RNA–Protein interactions for RNA: ENST00000538966.5

PLXNB3-209, Transcript of plexin B3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PLXNB3, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-209ENST00000538966 CUL5Q93034 780 aa16.34■□□□□ 0.21
PLXNB3-209ENST00000538966 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
PLXNB3-209ENST00000538966 ZNF219Q9P2Y4 722 aaPredicted RBP16.34■□□□□ 0.21
PLXNB3-209ENST00000538966 ZNF652Q9Y2D9 606 aa16.34■□□□□ 0.21
PLXNB3-209ENST00000538966 HCLS1P14317 486 aaPredicted RBP16.33■□□□□ 0.21
PLXNB3-209ENST00000538966 CTNNA2P26232 953 aa16.33■□□□□ 0.21
PLXNB3-209ENST00000538966 GPATCH11Q8N954 259 aa16.33■□□□□ 0.21
PLXNB3-209ENST00000538966 CCDC12Q8WUD4 166 aaPredicted RBP16.33■□□□□ 0.21
PLXNB3-209ENST00000538966 MMRN2Q9H8L6 949 aa16.33■□□□□ 0.21
PLXNB3-209ENST00000538966 NF2P35240 595 aa16.33■□□□□ 0.21
PLXNB3-209ENST00000538966 SLC26A6Q9BXS9 759 aa16.33■□□□□ 0.21
PLXNB3-209ENST00000538966 CALCOCO1Q9P1Z2 691 aa16.33■□□□□ 0.21
PLXNB3-209ENST00000538966 MYO1BO43795 1136 aa16.33■□□□□ 0.2
PLXNB3-209ENST00000538966 KCNH5Q8NCM2 988 aa16.33■□□□□ 0.2
PLXNB3-209ENST00000538966 ANKRD18BA2A2Z9 1011 aa16.33■□□□□ 0.2
PLXNB3-209ENST00000538966 NEMFO60524 1076 aa16.33■□□□□ 0.2
PLXNB3-209ENST00000538966 TRIM21P19474 475 aaKnown RBP16.33■□□□□ 0.2
PLXNB3-209ENST00000538966 FLIIQ13045 1269 aa16.33■□□□□ 0.2
PLXNB3-209ENST00000538966 HOOK3Q86VS8 718 aa16.33■□□□□ 0.2
PLXNB3-209ENST00000538966 IPO4Q8TEX9 1081 aaKnown RBP16.33■□□□□ 0.2
PLXNB3-209ENST00000538966 WDR70Q9NW82 654 aa16.33■□□□□ 0.2
PLXNB3-209ENST00000538966 IARSP41252 1262 aaKnown RBP16.32■□□□□ 0.2
PLXNB3-209ENST00000538966 MICALCLQ6ZW33 695 aa16.32■□□□□ 0.2
PLXNB3-209ENST00000538966 ZBTB9Q96C00 473 aa16.32■□□□□ 0.2
PLXNB3-209ENST00000538966 ATP5J2-PTCD1G3V325 749 aa16.32■□□□□ 0.2
PLXNB3-209ENST00000538966 GNG11P61952 73 aa16.32■□□□□ 0.2
PLXNB3-209ENST00000538966 FAM83GA6ND36 823 aa16.32■□□□□ 0.2
PLXNB3-209ENST00000538966 ORC3Q9UBD5 711 aaPredicted RBP16.32■□□□□ 0.2
PLXNB3-209ENST00000538966 ATP2C2O75185 946 aa16.32■□□□□ 0.2
PLXNB3-209ENST00000538966 CCDC175P0C221 793 aa16.31■□□□□ 0.2
PLXNB3-209ENST00000538966 TTC22Q5TAA0 569 aa16.31■□□□□ 0.2
PLXNB3-209ENST00000538966 CALML4Q96GE6 196 aa16.31■□□□□ 0.2
PLXNB3-209ENST00000538966 NEK1Q96PY6 1258 aa16.31■□□□□ 0.2
PLXNB3-209ENST00000538966 RNF41Q9H4P4 317 aaPredicted RBP16.31■□□□□ 0.2
PLXNB3-209ENST00000538966 ECHDC1Q9NTX5 307 aa16.31■□□□□ 0.2
PLXNB3-209ENST00000538966 METAP2P50579 478 aaKnown RBP eCLIP16.31■□□□□ 0.2
PLXNB3-209ENST00000538966 CNPY2Q9Y2B0 182 aa16.31■□□□□ 0.2
PLXNB3-209ENST00000538966 UBE2HP62256 183 aa16.31■□□□□ 0.2
PLXNB3-209ENST00000538966 ABCC11Q96J66 1382 aa16.31■□□□□ 0.2
PLXNB3-209ENST00000538966 PRC1O43663 620 aa16.31■□□□□ 0.2
PLXNB3-209ENST00000538966 LRRC2Q9BYS8 371 aa16.31■□□□□ 0.2
PLXNB3-209ENST00000538966 CCDC150Q8NCX0 1101 aa16.3■□□□□ 0.2
PLXNB3-209ENST00000538966 NAA15Q9BXJ9 866 aaKnown RBP16.3■□□□□ 0.2
PLXNB3-209ENST00000538966 POTEB2H3BUK9 544 aa16.3■□□□□ 0.2
PLXNB3-209ENST00000538966 CEP63Q96MT8 703 aa16.3■□□□□ 0.2
PLXNB3-209ENST00000538966 HYPKQ9NX55 129 aa16.3■□□□□ 0.2
PLXNB3-209ENST00000538966 RBM25P49756 843 aaKnown RBP16.3■□□□□ 0.2
PLXNB3-209ENST00000538966 WDR78Q5VTH9 848 aa16.3■□□□□ 0.2
PLXNB3-209ENST00000538966 SRRTQ9BXP5 876 aaKnown RBP16.3■□□□□ 0.2
PLXNB3-209ENST00000538966 PPP1R42Q7Z4L9 355 aa16.29■□□□□ 0.2
PLXNB3-209ENST00000538966 TCP11L1Q9NUJ3 509 aa16.29■□□□□ 0.2
PLXNB3-209ENST00000538966 PTPRCP08575 1304 aa16.29■□□□□ 0.2
PLXNB3-209ENST00000538966 STAMBPO95630 424 aa16.29■□□□□ 0.2
PLXNB3-209ENST00000538966 TBC1D32Q96NH3 1257 aa16.29■□□□□ 0.2
PLXNB3-209ENST00000538966 PUF60Q9UHX1 559 aaKnown RBP16.29■□□□□ 0.2
PLXNB3-209ENST00000538966 SERPINA10Q9UK55 444 aa16.29■□□□□ 0.2
PLXNB3-209ENST00000538966 AFMP43652 599 aa16.29■□□□□ 0.2
PLXNB3-209ENST00000538966 ANO6Q4KMQ2 910 aa16.29■□□□□ 0.2
PLXNB3-209ENST00000538966 DBF4Q9UBU7 674 aaPredicted RBP16.29■□□□□ 0.2
PLXNB3-209ENST00000538966 TMX3Q96JJ7 454 aa16.29■□□□□ 0.2
PLXNB3-209ENST00000538966 TCEANC2Q96MN5 208 aa16.29■□□□□ 0.2
PLXNB3-209ENST00000538966 MBIPQ9NS73 344 aa16.29■□□□□ 0.2
PLXNB3-209ENST00000538966 BMP2KLQ5H9B9 411 aa16.28■□□□□ 0.2
PLXNB3-209ENST00000538966 PSMD1Q99460 953 aa16.28■□□□□ 0.2
PLXNB3-209ENST00000538966 FERMT2Q96AC1 680 aa16.28■□□□□ 0.2
PLXNB3-209ENST00000538966 LRSAM1Q6UWE0 723 aa16.28■□□□□ 0.2
PLXNB3-209ENST00000538966 TAOK3Q9H2K8 898 aa16.28■□□□□ 0.2
PLXNB3-209ENST00000538966 AMOTQ4VCS5 1084 aa16.28■□□□□ 0.2
PLXNB3-209ENST00000538966 CCDC102BQ68D86 513 aa16.28■□□□□ 0.2
PLXNB3-209ENST00000538966 KIF20AO95235 890 aa16.28■□□□□ 0.2
PLXNB3-209ENST00000538966 AMPD3Q01432 767 aa16.28■□□□□ 0.2
PLXNB3-209ENST00000538966 DRC1Q96MC2 740 aa16.28■□□□□ 0.2
PLXNB3-209ENST00000538966 TSPY2A6NKD2 308 aa16.27■□□□□ 0.2
PLXNB3-209ENST00000538966 ANXA1P04083 346 aa16.27■□□□□ 0.2
PLXNB3-209ENST00000538966 SYCP3Q8IZU3 236 aa16.27■□□□□ 0.2
PLXNB3-209ENST00000538966 KAT14Q9H8E8 782 aa16.27■□□□□ 0.2
PLXNB3-209ENST00000538966 ZSCAN22P10073 491 aaPredicted RBP16.27■□□□□ 0.2
PLXNB3-209ENST00000538966 TTLL12Q14166 644 aaPredicted RBP16.27■□□□□ 0.2
PLXNB3-209ENST00000538966 MFSD6Q6ZSS7 791 aa16.27■□□□□ 0.2
PLXNB3-209ENST00000538966 TRIM47Q96LD4 638 aa16.27■□□□□ 0.2
PLXNB3-209ENST00000538966 N4BP3O15049 544 aa16.27■□□□□ 0.2
PLXNB3-209ENST00000538966 UBASH3AP57075 661 aa16.27■□□□□ 0.2
PLXNB3-209ENST00000538966 KLHL40Q2TBA0 621 aa16.27■□□□□ 0.2
PLXNB3-209ENST00000538966 BMS1Q14692 1282 aaKnown RBP16.27■□□□□ 0.19
PLXNB3-209ENST00000538966 RPGRQ92834 1020 aaKnown RBP16.27■□□□□ 0.19
PLXNB3-209ENST00000538966 USP48Q86UV5 1035 aa16.26■□□□□ 0.19
PLXNB3-209ENST00000538966 NCOA7Q8NI08 942 aa16.26■□□□□ 0.19
PLXNB3-209ENST00000538966 DNAI2Q9GZS0 605 aa16.26■□□□□ 0.19
PLXNB3-209ENST00000538966 UBA7P41226 1012 aa16.26■□□□□ 0.19
PLXNB3-209ENST00000538966 UVSSAQ2YD98 709 aa16.26■□□□□ 0.19
PLXNB3-209ENST00000538966 RRAGBQ5VZM2 374 aa16.26■□□□□ 0.19
PLXNB3-209ENST00000538966 DDX46Q7L014 1031 aaKnown RBP16.26■□□□□ 0.19
PLXNB3-209ENST00000538966 FAM114A1Q8IWE2 563 aa16.26■□□□□ 0.19
PLXNB3-209ENST00000538966 UBE3BQ7Z3V4 1068 aa16.26■□□□□ 0.19
PLXNB3-209ENST00000538966 BRF1Q92994 677 aa16.26■□□□□ 0.19
PLXNB3-209ENST00000538966 HSF2BPO75031 334 aa16.26■□□□□ 0.19
PLXNB3-209ENST00000538966 SYKP43405 635 aa16.26■□□□□ 0.19
PLXNB3-209ENST00000538966 LDHAL6AQ6ZMR3 332 aa16.26■□□□□ 0.19
PLXNB3-209ENST00000538966 SAMM50Q9Y512 469 aa16.25■□□□□ 0.19
PLXNB3-209ENST00000538966 PI4KAP2A4QPH2 592 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms