RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 DLK2Q6UY11 383 aa10.82□□□□□ -0.68
LRP6-204ENST00000540415 TPTE2Q6XPS3 522 aa10.82□□□□□ -0.68
LRP6-204ENST00000540415 SAPCD2Q86UD0 394 aa10.82□□□□□ -0.68
LRP6-204ENST00000540415 GLIS2Q9BZE0 524 aaPredicted RBP10.82□□□□□ -0.68
LRP6-204ENST00000540415 CEMIPQ8WUJ3 1361 aa10.81□□□□□ -0.68
LRP6-204ENST00000540415 U2SURPO15042 1029 aaKnown RBP10.81□□□□□ -0.68
LRP6-204ENST00000540415 ALDH1B1P30837 517 aa10.81□□□□□ -0.68
LRP6-204ENST00000540415 USP50Q70EL3 339 aaPredicted RBP10.81□□□□□ -0.68
LRP6-204ENST00000540415 LARGE2Q8N3Y3 721 aa10.81□□□□□ -0.68
LRP6-204ENST00000540415 PHACTR3Q96KR7 559 aa10.81□□□□□ -0.68
LRP6-204ENST00000540415 ZNF652Q9Y2D9 606 aa10.81□□□□□ -0.68
LRP6-204ENST00000540415 COL3A1P02461 1466 aaPredicted RBP10.81□□□□□ -0.68
LRP6-204ENST00000540415 EIF4G2P78344 907 aaKnown RBP eCLIP10.8□□□□□ -0.68
LRP6-204ENST00000540415 CNGB1Q14028 1251 aaPredicted RBP10.8□□□□□ -0.68
LRP6-204ENST00000540415 CRY2Q49AN0 593 aa10.8□□□□□ -0.68
LRP6-204ENST00000540415 CC2D1BQ5T0F9 858 aaKnown RBP10.8□□□□□ -0.68
LRP6-204ENST00000540415 C3orf67Q6ZVT6 689 aa10.8□□□□□ -0.68
LRP6-204ENST00000540415 GAS2L2Q8NHY3 880 aa10.8□□□□□ -0.68
LRP6-204ENST00000540415 ZNF408Q9H9D4 720 aa10.8□□□□□ -0.68
LRP6-204ENST00000540415 SIPA1L3O60292 1781 aaPredicted RBP10.8□□□□□ -0.68
LRP6-204ENST00000540415 SHTN1A0MZ66 631 aa10.79□□□□□ -0.68
LRP6-204ENST00000540415 GTF2E1P29083 439 aaPredicted RBP10.79□□□□□ -0.68
LRP6-204ENST00000540415 BRPF1P55201 1214 aaPredicted RBP10.79□□□□□ -0.68
LRP6-204ENST00000540415 GPRC5DQ9NZD1 345 aa10.79□□□□□ -0.68
LRP6-204ENST00000540415 SNRPA1P09661 255 aaKnown RBP10.78□□□□□ -0.68
LRP6-204ENST00000540415 HIRAP54198 1017 aaPredicted RBP10.78□□□□□ -0.68
LRP6-204ENST00000540415 CXCL9Q07325 125 aa10.78□□□□□ -0.68
LRP6-204ENST00000540415 AOC3Q16853 763 aa10.78□□□□□ -0.68
LRP6-204ENST00000540415 MCM10Q7L590 875 aa10.78□□□□□ -0.68
LRP6-204ENST00000540415 NIM1KQ8IY84 436 aa10.78□□□□□ -0.68
LRP6-204ENST00000540415 NGEFQ8N5V2 710 aa10.78□□□□□ -0.68
LRP6-204ENST00000540415 TRPM4Q8TD43 1214 aa10.78□□□□□ -0.68
LRP6-204ENST00000540415 ADARB2Q9NS39 739 aaKnown RBP10.78□□□□□ -0.68
LRP6-204ENST00000540415 PPEF1O14829 653 aaPredicted RBP10.77□□□□□ -0.69
LRP6-204ENST00000540415 PPIP5K2O43314 1243 aa10.77□□□□□ -0.69
LRP6-204ENST00000540415 CA12O43570 354 aa10.77□□□□□ -0.69
LRP6-204ENST00000540415 GPTP24298 496 aa10.77□□□□□ -0.69
LRP6-204ENST00000540415 GMPSP49915 693 aaPredicted RBP10.77□□□□□ -0.69
LRP6-204ENST00000540415 DCTN1Q14203 1278 aa10.77□□□□□ -0.69
LRP6-204ENST00000540415 UBN2Q6ZU65 1347 aa10.77□□□□□ -0.69
LRP6-204ENST00000540415 NPC1L1Q9UHC9 1359 aa10.77□□□□□ -0.69
LRP6-204ENST00000540415 CASP8AP2Q9UKL3 1982 aa10.76□□□□□ -0.69
LRP6-204ENST00000540415 HOXA10P31260 410 aaPredicted RBP10.76□□□□□ -0.69
LRP6-204ENST00000540415 PRKAR2BP31323 418 aa10.76□□□□□ -0.69
LRP6-204ENST00000540415 CC2D2BQ6DHV5 1058 aa10.76□□□□□ -0.69
LRP6-204ENST00000540415 TTLL7Q6ZT98 887 aa10.76□□□□□ -0.69
LRP6-204ENST00000540415 RPGRQ92834 1020 aaKnown RBP10.76□□□□□ -0.69
LRP6-204ENST00000540415 MIS18AQ9NYP9 233 aa10.76□□□□□ -0.69
LRP6-204ENST00000540415 PDE4DIPQ5VU43 2346 aa10.75□□□□□ -0.69
LRP6-204ENST00000540415 PER1O15534 1290 aaPredicted RBP10.75□□□□□ -0.69
LRP6-204ENST00000540415 RAD17O75943 681 aa10.75□□□□□ -0.69
LRP6-204ENST00000540415 SUSD4Q5VX71 490 aa10.75□□□□□ -0.69
LRP6-204ENST00000540415 USP48Q86UV5 1035 aa10.75□□□□□ -0.69
LRP6-204ENST00000540415 HHIPL1Q96JK4 782 aa10.75□□□□□ -0.69
LRP6-204ENST00000540415 RSPH6AQ9H0K4 717 aa10.75□□□□□ -0.69
LRP6-204ENST00000540415 PGAP2Q9UHJ9 254 aa10.75□□□□□ -0.69
LRP6-204ENST00000540415 RIC1Q4ADV7 1423 aa10.75□□□□□ -0.69
LRP6-204ENST00000540415 FAM155AB1AL88 458 aaPredicted RBP10.74□□□□□ -0.69
LRP6-204ENST00000540415 HUNKP57058 714 aa10.74□□□□□ -0.69
LRP6-204ENST00000540415 RBM17Q96I25 401 aaKnown RBP10.74□□□□□ -0.69
LRP6-204ENST00000540415 ZNRF3Q9ULT6 936 aa10.74□□□□□ -0.69
LRP6-204ENST00000540415 TIMELESSQ9UNS1 1208 aa10.74□□□□□ -0.69
LRP6-204ENST00000540415 TRPM7Q96QT4 1865 aa10.73□□□□□ -0.69
LRP6-204ENST00000540415 RGL2O15211 777 aa10.73□□□□□ -0.69
LRP6-204ENST00000540415 NTSR2O95665 410 aa10.73□□□□□ -0.69
LRP6-204ENST00000540415 NOGQ13253 232 aa10.73□□□□□ -0.69
LRP6-204ENST00000540415 CRAMP1Q96RY5 1269 aa10.73□□□□□ -0.69
LRP6-204ENST00000540415 NYXQ9GZU5 481 aa10.73□□□□□ -0.69
LRP6-204ENST00000540415 ZBTB3Q9H5J0 574 aa10.73□□□□□ -0.69
LRP6-204ENST00000540415 KIF7Q2M1P5 1343 aa10.73□□□□□ -0.69
LRP6-204ENST00000540415 YDJCA8MPS7 323 aa10.72□□□□□ -0.69
LRP6-204ENST00000540415 TRPA1O75762 1119 aa10.72□□□□□ -0.69
LRP6-204ENST00000540415 EGFRP00533 1210 aa10.72□□□□□ -0.69
LRP6-204ENST00000540415 KIF23Q02241 960 aaPredicted RBP10.72□□□□□ -0.69
LRP6-204ENST00000540415 PRPF38BQ5VTL8 546 aaKnown RBP10.72□□□□□ -0.69
LRP6-204ENST00000540415 CDC37L1Q7L3B6 337 aa10.72□□□□□ -0.69
LRP6-204ENST00000540415 BCL2L13Q9BXK5 485 aa10.72□□□□□ -0.69
LRP6-204ENST00000540415 ZBTB12Q9Y330 459 aaPredicted RBP10.72□□□□□ -0.69
LRP6-204ENST00000540415 RRP7AQ9Y3A4 280 aaKnown RBP10.72□□□□□ -0.69
LRP6-204ENST00000540415 ATP6V0A2Q9Y487 856 aa10.72□□□□□ -0.69
LRP6-204ENST00000540415 ABCC4O15439 1325 aa10.72□□□□□ -0.69
LRP6-204ENST00000540415 MAP3K15Q6ZN16 1313 aa10.72□□□□□ -0.69
LRP6-204ENST00000540415 ERVV-1B6SEH8 477 aa10.71□□□□□ -0.69
LRP6-204ENST00000540415 ADM5C9JUS6 153 aa10.71□□□□□ -0.69
LRP6-204ENST00000540415 MYL6BP14649 208 aa10.71□□□□□ -0.69
LRP6-204ENST00000540415 SAMD7Q7Z3H4 446 aa10.71□□□□□ -0.69
LRP6-204ENST00000540415 ZNF34Q8IZ26 560 aa10.71□□□□□ -0.69
LRP6-204ENST00000540415 RTFDC1Q9BY42 306 aaPredicted RBP10.71□□□□□ -0.69
LRP6-204ENST00000540415 RNF186Q9NXI6 227 aa10.71□□□□□ -0.69
LRP6-204ENST00000540415 CNOT7Q9UIV1 285 aaKnown RBP10.71□□□□□ -0.69
LRP6-204ENST00000540415 KIAA2012Q0VF49 1180 aa10.7□□□□□ -0.7
LRP6-204ENST00000540415 TBC1D10BQ4KMP7 808 aaPredicted RBP10.7□□□□□ -0.7
LRP6-204ENST00000540415 GRIPAP1Q4V328 841 aa10.7□□□□□ -0.7
LRP6-204ENST00000540415 RGMBQ6NW40 437 aa10.7□□□□□ -0.7
LRP6-204ENST00000540415 MICALL2Q8IY33 904 aa10.7□□□□□ -0.7
LRP6-204ENST00000540415 ZC3H15Q8WU90 426 aaKnown RBP10.7□□□□□ -0.7
LRP6-204ENST00000540415 IBTKQ9P2D0 1353 aaPredicted RBP10.69□□□□□ -0.7
LRP6-204ENST00000540415 DPP8Q6V1X1 898 aaPredicted RBP10.69□□□□□ -0.7
LRP6-204ENST00000540415 KIF6Q6ZMV9 814 aa10.69□□□□□ -0.7
LRP6-204ENST00000540415 RTF1Q92541 710 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms