RNA–Protein interactions for RNA: ENST00000540828.6

PTMS-205, Transcript of parathymosin, humanhuman

TSL 1 (best)

Gene PTMS, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-205ENST00000540828 ANKRD13DQ6ZTN6 518 aa27.35■■□□□ 1.97
PTMS-205ENST00000540828 HOXA10P31260 410 aaPredicted RBP27.34■■□□□ 1.97
PTMS-205ENST00000540828 NLRP10Q86W26 655 aa27.34■■□□□ 1.97
PTMS-205ENST00000540828 ARFGEF2Q9Y6D5 1785 aa27.34■■□□□ 1.97
PTMS-205ENST00000540828 FER1L6Q2WGJ9 1857 aa27.34■■□□□ 1.97
PTMS-205ENST00000540828 TAOK3Q9H2K8 898 aa27.33■■□□□ 1.97
PTMS-205ENST00000540828 NMRK2Q9NPI5 230 aa27.33■■□□□ 1.97
PTMS-205ENST00000540828 CHMP4AQ9BY43 222 aa27.32■■□□□ 1.96
PTMS-205ENST00000540828 TNRC6CQ9HCJ0 1690 aaKnown RBP27.32■■□□□ 1.96
PTMS-205ENST00000540828 IL16Q14005 1332 aa27.32■■□□□ 1.96
PTMS-205ENST00000540828 RNF123Q5XPI4 1314 aa27.32■■□□□ 1.96
PTMS-205ENST00000540828 KDM2BQ8NHM5 1336 aa27.32■■□□□ 1.96
PTMS-205ENST00000540828 CCDC93Q567U6 631 aa27.31■■□□□ 1.96
PTMS-205ENST00000540828 CACNA1SQ13698 1873 aa27.3■■□□□ 1.96
PTMS-205ENST00000540828 CCDC88AQ3V6T2 1871 aa27.3■■□□□ 1.96
PTMS-205ENST00000540828 C3orf67Q6ZVT6 689 aa27.3■■□□□ 1.96
PTMS-205ENST00000540828 TSPYL6Q8N831 410 aa27.3■■□□□ 1.96
PTMS-205ENST00000540828 RPGRQ92834 1020 aaKnown RBP27.3■■□□□ 1.96
PTMS-205ENST00000540828 TSR2Q969E8 191 aaKnown RBP27.3■■□□□ 1.96
PTMS-205ENST00000540828 NLRP3Q96P20 1036 aa27.3■■□□□ 1.96
PTMS-205ENST00000540828 CRAMP1Q96RY5 1269 aa27.29■■□□□ 1.96
PTMS-205ENST00000540828 ISCA1Q9BUE6 129 aa27.29■■□□□ 1.96
PTMS-205ENST00000540828 GLTPD2A6NH11 291 aa27.28■■□□□ 1.96
PTMS-205ENST00000540828 CCDC30Q5VVM6 783 aa27.28■■□□□ 1.96
PTMS-205ENST00000540828 RTKN2Q8IZC4 609 aa27.28■■□□□ 1.96
PTMS-205ENST00000540828 RBM17Q96I25 401 aaKnown RBP27.28■■□□□ 1.96
PTMS-205ENST00000540828 PHAXQ9H814 394 aaKnown RBP27.28■■□□□ 1.96
PTMS-205ENST00000540828 TRMT112Q9UI30 125 aaKnown RBP27.28■■□□□ 1.96
PTMS-205ENST00000540828 OLFM4Q6UX06 510 aa27.27■■□□□ 1.96
PTMS-205ENST00000540828 WDR63Q8IWG1 891 aa27.27■■□□□ 1.96
PTMS-205ENST00000540828 FAM9BQ8IZU0 186 aa27.27■■□□□ 1.96
PTMS-205ENST00000540828 ANKRD36CQ5JPF3 1778 aa27.27■■□□□ 1.96
PTMS-205ENST00000540828 FKBP4Q02790 459 aaKnown RBP eCLIP27.26■■□□□ 1.95
PTMS-205ENST00000540828 TRIM28Q13263 835 aaKnown RBP27.26■■□□□ 1.95
PTMS-205ENST00000540828 SYNE4Q8N205 404 aa27.26■■□□□ 1.95
PTMS-205ENST00000540828 RRAGCQ9HB90 399 aa27.26■■□□□ 1.95
PTMS-205ENST00000540828 SH3TC1Q8TE82 1336 aa27.25■■□□□ 1.95
PTMS-205ENST00000540828 TOMM70O94826 608 aa27.25■■□□□ 1.95
PTMS-205ENST00000540828 SALL2Q9Y467 1007 aaPredicted RBP27.25■■□□□ 1.95
PTMS-205ENST00000540828 ATP5J2-PTCD1G3V325 749 aa27.24■■□□□ 1.95
PTMS-205ENST00000540828 HCLS1P14317 486 aaPredicted RBP27.24■■□□□ 1.95
PTMS-205ENST00000540828 GOLGA2Q08379 1002 aa27.24■■□□□ 1.95
PTMS-205ENST00000540828 CC2D2BQ6DHV5 1058 aa27.24■■□□□ 1.95
PTMS-205ENST00000540828 RIC3Q7Z5B4 369 aa27.24■■□□□ 1.95
PTMS-205ENST00000540828 DICER1Q9UPY3 1922 aaKnown RBP27.23■■□□□ 1.95
PTMS-205ENST00000540828 DPY19L2Q6NUT2 758 aa27.22■■□□□ 1.95
PTMS-205ENST00000540828 TWISTNBQ3B726 338 aaPredicted RBP27.21■■□□□ 1.95
PTMS-205ENST00000540828 GRIPAP1Q4V328 841 aa27.2■■□□□ 1.94
PTMS-205ENST00000540828 SNED1Q8TER0 1413 aa27.2■■□□□ 1.94
PTMS-205ENST00000540828 ZNF428Q96B54 188 aa27.2■■□□□ 1.94
PTMS-205ENST00000540828 ZNF277Q9NRM2 450 aaPredicted RBP27.2■■□□□ 1.94
PTMS-205ENST00000540828 TIAM2Q8IVF5 1701 aa27.19■■□□□ 1.94
PTMS-205ENST00000540828 C16orf71Q8IYS4 520 aaPredicted RBP27.19■■□□□ 1.94
PTMS-205ENST00000540828 RBM46Q8TBY0 533 aaKnown RBP27.19■■□□□ 1.94
PTMS-205ENST00000540828 FAM89AQ96GI7 184 aa27.19■■□□□ 1.94
PTMS-205ENST00000540828 PSMD1Q99460 953 aa27.19■■□□□ 1.94
PTMS-205ENST00000540828 FANCIQ9NVI1 1328 aa27.18■■□□□ 1.94
PTMS-205ENST00000540828 PPEF1O14829 653 aaPredicted RBP27.18■■□□□ 1.94
PTMS-205ENST00000540828 VEGFAP15692 232 aaPredicted RBP27.18■■□□□ 1.94
PTMS-205ENST00000540828 ABCC4O15439 1325 aa27.17■■□□□ 1.94
PTMS-205ENST00000540828 BBOX1O75936 387 aa27.17■■□□□ 1.94
PTMS-205ENST00000540828 DDX58O95786 925 aaKnown RBP27.17■■□□□ 1.94
PTMS-205ENST00000540828 HSPA6P17066 643 aa27.17■■□□□ 1.94
PTMS-205ENST00000540828 STK31Q9BXU1 1019 aa27.17■■□□□ 1.94
PTMS-205ENST00000540828 POTECB2RU33 542 aa27.16■■□□□ 1.94
PTMS-205ENST00000540828 TCERG1O14776 1098 aaKnown RBP27.16■■□□□ 1.94
PTMS-205ENST00000540828 MYD88Q99836 296 aa27.16■■□□□ 1.94
PTMS-205ENST00000540828 METTL22Q9BUU2 404 aaPredicted RBP27.16■■□□□ 1.94
PTMS-205ENST00000540828 ATP6V0A2Q9Y487 856 aa27.16■■□□□ 1.94
PTMS-205ENST00000540828 IARSP41252 1262 aaKnown RBP27.15■■□□□ 1.94
PTMS-205ENST00000540828 DDX46Q7L014 1031 aaKnown RBP27.15■■□□□ 1.94
PTMS-205ENST00000540828 SF3B3Q15393 1217 aaKnown RBP27.14■■□□□ 1.94
PTMS-205ENST00000540828 KSR2Q6VAB6 950 aa27.14■■□□□ 1.94
PTMS-205ENST00000540828 SLC51AQ86UW1 340 aa27.14■■□□□ 1.94
PTMS-205ENST00000540828 CCDC191Q8NCU4 936 aa27.14■■□□□ 1.94
PTMS-205ENST00000540828 SPINK5Q9NQ38 1064 aaPredicted RBP27.14■■□□□ 1.94
PTMS-205ENST00000540828 VAMP4O75379 141 aa27.13■■□□□ 1.93
PTMS-205ENST00000540828 DDNO94850 711 aaPredicted RBP27.13■■□□□ 1.93
PTMS-205ENST00000540828 SLC4A2P04920 1241 aa27.13■■□□□ 1.93
PTMS-205ENST00000540828 ZBTB38Q8NAP3 1195 aaPredicted RBP27.13■■□□□ 1.93
PTMS-205ENST00000540828 MAP3K2Q9Y2U5 619 aa27.13■■□□□ 1.93
PTMS-205ENST00000540828 LAMB2P55268 1798 aa27.12■■□□□ 1.93
PTMS-205ENST00000540828 PI4KAP2A4QPH2 592 aa27.12■■□□□ 1.93
PTMS-205ENST00000540828 IRS4O14654 1257 aaPredicted RBP27.12■■□□□ 1.93
PTMS-205ENST00000540828 EXOSC9Q06265 439 aaKnown RBP27.12■■□□□ 1.93
PTMS-205ENST00000540828 GRAPQ13588 217 aa27.12■■□□□ 1.93
PTMS-205ENST00000540828 RTL5Q5HYW3 569 aaPredicted RBP27.12■■□□□ 1.93
PTMS-205ENST00000540828 G2E3Q7L622 706 aa27.12■■□□□ 1.93
PTMS-205ENST00000540828 SP8Q8IXZ3 490 aa27.12■■□□□ 1.93
PTMS-205ENST00000540828 PI4KAP1Q8N8J0 262 aa27.12■■□□□ 1.93
PTMS-205ENST00000540828 GRAPLQ8TC17 118 aaPredicted RBP27.12■■□□□ 1.93
PTMS-205ENST00000540828 TMX4Q9H1E5 349 aaPredicted RBP27.12■■□□□ 1.93
PTMS-205ENST00000540828 FSTL1Q12841 308 aa27.11■■□□□ 1.93
PTMS-205ENST00000540828 WDR90Q96KV7 1748 aa27.1■■□□□ 1.93
PTMS-205ENST00000540828 FZD9O00144 591 aa27.1■■□□□ 1.93
PTMS-205ENST00000540828 PCCAP05165 728 aaPredicted RBP27.1■■□□□ 1.93
PTMS-205ENST00000540828 CWC25Q9NXE8 425 aaPredicted RBP27.1■■□□□ 1.93
PTMS-205ENST00000540828 MYH16Q9H6N6 1097 aa27.09■■□□□ 1.93
PTMS-205ENST00000540828 DDX60Q8IY21 1712 aaKnown RBP27.09■■□□□ 1.93
PTMS-205ENST00000540828 HSP90B1P14625 803 aaKnown RBP27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms