RNA–Protein interactions for RNA: ENST00000539254.1

CELF1-219, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 4

Gene CELF1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-219ENST00000539254 CNKSR1Q969H4 720 aa12.44□□□□□ -0.42
CELF1-219ENST00000539254 MYD88Q99836 296 aa12.44□□□□□ -0.42
CELF1-219ENST00000539254 MYH16Q9H6N6 1097 aa12.44□□□□□ -0.42
CELF1-219ENST00000539254 TRMT112Q9UI30 125 aaKnown RBP12.44□□□□□ -0.42
CELF1-219ENST00000539254 PDZRN3Q9UPQ7 1066 aa12.44□□□□□ -0.42
CELF1-219ENST00000539254 BRCA1P38398 1863 aaKnown RBP12.44□□□□□ -0.42
CELF1-219ENST00000539254 NCBP3Q53F19 620 aaKnown RBP12.43□□□□□ -0.42
CELF1-219ENST00000539254 PRPF40BQ6NWY9 871 aaKnown RBP12.43□□□□□ -0.42
CELF1-219ENST00000539254 OLFM4Q6UX06 510 aa12.43□□□□□ -0.42
CELF1-219ENST00000539254 C3orf67Q6ZVT6 689 aa12.43□□□□□ -0.42
CELF1-219ENST00000539254 RPGRQ92834 1020 aaKnown RBP12.43□□□□□ -0.42
CELF1-219ENST00000539254 RNF181Q9P0P0 153 aa12.43□□□□□ -0.42
CELF1-219ENST00000539254 UTRNP46939 3433 aa12.43□□□□□ -0.42
CELF1-219ENST00000539254 COL11A2P13942 1736 aaPredicted RBP12.42□□□□□ -0.42
CELF1-219ENST00000539254 VAMP4O75379 141 aa12.42□□□□□ -0.42
CELF1-219ENST00000539254 FAM89AQ96GI7 184 aa12.42□□□□□ -0.42
CELF1-219ENST00000539254 NLRP3Q96P20 1036 aa12.42□□□□□ -0.42
CELF1-219ENST00000539254 MAP3K2Q9Y2U5 619 aa12.42□□□□□ -0.42
CELF1-219ENST00000539254 CACNA1SQ13698 1873 aa12.42□□□□□ -0.42
CELF1-219ENST00000539254 DDX58O95786 925 aaKnown RBP12.41□□□□□ -0.42
CELF1-219ENST00000539254 CDCA7LQ96GN5 454 aa12.41□□□□□ -0.42
CELF1-219ENST00000539254 ISCA1Q9BUE6 129 aa12.41□□□□□ -0.42
CELF1-219ENST00000539254 CHMP4AQ9BY43 222 aa12.41□□□□□ -0.42
CELF1-219ENST00000539254 SH3TC1Q8TE82 1336 aa12.4□□□□□ -0.42
CELF1-219ENST00000539254 SLX4Q8IY92 1834 aa12.4□□□□□ -0.42
CELF1-219ENST00000539254 ARFGEF1Q9Y6D6 1849 aa12.4□□□□□ -0.42
CELF1-219ENST00000539254 PI4KAP2A4QPH2 592 aa12.4□□□□□ -0.42
CELF1-219ENST00000539254 SLC51AQ86UW1 340 aa12.4□□□□□ -0.42
CELF1-219ENST00000539254 PI4KAP1Q8N8J0 262 aa12.4□□□□□ -0.42
CELF1-219ENST00000539254 RBM17Q96I25 401 aaKnown RBP12.4□□□□□ -0.42
CELF1-219ENST00000539254 TNRC6CQ9HCJ0 1690 aaKnown RBP12.4□□□□□ -0.42
CELF1-219ENST00000539254 DLEC1Q9Y238 1755 aa12.39□□□□□ -0.43
CELF1-219ENST00000539254 KLRG2A4D1S0 409 aaPredicted RBP12.39□□□□□ -0.43
CELF1-219ENST00000539254 NFKBIEO00221 500 aa12.39□□□□□ -0.43
CELF1-219ENST00000539254 ALDH1B1P30837 517 aa12.39□□□□□ -0.43
CELF1-219ENST00000539254 PRELPP51888 382 aa12.39□□□□□ -0.43
CELF1-219ENST00000539254 FKBP5Q13451 457 aaPredicted RBP12.39□□□□□ -0.43
CELF1-219ENST00000539254 METTL22Q9BUU2 404 aaPredicted RBP12.39□□□□□ -0.43
CELF1-219ENST00000539254 GPBP1L1Q9HC44 474 aaPredicted RBP12.39□□□□□ -0.43
CELF1-219ENST00000539254 ZNF521Q96K83 1311 aa12.38□□□□□ -0.43
CELF1-219ENST00000539254 FLIIQ13045 1269 aa12.38□□□□□ -0.43
CELF1-219ENST00000539254 CCDC93Q567U6 631 aa12.38□□□□□ -0.43
CELF1-219ENST00000539254 SLC10A5Q5PT55 438 aa12.38□□□□□ -0.43
CELF1-219ENST00000539254 KSR2Q6VAB6 950 aa12.38□□□□□ -0.43
CELF1-219ENST00000539254 CCDC85AQ96PX6 553 aaPredicted RBP12.38□□□□□ -0.43
CELF1-219ENST00000539254 IBTKQ9P2D0 1353 aaPredicted RBP12.38□□□□□ -0.43
CELF1-219ENST00000539254 E9PSI1 815 aa12.37□□□□□ -0.43
CELF1-219ENST00000539254 IRS4O14654 1257 aaPredicted RBP12.37□□□□□ -0.43
CELF1-219ENST00000539254 LMNB1P20700 586 aa12.37□□□□□ -0.43
CELF1-219ENST00000539254 SLFN5Q08AF3 891 aa12.37□□□□□ -0.43
CELF1-219ENST00000539254 NEXNQ0ZGT2 675 aa12.37□□□□□ -0.43
CELF1-219ENST00000539254 CWF19L2Q2TBE0 894 aaKnown RBP12.37□□□□□ -0.43
CELF1-219ENST00000539254 CRY2Q49AN0 593 aa12.37□□□□□ -0.43
CELF1-219ENST00000539254 TAOK3Q9H2K8 898 aa12.37□□□□□ -0.43
CELF1-219ENST00000539254 CWC25Q9NXE8 425 aaPredicted RBP12.37□□□□□ -0.43
CELF1-219ENST00000539254 ANKRD36CQ5JPF3 1778 aa12.37□□□□□ -0.43
CELF1-219ENST00000539254 ARFGEF2Q9Y6D5 1785 aa12.36□□□□□ -0.43
CELF1-219ENST00000539254 ADCY9O60503 1353 aa12.36□□□□□ -0.43
CELF1-219ENST00000539254 F6X3S4 739 aa12.36□□□□□ -0.43
CELF1-219ENST00000539254 PPEF1O14829 653 aaPredicted RBP12.36□□□□□ -0.43
CELF1-219ENST00000539254 DDX46Q7L014 1031 aaKnown RBP12.36□□□□□ -0.43
CELF1-219ENST00000539254 C7orf43Q8WVR3 580 aa12.36□□□□□ -0.43
CELF1-219ENST00000539254 CRAMP1Q96RY5 1269 aa12.36□□□□□ -0.43
CELF1-219ENST00000539254 ZNF277Q9NRM2 450 aaPredicted RBP12.36□□□□□ -0.43
CELF1-219ENST00000539254 IGKV5-2P06315 115 aa12.35□□□□□ -0.43
CELF1-219ENST00000539254 TRIM28Q13263 835 aaKnown RBP12.35□□□□□ -0.43
CELF1-219ENST00000539254 SOGA3Q5TF21 947 aa12.35□□□□□ -0.43
CELF1-219ENST00000539254 ZBTB38Q8NAP3 1195 aaPredicted RBP12.35□□□□□ -0.43
CELF1-219ENST00000539254 CCDC191Q8NCU4 936 aa12.35□□□□□ -0.43
CELF1-219ENST00000539254 DNAAF4Q8WXU2 420 aa12.35□□□□□ -0.43
CELF1-219ENST00000539254 BCL2L13Q9BXK5 485 aa12.35□□□□□ -0.43
CELF1-219ENST00000539254 ABCC4O15439 1325 aa12.35□□□□□ -0.43
CELF1-219ENST00000539254 RNF123Q5XPI4 1314 aa12.35□□□□□ -0.43
CELF1-219ENST00000539254 HOXA10P31260 410 aaPredicted RBP12.34□□□□□ -0.43
CELF1-219ENST00000539254 HNRNPUQ00839 825 aaKnown RBP eCLIP12.34□□□□□ -0.43
CELF1-219ENST00000539254 SLC4A10Q6U841 1118 aa12.34□□□□□ -0.43
CELF1-219ENST00000539254 TMX4Q9H1E5 349 aaPredicted RBP12.34□□□□□ -0.43
CELF1-219ENST00000539254 NMRK2Q9NPI5 230 aa12.34□□□□□ -0.43
CELF1-219ENST00000539254 CCDC88AQ3V6T2 1871 aa12.34□□□□□ -0.43
CELF1-219ENST00000539254 NEURL1BA8MQ27 555 aa12.33□□□□□ -0.44
CELF1-219ENST00000539254 PCCAP05165 728 aaPredicted RBP12.33□□□□□ -0.44
CELF1-219ENST00000539254 FKBP4Q02790 459 aaKnown RBP eCLIP12.33□□□□□ -0.44
CELF1-219ENST00000539254 RTKN2Q8IZC4 609 aa12.33□□□□□ -0.44
CELF1-219ENST00000539254 RRAGCQ9HB90 399 aa12.33□□□□□ -0.44
CELF1-219ENST00000539254 SBF1O95248 1867 aa12.33□□□□□ -0.44
CELF1-219ENST00000539254 RIC1Q4ADV7 1423 aa12.32□□□□□ -0.44
CELF1-219ENST00000539254 PDE8AO60658 829 aa12.32□□□□□ -0.44
CELF1-219ENST00000539254 GRAPQ13588 217 aa12.32□□□□□ -0.44
CELF1-219ENST00000539254 UBE3BQ7Z3V4 1068 aa12.32□□□□□ -0.44
CELF1-219ENST00000539254 GRAPLQ8TC17 118 aaPredicted RBP12.32□□□□□ -0.44
CELF1-219ENST00000539254 CELF1Q92879 486 aaKnown RBP12.32□□□□□ -0.44
CELF1-219ENST00000539254 SEC31BQ9NQW1 1179 aa12.32□□□□□ -0.44
CELF1-219ENST00000539254 TAF1P21675 1872 aa12.31□□□□□ -0.44
CELF1-219ENST00000539254 SF3B3Q15393 1217 aaKnown RBP12.31□□□□□ -0.44
CELF1-219ENST00000539254 MRPL50Q8N5N7 158 aaKnown RBP12.31□□□□□ -0.44
CELF1-219ENST00000539254 SSH1Q8WYL5 1049 aa12.31□□□□□ -0.44
CELF1-219ENST00000539254 ATP6V0A2Q9Y487 856 aa12.31□□□□□ -0.44
CELF1-219ENST00000539254 KDM2BQ8NHM5 1336 aa12.31□□□□□ -0.44
CELF1-219ENST00000539254 LAMB2P55268 1798 aa12.3□□□□□ -0.44
CELF1-219ENST00000539254 FER1L6Q2WGJ9 1857 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms