ -0.55
YBX3-210ENST00000540975 MTMR7Q9Y216 660 aa11.62□□□□□ -0.55
YBX3-210ENST00000540975 ARID4AP29374 1257 aaPredicted RBP11.61□□□□□ -0.55
YBX3-210ENST00000540975 CMTR1Q8N1G2 835 aaKnown RBP11.61□□□□□ -0.55
YBX3-210ENST00000540975 NEDD1Q8NHV4 660 aa11.61□□□□□ -0.55
YBX3-210ENST00000540975 ZAP70P43403 619 aa11.6□□□□□ -0.55
YBX3-210ENST00000540975 ABTB2Q8N961 1025 aa11.6□□□□□ -0.55
YBX3-210ENST00000540975 BTBD6Q96KE9 485 aa11.6□□□□□ -0.55
YBX3-210ENST00000540975 MTMR3Q13615 1198 aa11.59□□□□□ -0.55
YBX3-210ENST00000540975 KCNMB2Q9Y691 235 aa11.59□□□□□ -0.55
YBX3-210ENST00000540975 EGFRP00533 1210 aa11.58□□□□□ -0.56
YBX3-210ENST00000540975 TARSP26639 723 aaKnown RBP11.58□□□□□ -0.56
YBX3-210ENST00000540975 PIK3R5Q8WYR1 880 aa11.58□□□□□ -0.56
YBX3-210ENST00000540975 PNMA5Q96PV4 448 aa11.58□□□□□ -0.56
YBX3-210ENST00000540975 MDFIQ99750 246 aa11.58□□□□□ -0.56
YBX3-210ENST00000540975 FAM13BQ9NYF5 915 aa11.58□□□□□ -0.56
YBX3-210ENST00000540975 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.58□□□□□ -0.56
YBX3-210ENST00000540975 ADARB2-AS1A8MUL3 147 aa11.57□□□□□ -0.56
YBX3-210ENST00000540975 SASH3O75995 380 aa11.57□□□□□ -0.56
YBX3-210ENST00000540975 MARSP56192 900 aaKnown RBP11.57□□□□□ -0.56
YBX3-210ENST00000540975 FKBP4Q02790 459 aaKnown RBP eCLIP11.57□□□□□ -0.56
YBX3-210ENST00000540975 TNFRSF25Q93038 417 aa11.57□□□□□ -0.56
YBX3-210ENST00000540975 ELOA3CA0A087WX78 387 aaPredicted RBP11.56□□□□□ -0.56
YBX3-210ENST00000540975 ELOA3DA6NLF2 546 aaPredicted RBP11.56□□□□□ -0.56
YBX3-210ENST00000540975 XYLBO75191 536 aa11.56□□□□□ -0.56
YBX3-210ENST00000540975 ABL1P00519 1130 aa11.56□□□□□ -0.56
YBX3-210ENST00000540975 NPR3P17342 541 aa11.56□□□□□ -0.56
YBX3-210ENST00000540975 ELOA3BQ3SY89 546 aa11.56□□□□□ -0.56
YBX3-210ENST00000540975 NOM1Q5C9Z4 860 aaKnown RBP11.56□□□□□ -0.56
YBX3-210ENST00000540975 ELOA3Q8NG57 546 aa11.56□□□□□ -0.56
YBX3-210ENST00000540975 ZFATQ9P243 1243 aa11.56□□□□□ -0.56
YBX3-210ENST00000540975 NFKB1P19838 968 aa11.55□□□□□ -0.56
YBX3-210ENST00000540975 ALAS2P22557 587 aa11.55□□□□□ -0.56
YBX3-210ENST00000540975 MPSTP25325 297 aa11.55□□□□□ -0.56
YBX3-210ENST00000540975 KRT25Q7Z3Z0 450 aa11.55□□□□□ -0.56
YBX3-210ENST00000540975 ATCAYQ86WG3 371 aa11.55□□□□□ -0.56
YBX3-210ENST00000540975 GPR152Q8TDT2 470 aa11.55□□□□□ -0.56
YBX3-210ENST00000540975 ANO2Q9NQ90 1003 aa11.55□□□□□ -0.56
YBX3-210ENST00000540975 SF3B2Q13435 895 aaKnown RBP11.54□□□□□ -0.56
YBX3-210ENST00000540975 TXNDC2Q86VQ3 553 aa11.54□□□□□ -0.56
YBX3-210ENST00000540975 IGFLR1Q9H665 355 aa11.54□□□□□ -0.56
YBX3-210ENST00000540975 MAP3K6O95382 1288 aa11.53□□□□□ -0.56
YBX3-210ENST00000540975 AMPD1P23109 780 aa11.53□□□□□ -0.56
YBX3-210ENST00000540975 EIF1AXP47813 144 aaKnown RBP11.53□□□□□ -0.56
YBX3-210ENST00000540975 CHSY3Q70JA7 882 aa11.53□□□□□ -0.56
YBX3-210ENST00000540975 FAM13AO94988 1023 aa11.52□□□□□ -0.57
YBX3-210ENST00000540975 BRD1O95696 1058 aa11.52□□□□□ -0.57
YBX3-210ENST00000540975 HOXB4P17483 251 aaPredicted RBP11.52□□□□□ -0.57
YBX3-210ENST00000540975 SERPINB4P48594 390 aa11.52□□□□□ -0.57
YBX3-210ENST00000540975 SNRPNP63162 240 aaKnown RBP11.52□□□□□ -0.57
YBX3-210ENST00000540975 ZNF211Q13398 564 aaPredicted RBP11.52□□□□□ -0.57
YBX3-210ENST00000540975 TRIP4Q15650 581 aaPredicted RBP11.52□□□□□ -0.57
YBX3-210ENST00000540975 RRAGCQ9HB90 399 aa11.52□□□□□ -0.57
YBX3-210ENST00000540975 EGFL7Q9UHF1 273 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms