RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 PPP1R42Q7Z4L9 355 aa19.25■□□□□ 0.67
PRPF19-203ENST00000539180 RIC3Q7Z5B4 369 aa19.25■□□□□ 0.67
PRPF19-203ENST00000539180 C2CD5Q86YS7 1000 aa19.25■□□□□ 0.67
PRPF19-203ENST00000539180 PIM2Q9P1W9 311 aa19.25■□□□□ 0.67
PRPF19-203ENST00000539180 WWC3Q9ULE0 1092 aa19.25■□□□□ 0.67
PRPF19-203ENST00000539180 FER1L6Q2WGJ9 1857 aa19.24■□□□□ 0.67
PRPF19-203ENST00000539180 DCAF8L1A6NGE4 600 aa19.24■□□□□ 0.67
PRPF19-203ENST00000539180 NPHP1O15259 732 aa19.24■□□□□ 0.67
PRPF19-203ENST00000539180 CRY2Q49AN0 593 aa19.24■□□□□ 0.67
PRPF19-203ENST00000539180 KSR2Q6VAB6 950 aa19.24■□□□□ 0.67
PRPF19-203ENST00000539180 PELP1Q8IZL8 1130 aaKnown RBP19.24■□□□□ 0.67
PRPF19-203ENST00000539180 METTL22Q9BUU2 404 aaPredicted RBP19.24■□□□□ 0.67
PRPF19-203ENST00000539180 PI4KAP2A4QPH2 592 aa19.23■□□□□ 0.67
PRPF19-203ENST00000539180 SRGNP10124 158 aa19.23■□□□□ 0.67
PRPF19-203ENST00000539180 PI4KAP1Q8N8J0 262 aa19.23■□□□□ 0.67
PRPF19-203ENST00000539180 ZNF428Q96B54 188 aa19.23■□□□□ 0.67
PRPF19-203ENST00000539180 UTP14AQ9BVJ6 771 aaKnown RBP19.23■□□□□ 0.67
PRPF19-203ENST00000539180 MAP3K2Q9Y2U5 619 aa19.23■□□□□ 0.67
PRPF19-203ENST00000539180 MYH3P11055 1940 aa19.23■□□□□ 0.67
PRPF19-203ENST00000539180 ATP5J2-PTCD1G3V325 749 aa19.22■□□□□ 0.67
PRPF19-203ENST00000539180 H0YIN7 160 aa19.22■□□□□ 0.67
PRPF19-203ENST00000539180 GRIN3BO60391 1043 aa19.22■□□□□ 0.67
PRPF19-203ENST00000539180 BCS1LQ9Y276 419 aa19.22■□□□□ 0.67
PRPF19-203ENST00000539180 SH3TC1Q8TE82 1336 aa19.22■□□□□ 0.67
PRPF19-203ENST00000539180 LRRC37AA6NMS7 1700 aa19.21■□□□□ 0.67
PRPF19-203ENST00000539180 SBF1O95248 1867 aa19.21■□□□□ 0.67
PRPF19-203ENST00000539180 CT47B1P0C2W7 299 aaPredicted RBP19.21■□□□□ 0.67
PRPF19-203ENST00000539180 DALRD3Q5D0E6 543 aaKnown RBP19.21■□□□□ 0.67
PRPF19-203ENST00000539180 SLC10A5Q5PT55 438 aa19.21■□□□□ 0.67
PRPF19-203ENST00000539180 STYK1Q6J9G0 422 aa19.21■□□□□ 0.67
PRPF19-203ENST00000539180 MYD88Q99836 296 aa19.21■□□□□ 0.67
PRPF19-203ENST00000539180 IGKV5-2P06315 115 aa19.2■□□□□ 0.66
PRPF19-203ENST00000539180 GTF2E1P29083 439 aaPredicted RBP19.2■□□□□ 0.66
PRPF19-203ENST00000539180 FKBP5Q13451 457 aaPredicted RBP19.2■□□□□ 0.66
PRPF19-203ENST00000539180 C3orf67Q6ZVT6 689 aa19.2■□□□□ 0.66
PRPF19-203ENST00000539180 MASTLQ96GX5 879 aa19.2■□□□□ 0.66
PRPF19-203ENST00000539180 COL4A1P02462 1669 aa19.2■□□□□ 0.66
PRPF19-203ENST00000539180 SNED1Q8TER0 1413 aa19.19■□□□□ 0.66
PRPF19-203ENST00000539180 MRPL50Q8N5N7 158 aaKnown RBP19.19■□□□□ 0.66
PRPF19-203ENST00000539180 CCDC191Q8NCU4 936 aa19.19■□□□□ 0.66
PRPF19-203ENST00000539180 SSH1Q8WYL5 1049 aa19.19■□□□□ 0.66
PRPF19-203ENST00000539180 TRMT112Q9UI30 125 aaKnown RBP19.19■□□□□ 0.66
PRPF19-203ENST00000539180 NPR1P16066 1061 aa19.18■□□□□ 0.66
PRPF19-203ENST00000539180 ALDH1L2Q3SY69 923 aa19.18■□□□□ 0.66
PRPF19-203ENST00000539180 SYNE4Q8N205 404 aa19.18■□□□□ 0.66
PRPF19-203ENST00000539180 TTLL6Q8N841 843 aa19.18■□□□□ 0.66
PRPF19-203ENST00000539180 DNAAF4Q8WXU2 420 aa19.18■□□□□ 0.66
PRPF19-203ENST00000539180 TAF1P21675 1872 aa19.18■□□□□ 0.66
PRPF19-203ENST00000539180 TIAM2Q8IVF5 1701 aa19.17■□□□□ 0.66
PRPF19-203ENST00000539180 NEURL1BA8MQ27 555 aa19.16■□□□□ 0.66
PRPF19-203ENST00000539180 HOXA10P31260 410 aaPredicted RBP19.16■□□□□ 0.66
PRPF19-203ENST00000539180 PRPF40BQ6NWY9 871 aaKnown RBP19.16■□□□□ 0.66
PRPF19-203ENST00000539180 ZBTB38Q8NAP3 1195 aaPredicted RBP19.16■□□□□ 0.66
PRPF19-203ENST00000539180 CNKSR1Q969H4 720 aa19.16■□□□□ 0.66
PRPF19-203ENST00000539180 ZNF622Q969S3 477 aaKnown RBP eCLIP19.16■□□□□ 0.66
PRPF19-203ENST00000539180 CWC25Q9NXE8 425 aaPredicted RBP19.16■□□□□ 0.66
PRPF19-203ENST00000539180 PCCAP05165 728 aaPredicted RBP19.15■□□□□ 0.66
PRPF19-203ENST00000539180 NEXNQ0ZGT2 675 aa19.15■□□□□ 0.66
PRPF19-203ENST00000539180 CWF19L2Q2TBE0 894 aaKnown RBP19.15■□□□□ 0.66
PRPF19-203ENST00000539180 FAM89AQ96GI7 184 aa19.15■□□□□ 0.66
PRPF19-203ENST00000539180 CDHR2Q9BYE9 1310 aa19.15■□□□□ 0.66
PRPF19-203ENST00000539180 DICER1Q9UPY3 1922 aaKnown RBP19.15■□□□□ 0.66
PRPF19-203ENST00000539180 CCDC88AQ3V6T2 1871 aa19.14■□□□□ 0.65
PRPF19-203ENST00000539180 F6X3S4 739 aa19.14■□□□□ 0.65
PRPF19-203ENST00000539180 HCLS1P14317 486 aaPredicted RBP19.14■□□□□ 0.65
PRPF19-203ENST00000539180 BRPF1P55201 1214 aaPredicted RBP19.14■□□□□ 0.65
PRPF19-203ENST00000539180 LINS1Q8NG48 757 aa19.14■□□□□ 0.65
PRPF19-203ENST00000539180 NLRP3Q96P20 1036 aa19.14■□□□□ 0.65
PRPF19-203ENST00000539180 BCL2L13Q9BXK5 485 aa19.14■□□□□ 0.65
PRPF19-203ENST00000539180 PTPRCP08575 1304 aa19.14■□□□□ 0.65
PRPF19-203ENST00000539180 LTBP1Q14766 1721 aa19.14■□□□□ 0.65
PRPF19-203ENST00000539180 C7orf43Q8WVR3 580 aa19.13■□□□□ 0.65
PRPF19-203ENST00000539180 RARSP54136 660 aaKnown RBP19.12■□□□□ 0.65
PRPF19-203ENST00000539180 BEND3Q5T5X7 828 aa19.12■□□□□ 0.65
PRPF19-203ENST00000539180 CRAMP1Q96RY5 1269 aa19.12■□□□□ 0.65
PRPF19-203ENST00000539180 SMC4Q9NTJ3 1288 aa19.12■□□□□ 0.65
PRPF19-203ENST00000539180 ABCC4O15439 1325 aa19.11■□□□□ 0.65
PRPF19-203ENST00000539180 NFKBIEO00221 500 aa19.11■□□□□ 0.65
PRPF19-203ENST00000539180 IRS4O14654 1257 aaPredicted RBP19.11■□□□□ 0.65
PRPF19-203ENST00000539180 GCKRQ14397 625 aa19.11■□□□□ 0.65
PRPF19-203ENST00000539180 RPGRQ92834 1020 aaKnown RBP19.11■□□□□ 0.65
PRPF19-203ENST00000539180 SPEF2Q9C093 1822 aa19.11■□□□□ 0.65
PRPF19-203ENST00000539180 ALDH1B1P30837 517 aa19.1■□□□□ 0.65
PRPF19-203ENST00000539180 CASP7P55210 303 aa19.1■□□□□ 0.65
PRPF19-203ENST00000539180 SF3B3Q15393 1217 aaKnown RBP19.1■□□□□ 0.65
PRPF19-203ENST00000539180 RTL5Q5HYW3 569 aaPredicted RBP19.1■□□□□ 0.65
PRPF19-203ENST00000539180 DUOX1Q9NRD9 1551 aa19.1■□□□□ 0.65
PRPF19-203ENST00000539180 LTBP3Q9NS15 1303 aa19.09■□□□□ 0.65
PRPF19-203ENST00000539180 H7C1W4 665 aa19.09■□□□□ 0.65
PRPF19-203ENST00000539180 C21orf2O43822 256 aa19.09■□□□□ 0.65
PRPF19-203ENST00000539180 RBM17Q96I25 401 aaKnown RBP19.09■□□□□ 0.65
PRPF19-203ENST00000539180 PRELPP51888 382 aa19.08■□□□□ 0.64
PRPF19-203ENST00000539180 RASSF7Q02833 373 aa19.08■□□□□ 0.64
PRPF19-203ENST00000539180 SOGA3Q5TF21 947 aa19.08■□□□□ 0.64
PRPF19-203ENST00000539180 ARHGAP27Q6ZUM4 889 aa19.08■□□□□ 0.64
PRPF19-203ENST00000539180 A0A1B0GUL6 1792 aa19.08■□□□□ 0.64
PRPF19-203ENST00000539180 RTL9Q8NET4 1388 aa19.07■□□□□ 0.64
PRPF19-203ENST00000539180 KIF16BQ96L93 1317 aa19.07■□□□□ 0.64
PRPF19-203ENST00000539180 PDE8AO60658 829 aa19.07■□□□□ 0.64
PRPF19-203ENST00000539180 YY1P25490 414 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms