RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 PARP10Q53GL7 1025 aa29.66■■■□□ 2.34
TMEM260-202ENST00000538838 NLGN1Q8N2Q7 840 aa29.66■■■□□ 2.34
TMEM260-202ENST00000538838 SETDB2Q96T68 719 aa29.66■■■□□ 2.34
TMEM260-202ENST00000538838 CARMIL3Q8ND23 1372 aa29.66■■■□□ 2.34
TMEM260-202ENST00000538838 SUSD4Q5VX71 490 aa29.65■■■□□ 2.34
TMEM260-202ENST00000538838 IBTKQ9P2D0 1353 aaPredicted RBP29.65■■■□□ 2.34
TMEM260-202ENST00000538838 MEIS3Q99687 375 aa29.64■■■□□ 2.34
TMEM260-202ENST00000538838 DDX19BQ9UMR2 479 aa29.64■■■□□ 2.34
TMEM260-202ENST00000538838 LAMB2P55268 1798 aa29.64■■■□□ 2.34
TMEM260-202ENST00000538838 TM4SF1P30408 202 aa29.63■■■□□ 2.33
TMEM260-202ENST00000538838 SLC16A10Q8TF71 515 aa29.63■■■□□ 2.33
TMEM260-202ENST00000538838 NRXN2Q9P2S2 1712 aa29.63■■■□□ 2.33
TMEM260-202ENST00000538838 DDX60Q8IY21 1712 aaKnown RBP29.63■■■□□ 2.33
TMEM260-202ENST00000538838 DDR1Q08345 913 aa29.63■■■□□ 2.33
TMEM260-202ENST00000538838 JARID2Q92833 1246 aaPredicted RBP29.63■■■□□ 2.33
TMEM260-202ENST00000538838 USP44Q9H0E7 712 aa29.63■■■□□ 2.33
TMEM260-202ENST00000538838 C9orf78Q9NZ63 289 aaPredicted RBP29.63■■■□□ 2.33
TMEM260-202ENST00000538838 GRM8O00222 908 aa29.62■■■□□ 2.33
TMEM260-202ENST00000538838 NTSR2O95665 410 aa29.62■■■□□ 2.33
TMEM260-202ENST00000538838 NEFLP07196 543 aa29.62■■■□□ 2.33
TMEM260-202ENST00000538838 EXOC6Q8TAG9 804 aa29.62■■■□□ 2.33
TMEM260-202ENST00000538838 ZBTB7AO95365 584 aa29.61■■■□□ 2.33
TMEM260-202ENST00000538838 RTL5Q5HYW3 569 aaPredicted RBP29.61■■■□□ 2.33
TMEM260-202ENST00000538838 ZBTB7BO15156 539 aaPredicted RBP29.6■■■□□ 2.33
TMEM260-202ENST00000538838 MMP10P09238 476 aa29.6■■■□□ 2.33
TMEM260-202ENST00000538838 NBPF7P0C2Y1 421 aaPredicted RBP29.6■■■□□ 2.33
TMEM260-202ENST00000538838 UBE3BQ7Z3V4 1068 aa29.6■■■□□ 2.33
TMEM260-202ENST00000538838 PPP1R42Q7Z4L9 355 aa29.6■■■□□ 2.33
TMEM260-202ENST00000538838 UTP14AQ9BVJ6 771 aaKnown RBP29.6■■■□□ 2.33
TMEM260-202ENST00000538838 TRMT112Q9UI30 125 aaKnown RBP29.6■■■□□ 2.33
TMEM260-202ENST00000538838 POLRMTO00411 1230 aaKnown RBP29.6■■■□□ 2.33
TMEM260-202ENST00000538838 FAM89AQ96GI7 184 aa29.6■■■□□ 2.33
TMEM260-202ENST00000538838 PCCAP05165 728 aaPredicted RBP29.59■■■□□ 2.33
TMEM260-202ENST00000538838 NBPF5PQ86XG9 351 aaPredicted RBP29.59■■■□□ 2.33
TMEM260-202ENST00000538838 UTYO14607 1347 aa29.58■■■□□ 2.33
TMEM260-202ENST00000538838 MYH3P11055 1940 aa29.58■■■□□ 2.33
TMEM260-202ENST00000538838 H7C1W4 665 aa29.58■■■□□ 2.33
TMEM260-202ENST00000538838 SYNE4Q8N205 404 aa29.58■■■□□ 2.33
TMEM260-202ENST00000538838 ZBTB38Q8NAP3 1195 aaPredicted RBP29.58■■■□□ 2.33
TMEM260-202ENST00000538838 CASP7P55210 303 aa29.57■■■□□ 2.32
TMEM260-202ENST00000538838 NUTM1Q86Y26 1132 aa29.57■■■□□ 2.32
TMEM260-202ENST00000538838 SERPINB2P05120 415 aa29.56■■■□□ 2.32
TMEM260-202ENST00000538838 UBTFL1P0CB47 393 aaPredicted RBP29.56■■■□□ 2.32
TMEM260-202ENST00000538838 MTFR1LQ9H019 292 aa29.56■■■□□ 2.32
TMEM260-202ENST00000538838 SH3TC1Q8TE82 1336 aa29.56■■■□□ 2.32
TMEM260-202ENST00000538838 TNRC6CQ9HCJ0 1690 aaKnown RBP29.56■■■□□ 2.32
TMEM260-202ENST00000538838 GNAI3P08754 354 aa29.56■■■□□ 2.32
TMEM260-202ENST00000538838 NYXQ9GZU5 481 aa29.56■■■□□ 2.32
TMEM260-202ENST00000538838 ABCC12Q96J65 1359 aa29.55■■■□□ 2.32
TMEM260-202ENST00000538838 C1orf115Q9H7X2 142 aa29.55■■■□□ 2.32
TMEM260-202ENST00000538838 ZBTB40Q9NUA8 1239 aa29.55■■■□□ 2.32
TMEM260-202ENST00000538838 ERFEQ4G0M1 354 aa29.54■■■□□ 2.32
TMEM260-202ENST00000538838 CNBD1Q8NA66 436 aa29.54■■■□□ 2.32
TMEM260-202ENST00000538838 ATF5Q9Y2D1 282 aaPredicted RBP29.54■■■□□ 2.32
TMEM260-202ENST00000538838 PARP3Q9Y6F1 533 aa29.54■■■□□ 2.32
TMEM260-202ENST00000538838 ANKRD31Q8N7Z5 1873 aa29.54■■■□□ 2.32
TMEM260-202ENST00000538838 CDHR2Q9BYE9 1310 aa29.54■■■□□ 2.32
TMEM260-202ENST00000538838 CCDC24Q8N4L8 307 aa29.53■■■□□ 2.32
TMEM260-202ENST00000538838 SUCLG2Q96I99 432 aa29.53■■■□□ 2.32
TMEM260-202ENST00000538838 NPHP1O15259 732 aa29.53■■■□□ 2.32
TMEM260-202ENST00000538838 PRR5LQ6MZQ0 368 aa29.53■■■□□ 2.32
TMEM260-202ENST00000538838 TPTE2Q6XPS3 522 aa29.53■■■□□ 2.32
TMEM260-202ENST00000538838 CHMP4BQ9H444 224 aaKnown RBP29.53■■■□□ 2.32
TMEM260-202ENST00000538838 GTF2E1P29083 439 aaPredicted RBP29.52■■■□□ 2.32
TMEM260-202ENST00000538838 LRRFIP2Q9Y608 721 aaKnown RBP29.52■■■□□ 2.32
TMEM260-202ENST00000538838 IRS4O14654 1257 aaPredicted RBP29.51■■■□□ 2.31
TMEM260-202ENST00000538838 GNAI2P04899 355 aa29.49■■■□□ 2.31
TMEM260-202ENST00000538838 HCLS1P14317 486 aaPredicted RBP29.49■■■□□ 2.31
TMEM260-202ENST00000538838 KAZALD1Q96I82 304 aa29.49■■■□□ 2.31
TMEM260-202ENST00000538838 EPHA10Q5JZY3 1008 aa29.48■■■□□ 2.31
TMEM260-202ENST00000538838 ST5P78524 1137 aa29.47■■■□□ 2.31
TMEM260-202ENST00000538838 BICC1Q9H694 974 aaKnown RBP29.47■■■□□ 2.31
TMEM260-202ENST00000538838 RIC1Q4ADV7 1423 aa29.46■■■□□ 2.31
TMEM260-202ENST00000538838 PLA2G12BQ9BX93 195 aa29.45■■■□□ 2.31
TMEM260-202ENST00000538838 POLD1P28340 1107 aa29.45■■■□□ 2.3
TMEM260-202ENST00000538838 FOXO4P98177 505 aa29.45■■■□□ 2.3
TMEM260-202ENST00000538838 SGIP1Q9BQI5 828 aa29.45■■■□□ 2.3
TMEM260-202ENST00000538838 HDAC5Q9UQL6 1122 aa29.45■■■□□ 2.3
TMEM260-202ENST00000538838 COL11A2P13942 1736 aaPredicted RBP29.44■■■□□ 2.3
TMEM260-202ENST00000538838 KIF13BQ9NQT8 1826 aa29.44■■■□□ 2.3
TMEM260-202ENST00000538838 PDE8AO60658 829 aa29.44■■■□□ 2.3
TMEM260-202ENST00000538838 SLC10A5Q5PT55 438 aa29.44■■■□□ 2.3
TMEM260-202ENST00000538838 ANKRD44Q8N8A2 993 aa29.44■■■□□ 2.3
TMEM260-202ENST00000538838 C3orf67Q6ZVT6 689 aa29.43■■■□□ 2.3
TMEM260-202ENST00000538838 PTGER2P43116 358 aa29.42■■■□□ 2.3
TMEM260-202ENST00000538838 AAMPQ13685 434 aa29.42■■■□□ 2.3
TMEM260-202ENST00000538838 C10orf71Q711Q0 1435 aa29.42■■■□□ 2.3
TMEM260-202ENST00000538838 CTSWP56202 376 aa29.42■■■□□ 2.3
TMEM260-202ENST00000538838 HSP90B1P14625 803 aaKnown RBP29.41■■■□□ 2.3
TMEM260-202ENST00000538838 CEP85Q6P2H3 762 aa29.41■■■□□ 2.3
TMEM260-202ENST00000538838 PCDHB15Q9Y5E8 787 aa29.41■■■□□ 2.3
TMEM260-202ENST00000538838 RABL6Q3YEC7 729 aaPredicted RBP29.4■■■□□ 2.3
TMEM260-202ENST00000538838 LMBR1LQ6UX01 489 aa29.4■■■□□ 2.3
TMEM260-202ENST00000538838 CCDC85AQ96PX6 553 aaPredicted RBP29.4■■■□□ 2.3
TMEM260-202ENST00000538838 SPON1Q9HCB6 807 aa29.4■■■□□ 2.3
TMEM260-202ENST00000538838 TAF1P21675 1872 aa29.39■■■□□ 2.29
TMEM260-202ENST00000538838 SPEF2Q9C093 1822 aa29.39■■■□□ 2.29
TMEM260-202ENST00000538838 NLRP3Q96P20 1036 aa29.38■■■□□ 2.29
TMEM260-202ENST00000538838 TTLL11Q8NHH1 800 aa29.38■■■□□ 2.29
TMEM260-202ENST00000538838 BRIP1Q9BX63 1249 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms