RNA–Protein interactions for RNA: ENST00000540627.5

KPNB1-203, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-203ENST00000540627 SMC3Q9UQE7 1217 aa8.7□□□□□ -1.02
KPNB1-203ENST00000540627 HDAC5Q9UQL6 1122 aa8.7□□□□□ -1.02
KPNB1-203ENST00000540627 ATP6V1DQ9Y5K8 247 aa8.7□□□□□ -1.02
KPNB1-203ENST00000540627 BTBD11A6QL63 1104 aa8.7□□□□□ -1.02
KPNB1-203ENST00000540627 STX6O43752 255 aa8.7□□□□□ -1.02
KPNB1-203ENST00000540627 ZSCAN22P10073 491 aaPredicted RBP8.7□□□□□ -1.02
KPNB1-203ENST00000540627 XPCQ01831 940 aaPredicted RBP8.7□□□□□ -1.02
KPNB1-203ENST00000540627 NBPF6Q5VWK0 638 aa8.7□□□□□ -1.02
KPNB1-203ENST00000540627 RASEFQ8IZ41 740 aa8.7□□□□□ -1.02
KPNB1-203ENST00000540627 GPATCH3Q96I76 525 aa8.7□□□□□ -1.02
KPNB1-203ENST00000540627 NBPF4Q96M43 638 aa8.7□□□□□ -1.02
KPNB1-203ENST00000540627 PHF8Q9UPP1 1060 aa8.7□□□□□ -1.02
KPNB1-203ENST00000540627 CASTP20810 708 aaKnown RBP8.7□□□□□ -1.02
KPNB1-203ENST00000540627 ZNF530Q6P9A1 599 aaPredicted RBP8.7□□□□□ -1.02
KPNB1-203ENST00000540627 TMEM87AQ8NBN3 555 aa8.7□□□□□ -1.02
KPNB1-203ENST00000540627 C9orf78Q9NZ63 289 aaPredicted RBP8.7□□□□□ -1.02
KPNB1-203ENST00000540627 DBF4Q9UBU7 674 aaPredicted RBP8.7□□□□□ -1.02
KPNB1-203ENST00000540627 R3HCC1Q9Y3T6 440 aaKnown RBP8.7□□□□□ -1.02
KPNB1-203ENST00000540627 LMTK3Q96Q04 1460 aa8.69□□□□□ -1.02
KPNB1-203ENST00000540627 USP42Q9H9J4 1324 aaKnown RBP8.69□□□□□ -1.02
KPNB1-203ENST00000540627 ANXA1P04083 346 aa8.69□□□□□ -1.02
KPNB1-203ENST00000540627 SYT1P21579 422 aa8.69□□□□□ -1.02
KPNB1-203ENST00000540627 BRD2P25440 801 aaKnown RBP8.69□□□□□ -1.02
KPNB1-203ENST00000540627 CCDC183Q5T5S1 534 aa8.69□□□□□ -1.02
KPNB1-203ENST00000540627 RUFY3Q7L099 469 aa8.69□□□□□ -1.02
KPNB1-203ENST00000540627 ECHDC1Q9NTX5 307 aa8.69□□□□□ -1.02
KPNB1-203ENST00000540627 CNPY2Q9Y2B0 182 aa8.69□□□□□ -1.02
KPNB1-203ENST00000540627 ARIH1Q9Y4X5 557 aaPredicted RBP8.69□□□□□ -1.02
KPNB1-203ENST00000540627 RPAP1Q9BWH6 1393 aaPredicted RBP8.69□□□□□ -1.02
KPNB1-203ENST00000540627 MARF1Q9Y4F3 1742 aaKnown RBP8.69□□□□□ -1.02
KPNB1-203ENST00000540627 UNCXA6NJT0 531 aa8.69□□□□□ -1.02
KPNB1-203ENST00000540627 KCNQ3O43525 872 aa8.69□□□□□ -1.02
KPNB1-203ENST00000540627 LETM1O95202 739 aaPredicted RBP8.69□□□□□ -1.02
KPNB1-203ENST00000540627 IFIT2P09913 472 aaKnown RBP8.69□□□□□ -1.02
KPNB1-203ENST00000540627 MTX1Q13505 466 aa8.69□□□□□ -1.02
KPNB1-203ENST00000540627 PLEKHO1Q53GL0 409 aaPredicted RBP8.69□□□□□ -1.02
KPNB1-203ENST00000540627 ERC1Q8IUD2 1116 aa8.69□□□□□ -1.02
KPNB1-203ENST00000540627 USP54Q70EL1 1684 aa8.68□□□□□ -1.02
KPNB1-203ENST00000540627 ADCY9O60503 1353 aa8.68□□□□□ -1.02
KPNB1-203ENST00000540627 CAPN15O75808 1086 aa8.68□□□□□ -1.02
KPNB1-203ENST00000540627 ALDH1L1O75891 902 aa8.68□□□□□ -1.02
KPNB1-203ENST00000540627 UBE2HP62256 183 aa8.68□□□□□ -1.02
KPNB1-203ENST00000540627 UVSSAQ2YD98 709 aa8.68□□□□□ -1.02
KPNB1-203ENST00000540627 AKAP4Q5JQC9 854 aa8.68□□□□□ -1.02
KPNB1-203ENST00000540627 LARP6Q9BRS8 491 aaKnown RBP8.68□□□□□ -1.02
KPNB1-203ENST00000540627 GOPCQ9HD26 462 aa8.68□□□□□ -1.02
KPNB1-203ENST00000540627 F13A1P00488 732 aa8.68□□□□□ -1.02
KPNB1-203ENST00000540627 MPRIPQ6WCQ1 1025 aa8.68□□□□□ -1.02
KPNB1-203ENST00000540627 KCNH5Q8NCM2 988 aa8.68□□□□□ -1.02
KPNB1-203ENST00000540627 JAKMIP1Q96N16 626 aaKnown RBP8.68□□□□□ -1.02
KPNB1-203ENST00000540627 PDRG1Q9NUG6 133 aa8.68□□□□□ -1.02
KPNB1-203ENST00000540627 MAP3K2Q9Y2U5 619 aa8.68□□□□□ -1.02
KPNB1-203ENST00000540627 CYP46A1Q9Y6A2 500 aa8.68□□□□□ -1.02
KPNB1-203ENST00000540627 ZKSCAN1P17029 563 aaPredicted RBP8.67□□□□□ -1.02
KPNB1-203ENST00000540627 PSME1Q06323 249 aa8.67□□□□□ -1.02
KPNB1-203ENST00000540627 AMOTQ4VCS5 1084 aa8.67□□□□□ -1.02
KPNB1-203ENST00000540627 C1orf141Q5JVX7 400 aa8.67□□□□□ -1.02
KPNB1-203ENST00000540627 VPS53Q5VIR6 699 aa8.67□□□□□ -1.02
KPNB1-203ENST00000540627 PRPF40BQ6NWY9 871 aaKnown RBP8.67□□□□□ -1.02
KPNB1-203ENST00000540627 CCDC102AQ96A19 550 aa8.67□□□□□ -1.02
KPNB1-203ENST00000540627 ZSCAN31Q96LW9 406 aaPredicted RBP8.67□□□□□ -1.02
KPNB1-203ENST00000540627 SH2B1Q9NRF2 756 aaPredicted RBP8.67□□□□□ -1.02
KPNB1-203ENST00000540627 HYPKQ9NX55 129 aa8.67□□□□□ -1.02
KPNB1-203ENST00000540627 MED1Q15648 1581 aaPredicted RBP8.67□□□□□ -1.02
KPNB1-203ENST00000540627 FIBPO43427 364 aa8.67□□□□□ -1.02
KPNB1-203ENST00000540627 CPA1P15085 419 aa8.67□□□□□ -1.02
KPNB1-203ENST00000540627 KSR2Q6VAB6 950 aa8.67□□□□□ -1.02
KPNB1-203ENST00000540627 EVI5LQ96CN4 794 aa8.67□□□□□ -1.02
KPNB1-203ENST00000540627 TM6SF1Q9BZW5 370 aa8.67□□□□□ -1.02
KPNB1-203ENST00000540627 TCHHQ07283 1943 aa8.67□□□□□ -1.02
KPNB1-203ENST00000540627 LTN1O94822 1766 aa8.67□□□□□ -1.02
KPNB1-203ENST00000540627 KCNJ4P48050 445 aa8.67□□□□□ -1.02
KPNB1-203ENST00000540627 PTH1RQ03431 593 aa8.67□□□□□ -1.02
KPNB1-203ENST00000540627 KIAA2012Q0VF49 1180 aa8.67□□□□□ -1.02
KPNB1-203ENST00000540627 AACSQ86V21 672 aa8.67□□□□□ -1.02
KPNB1-203ENST00000540627 CCDC83Q8IWF9 413 aa8.67□□□□□ -1.02
KPNB1-203ENST00000540627 PDCL3Q9H2J4 239 aa8.67□□□□□ -1.02
KPNB1-203ENST00000540627 SETD1BQ9UPS6 1966 aaKnown RBP8.67□□□□□ -1.02
KPNB1-203ENST00000540627 GJB2P29033 226 aa8.66□□□□□ -1.02
KPNB1-203ENST00000540627 LRRC59Q96AG4 307 aaKnown RBP8.66□□□□□ -1.02
KPNB1-203ENST00000540627 KDM3BQ7LBC6 1761 aa8.66□□□□□ -1.02
KPNB1-203ENST00000540627 ADGRL3Q9HAR2 1447 aa8.66□□□□□ -1.02
KPNB1-203ENST00000540627 HIP1O00291 1037 aa8.66□□□□□ -1.02
KPNB1-203ENST00000540627 PCMTD1Q96MG8 357 aaPredicted RBP8.66□□□□□ -1.02
KPNB1-203ENST00000540627 ZSWIM6Q9HCJ5 1215 aa8.66□□□□□ -1.02
KPNB1-203ENST00000540627 PA2G4Q9UQ80 394 aaKnown RBP8.66□□□□□ -1.02
KPNB1-203ENST00000540627 GPR37O15354 613 aa8.65□□□□□ -1.02
KPNB1-203ENST00000540627 RNMTO43148 476 aaKnown RBP8.65□□□□□ -1.02
KPNB1-203ENST00000540627 GIGYF1O75420 1035 aaPredicted RBP8.65□□□□□ -1.02
KPNB1-203ENST00000540627 LARGE1O95461 756 aa8.65□□□□□ -1.02
KPNB1-203ENST00000540627 DDX58O95786 925 aaKnown RBP8.65□□□□□ -1.02
KPNB1-203ENST00000540627 G3BP1Q13283 466 aaKnown RBP eCLIP8.65□□□□□ -1.021e-7■■□□□ 11.4
KPNB1-203ENST00000540627 ADCK5Q3MIX3 580 aa8.65□□□□□ -1.02
KPNB1-203ENST00000540627 USP25Q9UHP3 1055 aa8.65□□□□□ -1.02
KPNB1-203ENST00000540627 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.65□□□□□ -1.029e-8■■■□□ 14.6
KPNB1-203ENST00000540627 CCDC171Q6TFL3 1326 aa8.65□□□□□ -1.02
KPNB1-203ENST00000540627 NFAT5O94916 1531 aa8.65□□□□□ -1.02
KPNB1-203ENST00000540627 UQCRHLA0A096LP55 91 aa8.65□□□□□ -1.02
KPNB1-203ENST00000540627 VPS37CA5D8V6 355 aaPredicted RBP8.65□□□□□ -1.02
KPNB1-203ENST00000540627 CARNS1A5YM72 827 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms