RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 SYNE4Q8N205 404 aa30.33■■■□□ 2.45
TTC3-225ENST00000540756 FAM89AQ96GI7 184 aa30.33■■■□□ 2.45
TTC3-225ENST00000540756 SIL1Q9H173 461 aa30.33■■■□□ 2.45
TTC3-225ENST00000540756 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.33■■■□□ 2.45
TTC3-225ENST00000540756 OS9Q13438 667 aaPredicted RBP30.32■■■□□ 2.44
TTC3-225ENST00000540756 LMBR1LQ6UX01 489 aa30.32■■■□□ 2.44
TTC3-225ENST00000540756 ANKRD36CQ5JPF3 1778 aa30.32■■■□□ 2.44
TTC3-225ENST00000540756 PDE1AP54750 535 aa30.32■■■□□ 2.44
TTC3-225ENST00000540756 NLRP10Q86W26 655 aa30.32■■■□□ 2.44
TTC3-225ENST00000540756 KIF1BPQ96EK5 621 aa30.32■■■□□ 2.44
TTC3-225ENST00000540756 ERVV-1B6SEH8 477 aa30.31■■■□□ 2.44
TTC3-225ENST00000540756 RFX5P48382 616 aaPredicted RBP30.31■■■□□ 2.44
TTC3-225ENST00000540756 NUTM1Q86Y26 1132 aa30.31■■■□□ 2.44
TTC3-225ENST00000540756 KRT27Q7Z3Y8 459 aa30.3■■■□□ 2.44
TTC3-225ENST00000540756 CCNL1Q9UK58 526 aaPredicted RBP30.29■■■□□ 2.44
TTC3-225ENST00000540756 UBN2Q6ZU65 1347 aa30.29■■■□□ 2.44
TTC3-225ENST00000540756 CAMTA2O94983 1202 aa30.29■■■□□ 2.44
TTC3-225ENST00000540756 HSP90AB4PQ58FF6 505 aa30.28■■■□□ 2.44
TTC3-225ENST00000540756 ZNF772Q68DY9 489 aaPredicted RBP30.28■■■□□ 2.44
TTC3-225ENST00000540756 CHMP3Q9Y3E7 222 aa30.28■■■□□ 2.44
TTC3-225ENST00000540756 LY75O60449 1722 aa30.27■■■□□ 2.44
TTC3-225ENST00000540756 SASH1O94885 1247 aa30.27■■■□□ 2.44
TTC3-225ENST00000540756 MX1P20591 662 aa30.27■■■□□ 2.44
TTC3-225ENST00000540756 PTPN12Q05209 780 aaKnown RBP30.27■■■□□ 2.44
TTC3-225ENST00000540756 HSP90AB3PQ58FF7 597 aa30.27■■■□□ 2.44
TTC3-225ENST00000540756 ZBTB38Q8NAP3 1195 aaPredicted RBP30.27■■■□□ 2.44
TTC3-225ENST00000540756 BCL11BQ9C0K0 894 aaPredicted RBP30.27■■■□□ 2.44
TTC3-225ENST00000540756 OSBPL3Q9H4L5 887 aa30.27■■■□□ 2.44
TTC3-225ENST00000540756 PCCAP05165 728 aaPredicted RBP30.26■■■□□ 2.43
TTC3-225ENST00000540756 RBM6P78332 1123 aaKnown RBP30.26■■■□□ 2.43
TTC3-225ENST00000540756 ZNF34Q8IZ26 560 aa30.26■■■□□ 2.43
TTC3-225ENST00000540756 G3BP1Q13283 466 aaKnown RBP eCLIP30.25■■■□□ 2.43
TTC3-225ENST00000540756 COPRSQ9NQ92 184 aa30.24■■■□□ 2.43
TTC3-225ENST00000540756 CNTNAP4Q9C0A0 1308 aa30.24■■■□□ 2.43
TTC3-225ENST00000540756 SDSP20132 328 aa30.23■■■□□ 2.43
TTC3-225ENST00000540756 FAM196AQ6ZSG2 479 aa30.23■■■□□ 2.43
TTC3-225ENST00000540756 AMIGO3Q86WK7 504 aa30.23■■■□□ 2.43
TTC3-225ENST00000540756 TRIM37O94972 964 aa30.23■■■□□ 2.43
TTC3-225ENST00000540756 TAF1LQ8IZX4 1826 aa30.23■■■□□ 2.43
TTC3-225ENST00000540756 CCDC85AQ96PX6 553 aaPredicted RBP30.22■■■□□ 2.43
TTC3-225ENST00000540756 TBC1D9Q6ZT07 1266 aa30.22■■■□□ 2.43
TTC3-225ENST00000540756 STAP2Q9UGK3 403 aa30.22■■■□□ 2.43
TTC3-225ENST00000540756 TRMT112Q9UI30 125 aaKnown RBP30.22■■■□□ 2.43
TTC3-225ENST00000540756 FAM177BA6PVY3 158 aa30.21■■■□□ 2.43
TTC3-225ENST00000540756 LRRC4BQ9NT99 713 aa30.21■■■□□ 2.43
TTC3-225ENST00000540756 ANP32AP39687 249 aaKnown RBP30.2■■■□□ 2.43
TTC3-225ENST00000540756 ERC1Q8IUD2 1116 aa30.2■■■□□ 2.43
TTC3-225ENST00000540756 TUBGCP6Q96RT7 1819 aa30.2■■■□□ 2.43
TTC3-225ENST00000540756 SUSD4Q5VX71 490 aa30.2■■■□□ 2.42
TTC3-225ENST00000540756 ZNF594Q96JF6 807 aaPredicted RBP30.2■■■□□ 2.42
TTC3-225ENST00000540756 GNPATO15228 680 aa30.19■■■□□ 2.42
TTC3-225ENST00000540756 MFAP1P55081 439 aaKnown RBP30.19■■■□□ 2.42
TTC3-225ENST00000540756 CLASRPQ8N2M8 674 aaKnown RBP30.19■■■□□ 2.42
TTC3-225ENST00000540756 RC3H1Q5TC82 1133 aaKnown RBP30.18■■■□□ 2.42
TTC3-225ENST00000540756 EAF2Q96CJ1 260 aaPredicted RBP30.18■■■□□ 2.42
TTC3-225ENST00000540756 RGS17Q9UGC6 210 aaPredicted RBP30.18■■■□□ 2.42
TTC3-225ENST00000540756 BCORQ6W2J9 1755 aa30.18■■■□□ 2.42
TTC3-225ENST00000540756 PLA2G12BQ9BX93 195 aa30.17■■■□□ 2.42
TTC3-225ENST00000540756 CDHR2Q9BYE9 1310 aa30.17■■■□□ 2.42
TTC3-225ENST00000540756 AACSQ86V21 672 aa30.17■■■□□ 2.42
TTC3-225ENST00000540756 IRS4O14654 1257 aaPredicted RBP30.16■■■□□ 2.42
TTC3-225ENST00000540756 RPS6KA4O75676 772 aa30.16■■■□□ 2.42
TTC3-225ENST00000540756 NIP7Q9Y221 180 aaKnown RBP eCLIP30.16■■■□□ 2.42
TTC3-225ENST00000540756 CDC45O75419 566 aa30.15■■■□□ 2.42
TTC3-225ENST00000540756 PI4K2BQ8TCG2 481 aa30.15■■■□□ 2.42
TTC3-225ENST00000540756 CCDC8Q9H0W5 538 aaPredicted RBP30.15■■■□□ 2.42
TTC3-225ENST00000540756 TFCP2Q12800 502 aa30.15■■■□□ 2.42
TTC3-225ENST00000540756 TLR7Q9NYK1 1049 aaKnown RBP30.15■■■□□ 2.42
TTC3-225ENST00000540756 SRP68Q9UHB9 627 aaKnown RBP30.15■■■□□ 2.42
TTC3-225ENST00000540756 CSF1RP07333 972 aa30.14■■■□□ 2.42
TTC3-225ENST00000540756 ATG9AQ7Z3C6 839 aa30.13■■■□□ 2.41
TTC3-225ENST00000540756 C4BP0C0L5 1744 aa30.13■■■□□ 2.41
TTC3-225ENST00000540756 MAP4K4O95819 1239 aaPredicted RBP30.13■■■□□ 2.41
TTC3-225ENST00000540756 RXRBP28702 533 aa30.13■■■□□ 2.41
TTC3-225ENST00000540756 LRRC24Q50LG9 513 aa30.13■■■□□ 2.41
TTC3-225ENST00000540756 BCL2L12Q9HB09 334 aa30.13■■■□□ 2.41
TTC3-225ENST00000540756 MYH3P11055 1940 aa30.13■■■□□ 2.41
TTC3-225ENST00000540756 IFIT2P09913 472 aaKnown RBP30.12■■■□□ 2.41
TTC3-225ENST00000540756 TTLL11Q8NHH1 800 aa30.12■■■□□ 2.41
TTC3-225ENST00000540756 PUS3Q9BZE2 481 aaKnown RBP30.12■■■□□ 2.41
TTC3-225ENST00000540756 USPL1Q5W0Q7 1092 aa30.12■■■□□ 2.41
TTC3-225ENST00000540756 HCLS1P14317 486 aaPredicted RBP30.11■■■□□ 2.41
TTC3-225ENST00000540756 GREM2Q9H772 168 aa30.11■■■□□ 2.41
TTC3-225ENST00000540756 RTCBQ9Y3I0 505 aaKnown RBP30.11■■■□□ 2.41
TTC3-225ENST00000540756 MSH5O43196 834 aa30.1■■■□□ 2.41
TTC3-225ENST00000540756 CTSWP56202 376 aa30.1■■■□□ 2.41
TTC3-225ENST00000540756 CCDC57Q2TAC2 916 aa30.1■■■□□ 2.41
TTC3-225ENST00000540756 UTP14AQ9BVJ6 771 aaKnown RBP30.1■■■□□ 2.41
TTC3-225ENST00000540756 AOX1Q06278 1338 aa30.1■■■□□ 2.41
TTC3-225ENST00000540756 TRIM6-TRIM34B2RNG4 842 aa30.1■■■□□ 2.41
TTC3-225ENST00000540756 PHF14O94880 888 aa30.1■■■□□ 2.41
TTC3-225ENST00000540756 RILPL2Q969X0 211 aa30.1■■■□□ 2.41
TTC3-225ENST00000540756 TBC1D32Q96NH3 1257 aa30.1■■■□□ 2.41
TTC3-225ENST00000540756 USP42Q9H9J4 1324 aaKnown RBP30.09■■■□□ 2.41
TTC3-225ENST00000540756 POTEAQ6S8J7 498 aa30.09■■■□□ 2.41
TTC3-225ENST00000540756 CLEC4GQ6UXB4 293 aa30.09■■■□□ 2.41
TTC3-225ENST00000540756 BICDL1Q6ZP65 573 aa30.09■■■□□ 2.41
TTC3-225ENST00000540756 FBXO41Q8TF61 875 aa30.09■■■□□ 2.41
TTC3-225ENST00000540756 ARHGEF1Q92888 912 aaKnown RBP30.09■■■□□ 2.41
TTC3-225ENST00000540756 UPF2Q9HAU5 1272 aaKnown RBP30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms