RNA–Protein interactions for RNA: ENST00000540898.1

FOXO3-203, Transcript of forkhead box O3, humanhuman

TSL 1 (best) BASIC

Gene FOXO3, Length 2,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXO3-203ENST00000540898 CHMP3Q9Y3E7 222 aa12.53□□□□□ -0.4
FOXO3-203ENST00000540898 NDUFB9Q9Y6M9 179 aa12.53□□□□□ -0.4
FOXO3-203ENST00000540898 LMBR1LQ6UX01 489 aa12.53□□□□□ -0.4
FOXO3-203ENST00000540898 EAF2Q96CJ1 260 aaPredicted RBP12.53□□□□□ -0.4
FOXO3-203ENST00000540898 ZNF594Q96JF6 807 aaPredicted RBP12.53□□□□□ -0.4
FOXO3-203ENST00000540898 OSBPL3Q9H4L5 887 aa12.53□□□□□ -0.4
FOXO3-203ENST00000540898 ITPK1Q13572 414 aa12.52□□□□□ -0.4
FOXO3-203ENST00000540898 TJP1Q07157 1748 aa12.52□□□□□ -0.41
FOXO3-203ENST00000540898 RFX5P48382 616 aaPredicted RBP12.52□□□□□ -0.41
FOXO3-203ENST00000540898 FOXO4P98177 505 aa12.52□□□□□ -0.41
FOXO3-203ENST00000540898 KIF1BPQ96EK5 621 aa12.52□□□□□ -0.41
FOXO3-203ENST00000540898 FAM89AQ96GI7 184 aa12.52□□□□□ -0.41
FOXO3-203ENST00000540898 CHGBP05060 677 aa12.51□□□□□ -0.41
FOXO3-203ENST00000540898 PTPN12Q05209 780 aaKnown RBP12.51□□□□□ -0.41
FOXO3-203ENST00000540898 AACSQ86V21 672 aa12.51□□□□□ -0.41
FOXO3-203ENST00000540898 EDC3Q96F86 508 aaKnown RBP12.5□□□□□ -0.41
FOXO3-203ENST00000540898 STAP2Q9UGK3 403 aa12.5□□□□□ -0.41
FOXO3-203ENST00000540898 FAM177BA6PVY3 158 aa12.5□□□□□ -0.41
FOXO3-203ENST00000540898 RAB11FIP3O75154 756 aa12.5□□□□□ -0.41
FOXO3-203ENST00000540898 RBM25P49756 843 aaKnown RBP12.5□□□□□ -0.41
FOXO3-203ENST00000540898 CWC25Q9NXE8 425 aaPredicted RBP12.5□□□□□ -0.41
FOXO3-203ENST00000540898 H7C1W4 665 aa12.49□□□□□ -0.41
FOXO3-203ENST00000540898 CERKQ8TCT0 537 aa12.49□□□□□ -0.41
FOXO3-203ENST00000540898 USP26Q9BXU7 913 aa12.49□□□□□ -0.41
FOXO3-203ENST00000540898 FOXD4L1Q9NU39 408 aa12.49□□□□□ -0.41
FOXO3-203ENST00000540898 MYH14Q7Z406 1995 aaKnown RBP12.49□□□□□ -0.41
FOXO3-203ENST00000540898 JCADQ9P266 1359 aa12.49□□□□□ -0.41
FOXO3-203ENST00000540898 ERBB4Q15303 1308 aa12.49□□□□□ -0.41
FOXO3-203ENST00000540898 STARD3NLO95772 234 aa12.49□□□□□ -0.41
FOXO3-203ENST00000540898 ATP6V1AP38606 617 aa12.49□□□□□ -0.41
FOXO3-203ENST00000540898 TFCP2Q12800 502 aa12.49□□□□□ -0.41
FOXO3-203ENST00000540898 PUS3Q9BZE2 481 aaKnown RBP12.49□□□□□ -0.41
FOXO3-203ENST00000540898 USP21Q9UK80 565 aa12.49□□□□□ -0.41
FOXO3-203ENST00000540898 CHMLP26374 656 aa12.48□□□□□ -0.41
FOXO3-203ENST00000540898 CLCN1P35523 988 aa12.48□□□□□ -0.41
FOXO3-203ENST00000540898 LRRC24Q50LG9 513 aa12.48□□□□□ -0.41
FOXO3-203ENST00000540898 G3BP1Q13283 466 aaKnown RBP eCLIP12.48□□□□□ -0.41
FOXO3-203ENST00000540898 TCIRG1Q13488 830 aa12.48□□□□□ -0.41
FOXO3-203ENST00000540898 RABL6Q3YEC7 729 aaPredicted RBP12.48□□□□□ -0.41
FOXO3-203ENST00000540898 INTS5Q6P9B9 1019 aaKnown RBP12.48□□□□□ -0.41
FOXO3-203ENST00000540898 AEBP2Q6ZN18 517 aaPredicted RBP12.48□□□□□ -0.41
FOXO3-203ENST00000540898 ISCA1Q9BUE6 129 aa12.48□□□□□ -0.41
FOXO3-203ENST00000540898 PALD1Q9ULE6 856 aa12.48□□□□□ -0.41
FOXO3-203ENST00000540898 LOC102724428A0A0B4J2F2 783 aa12.47□□□□□ -0.41
FOXO3-203ENST00000540898 SIK1P57059 783 aa12.47□□□□□ -0.41
FOXO3-203ENST00000540898 L1TD1Q5T7N2 865 aaKnown RBP12.47□□□□□ -0.41
FOXO3-203ENST00000540898 THRAP3Q9Y2W1 955 aaKnown RBP12.47□□□□□ -0.41
FOXO3-203ENST00000540898 NWD2Q9ULI1 1742 aa12.47□□□□□ -0.41
FOXO3-203ENST00000540898 BARGINQ6ZT62 677 aa12.47□□□□□ -0.41
FOXO3-203ENST00000540898 CLASRPQ8N2M8 674 aaKnown RBP12.47□□□□□ -0.41
FOXO3-203ENST00000540898 UBN2Q6ZU65 1347 aa12.46□□□□□ -0.41
FOXO3-203ENST00000540898 IFIT2P09913 472 aaKnown RBP12.46□□□□□ -0.41
FOXO3-203ENST00000540898 CRKLP46109 303 aaKnown RBP12.46□□□□□ -0.41
FOXO3-203ENST00000540898 VPS72Q15906 364 aa12.46□□□□□ -0.41
FOXO3-203ENST00000540898 ESYT1Q9BSJ8 1104 aa12.46□□□□□ -0.41
FOXO3-203ENST00000540898 BOLA2Q9H3K6 86 aa12.46□□□□□ -0.41
FOXO3-203ENST00000540898 MAP3K15Q6ZN16 1313 aa12.46□□□□□ -0.41
FOXO3-203ENST00000540898 SLFNL1Q499Z3 407 aa12.46□□□□□ -0.42
FOXO3-203ENST00000540898 KIF6Q6ZMV9 814 aa12.46□□□□□ -0.42
FOXO3-203ENST00000540898 FNBP4Q8N3X1 1017 aaPredicted RBP12.46□□□□□ -0.42
FOXO3-203ENST00000540898 DBNLQ9UJU6 430 aaKnown RBP12.46□□□□□ -0.42
FOXO3-203ENST00000540898 PALLDQ8WX93 1383 aa12.46□□□□□ -0.42
FOXO3-203ENST00000540898 ATG9AQ7Z3C6 839 aa12.45□□□□□ -0.42
FOXO3-203ENST00000540898 AMIGO3Q86WK7 504 aa12.45□□□□□ -0.42
FOXO3-203ENST00000540898 CCDC191Q8NCU4 936 aa12.45□□□□□ -0.42
FOXO3-203ENST00000540898 DZIP3Q86Y13 1208 aaKnown RBP12.45□□□□□ -0.42
FOXO3-203ENST00000540898 DBNDD2Q9BQY9 259 aa12.45□□□□□ -0.42
FOXO3-203ENST00000540898 ANO2Q9NQ90 1003 aa12.45□□□□□ -0.42
FOXO3-203ENST00000540898 COPRSQ9NQ92 184 aa12.45□□□□□ -0.42
FOXO3-203ENST00000540898 ERC2O15083 957 aa12.44□□□□□ -0.42
FOXO3-203ENST00000540898 TIMM10P62072 90 aa12.44□□□□□ -0.42
FOXO3-203ENST00000540898 CWC27Q6UX04 472 aaKnown RBP12.44□□□□□ -0.42
FOXO3-203ENST00000540898 GIGYF2Q6Y7W6 1299 aaKnown RBP12.44□□□□□ -0.42
FOXO3-203ENST00000540898 NLRP10Q86W26 655 aa12.44□□□□□ -0.42
FOXO3-203ENST00000540898 CDCA7Q9BWT1 371 aaPredicted RBP12.44□□□□□ -0.42
FOXO3-203ENST00000540898 AK9Q5TCS8 1911 aa12.44□□□□□ -0.42
FOXO3-203ENST00000540898 HSP90AB4PQ58FF6 505 aa12.44□□□□□ -0.42
FOXO3-203ENST00000540898 MEX3CQ5U5Q3 659 aaKnown RBP12.44□□□□□ -0.42
FOXO3-203ENST00000540898 LINC00116Q8NCU8 138 aa12.44□□□□□ -0.42
FOXO3-203ENST00000540898 ANTXR1Q9H6X2 564 aa12.44□□□□□ -0.42
FOXO3-203ENST00000540898 ECHDC1Q9NTX5 307 aa12.44□□□□□ -0.42
FOXO3-203ENST00000540898 COL9A3Q14050 684 aaPredicted RBP12.43□□□□□ -0.42
FOXO3-203ENST00000540898 TEX13AQ9BXU3 409 aaPredicted RBP12.43□□□□□ -0.42
FOXO3-203ENST00000540898 AFF2P51816 1311 aa12.43□□□□□ -0.42
FOXO3-203ENST00000540898 NUP98P52948 1817 aa12.43□□□□□ -0.42
FOXO3-203ENST00000540898 DTNBO60941 627 aa12.43□□□□□ -0.42
FOXO3-203ENST00000540898 XRCC6P12956 609 aaKnown RBP eCLIP12.43□□□□□ -0.42
FOXO3-203ENST00000540898 TNNI3KQ59H18 835 aa12.43□□□□□ -0.42
FOXO3-203ENST00000540898 CCDC87Q9NVE4 849 aa12.43□□□□□ -0.42
FOXO3-203ENST00000540898 FPGT-TNNI3KV9GXZ4 949 aa12.43□□□□□ -0.42
FOXO3-203ENST00000540898 EIF5P55010 431 aaKnown RBP12.42□□□□□ -0.42
FOXO3-203ENST00000540898 BECN1Q14457 450 aa12.42□□□□□ -0.42
FOXO3-203ENST00000540898 FAM227BQ96M60 508 aa12.42□□□□□ -0.42
FOXO3-203ENST00000540898 HCLS1P14317 486 aaPredicted RBP12.42□□□□□ -0.42
FOXO3-203ENST00000540898 GREM2Q9H772 168 aa12.42□□□□□ -0.42
FOXO3-203ENST00000540898 USP42Q9H9J4 1324 aaKnown RBP12.42□□□□□ -0.42
FOXO3-203ENST00000540898 SNAP23O00161 211 aa12.41□□□□□ -0.42
FOXO3-203ENST00000540898 NOL8Q76FK4 1167 aaKnown RBP12.41□□□□□ -0.42
FOXO3-203ENST00000540898 ERC1Q8IUD2 1116 aa12.41□□□□□ -0.42
FOXO3-203ENST00000540898 NEUROD6Q96NK8 337 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms