RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 RFC4P35249 363 aa20.16■□□□□ 0.82
TRAF3-204ENST00000539721 CASP7P55210 303 aa20.16■□□□□ 0.82
TRAF3-204ENST00000539721 EN1Q05925 392 aaPredicted RBP20.16■□□□□ 0.82
TRAF3-204ENST00000539721 USPL1Q5W0Q7 1092 aa20.16■□□□□ 0.82
TRAF3-204ENST00000539721 SRP68Q9UHB9 627 aaKnown RBP20.16■□□□□ 0.82
TRAF3-204ENST00000539721 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.16■□□□□ 0.82
TRAF3-204ENST00000539721 SSFA2P28290 1259 aa20.16■□□□□ 0.82
TRAF3-204ENST00000539721 RTL5Q5HYW3 569 aaPredicted RBP20.16■□□□□ 0.82
TRAF3-204ENST00000539721 BICC1Q9H694 974 aaKnown RBP20.16■□□□□ 0.82
TRAF3-204ENST00000539721 UBN2Q6ZU65 1347 aa20.16■□□□□ 0.82
TRAF3-204ENST00000539721 PNMA6EA0A0J9YXQ4 647 aa20.15■□□□□ 0.82
TRAF3-204ENST00000539721 PCCAP05165 728 aaPredicted RBP20.15■□□□□ 0.82
TRAF3-204ENST00000539721 BAG6P46379 1132 aa20.15■□□□□ 0.82
TRAF3-204ENST00000539721 EZH2Q15910 746 aaKnown RBP20.15■□□□□ 0.82
TRAF3-204ENST00000539721 PPP1R42Q7Z4L9 355 aa20.15■□□□□ 0.82
TRAF3-204ENST00000539721 GCC1Q96CN9 775 aa20.15■□□□□ 0.82
TRAF3-204ENST00000539721 KAZALD1Q96I82 304 aa20.15■□□□□ 0.82
TRAF3-204ENST00000539721 CAMKK2Q96RR4 588 aa20.15■□□□□ 0.82
TRAF3-204ENST00000539721 TUBGCP6Q96RT7 1819 aa20.15■□□□□ 0.82
TRAF3-204ENST00000539721 NIP7Q9Y221 180 aaKnown RBP eCLIP20.15■□□□□ 0.82
TRAF3-204ENST00000539721 USP42Q9H9J4 1324 aaKnown RBP20.14■□□□□ 0.81
TRAF3-204ENST00000539721 PARP10Q53GL7 1025 aa20.14■□□□□ 0.81
TRAF3-204ENST00000539721 SMC5Q8IY18 1101 aa20.14■□□□□ 0.81
TRAF3-204ENST00000539721 ZBTB38Q8NAP3 1195 aaPredicted RBP20.14■□□□□ 0.81
TRAF3-204ENST00000539721 BCL2L12Q9HB09 334 aa20.14■□□□□ 0.81
TRAF3-204ENST00000539721 MTX1Q13505 466 aa20.13■□□□□ 0.81
TRAF3-204ENST00000539721 ZNF827Q17R98 1081 aa20.13■□□□□ 0.81
TRAF3-204ENST00000539721 AKT1S1Q96B36 256 aa20.13■□□□□ 0.81
TRAF3-204ENST00000539721 TRMT112Q9UI30 125 aaKnown RBP20.13■□□□□ 0.81
TRAF3-204ENST00000539721 SRGAP3O43295 1099 aa20.13■□□□□ 0.81
TRAF3-204ENST00000539721 FAM89AQ96GI7 184 aa20.13■□□□□ 0.81
TRAF3-204ENST00000539721 DCTPP1Q9H773 170 aa20.13■□□□□ 0.81
TRAF3-204ENST00000539721 TFCP2L1Q9NZI6 479 aa20.13■□□□□ 0.81
TRAF3-204ENST00000539721 EPHA10Q5JZY3 1008 aa20.12■□□□□ 0.81
TRAF3-204ENST00000539721 SSH3Q8TE77 659 aa20.12■□□□□ 0.81
TRAF3-204ENST00000539721 POLA2Q14181 598 aa20.11■□□□□ 0.81
TRAF3-204ENST00000539721 SUSD4Q5VX71 490 aa20.11■□□□□ 0.81
TRAF3-204ENST00000539721 CDHR2Q9BYE9 1310 aa20.11■□□□□ 0.81
TRAF3-204ENST00000539721 FAM177BA6PVY3 158 aa20.11■□□□□ 0.81
TRAF3-204ENST00000539721 TBC1D9BQ66K14 1250 aa20.11■□□□□ 0.81
TRAF3-204ENST00000539721 UTP14AQ9BVJ6 771 aaKnown RBP20.11■□□□□ 0.81
TRAF3-204ENST00000539721 PDZRN3Q9UPQ7 1066 aa20.11■□□□□ 0.81
TRAF3-204ENST00000539721 COL24A1Q17RW2 1714 aa20.1■□□□□ 0.81
TRAF3-204ENST00000539721 BICDL1Q6ZP65 573 aa20.1■□□□□ 0.81
TRAF3-204ENST00000539721 DEFB132Q7Z7B7 95 aa20.1■□□□□ 0.81
TRAF3-204ENST00000539721 MYH3P11055 1940 aa20.1■□□□□ 0.81
TRAF3-204ENST00000539721 FOXO4P98177 505 aa20.09■□□□□ 0.81
TRAF3-204ENST00000539721 RABL6Q3YEC7 729 aaPredicted RBP20.09■□□□□ 0.81
TRAF3-204ENST00000539721 CCDC125Q86Z20 511 aa20.09■□□□□ 0.81
TRAF3-204ENST00000539721 SH3TC1Q8TE82 1336 aa20.08■□□□□ 0.8
TRAF3-204ENST00000539721 NTSR2O95665 410 aa20.08■□□□□ 0.8
TRAF3-204ENST00000539721 LMBR1LQ6UX01 489 aa20.08■□□□□ 0.8
TRAF3-204ENST00000539721 SKAP1Q86WV1 359 aa20.08■□□□□ 0.8
TRAF3-204ENST00000539721 PELP1Q8IZL8 1130 aaKnown RBP20.08■□□□□ 0.8
TRAF3-204ENST00000539721 SYNE4Q8N205 404 aa20.08■□□□□ 0.8
TRAF3-204ENST00000539721 FLAD1Q8NFF5 587 aa20.08■□□□□ 0.8
TRAF3-204ENST00000539721 SETDB2Q96T68 719 aa20.08■□□□□ 0.8
TRAF3-204ENST00000539721 PLA2G12BQ9BX93 195 aa20.08■□□□□ 0.8
TRAF3-204ENST00000539721 LAMB2P55268 1798 aa20.08■□□□□ 0.8
TRAF3-204ENST00000539721 IRS4O14654 1257 aaPredicted RBP20.07■□□□□ 0.8
TRAF3-204ENST00000539721 NUCB1Q02818 461 aa20.07■□□□□ 0.8
TRAF3-204ENST00000539721 ANKRD45Q5TZF3 282 aa20.07■□□□□ 0.8
TRAF3-204ENST00000539721 EXOC6BQ9Y2D4 811 aa20.07■□□□□ 0.8
TRAF3-204ENST00000539721 CHMP3Q9Y3E7 222 aa20.07■□□□□ 0.8
TRAF3-204ENST00000539721 DDX60Q8IY21 1712 aaKnown RBP20.06■□□□□ 0.8
TRAF3-204ENST00000539721 STK32BQ9NY57 414 aa20.06■□□□□ 0.8
TRAF3-204ENST00000539721 MSH5O43196 834 aa20.06■□□□□ 0.8
TRAF3-204ENST00000539721 SURF6O75683 361 aaKnown RBP20.06■□□□□ 0.8
TRAF3-204ENST00000539721 GYS1P13807 737 aa20.06■□□□□ 0.8
TRAF3-204ENST00000539721 ZBTB47Q9UFB7 747 aaPredicted RBP20.06■□□□□ 0.8
TRAF3-204ENST00000539721 QSER1Q2KHR3 1735 aa20.05■□□□□ 0.8
TRAF3-204ENST00000539721 APBB1O00213 710 aa20.05■□□□□ 0.8
TRAF3-204ENST00000539721 CHD1LQ86WJ1 897 aa20.05■□□□□ 0.8
TRAF3-204ENST00000539721 COL23A1Q86Y22 540 aaPredicted RBP20.05■□□□□ 0.8
TRAF3-204ENST00000539721 ANO8Q9HCE9 1232 aaPredicted RBP20.05■□□□□ 0.8
TRAF3-204ENST00000539721 PDE8AO60658 829 aa20.04■□□□□ 0.8
TRAF3-204ENST00000539721 SLC15A2Q16348 729 aa20.04■□□□□ 0.8
TRAF3-204ENST00000539721 NUTM1Q86Y26 1132 aa20.04■□□□□ 0.8
TRAF3-204ENST00000539721 NYXQ9GZU5 481 aa20.04■□□□□ 0.8
TRAF3-204ENST00000539721 PNPLA7Q6ZV29 1317 aa20.04■□□□□ 0.8
TRAF3-204ENST00000539721 HSP90B1P14625 803 aaKnown RBP20.03■□□□□ 0.8
TRAF3-204ENST00000539721 RGS3P49796 1198 aa20.03■□□□□ 0.8
TRAF3-204ENST00000539721 NBPF5PQ86XG9 351 aaPredicted RBP20.03■□□□□ 0.8
TRAF3-204ENST00000539721 LNPKQ9C0E8 428 aa20.03■□□□□ 0.8
TRAF3-204ENST00000539721 PA2G4Q9UQ80 394 aaKnown RBP20.03■□□□□ 0.8
TRAF3-204ENST00000539721 CARMIL3Q8ND23 1372 aa20.03■□□□□ 0.8
TRAF3-204ENST00000539721 GTF2E1P29083 439 aaPredicted RBP20.03■□□□□ 0.8
TRAF3-204ENST00000539721 CTSWP56202 376 aa20.03■□□□□ 0.8
TRAF3-204ENST00000539721 NFIXQ14938 502 aa20.03■□□□□ 0.8
TRAF3-204ENST00000539721 HSP90AB4PQ58FF6 505 aa20.03■□□□□ 0.8
TRAF3-204ENST00000539721 HCLS1P14317 486 aaPredicted RBP20.02■□□□□ 0.8
TRAF3-204ENST00000539721 RFX5P48382 616 aaPredicted RBP20.02■□□□□ 0.8
TRAF3-204ENST00000539721 OS9Q13438 667 aaPredicted RBP20.02■□□□□ 0.8
TRAF3-204ENST00000539721 NOP58Q9Y2X3 529 aaKnown RBP20.02■□□□□ 0.8
TRAF3-204ENST00000539721 CASZ1Q86V15 1759 aa20.01■□□□□ 0.79
TRAF3-204ENST00000539721 RAB11FIP3O75154 756 aa20.01■□□□□ 0.79
TRAF3-204ENST00000539721 CSF1RP07333 972 aa20.01■□□□□ 0.79
TRAF3-204ENST00000539721 ERFEQ4G0M1 354 aa20.01■□□□□ 0.79
TRAF3-204ENST00000539721 LRRCC1Q9C099 1032 aa20.01■□□□□ 0.79
TRAF3-204ENST00000539721 SMARCA5O60264 1052 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms