RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 SLFN5Q08AF3 891 aa17.69■□□□□ 0.42
CD9-208ENST00000538834 STYK1Q6J9G0 422 aa17.69■□□□□ 0.42
CD9-208ENST00000538834 C7orf43Q8WVR3 580 aa17.69■□□□□ 0.42
CD9-208ENST00000538834 MYH16Q9H6N6 1097 aa17.69■□□□□ 0.42
CD9-208ENST00000538834 BCS1LQ9Y276 419 aa17.69■□□□□ 0.42
CD9-208ENST00000538834 ERFEQ4G0M1 354 aa17.68■□□□□ 0.42
CD9-208ENST00000538834 PELP1Q8IZL8 1130 aaKnown RBP17.68■□□□□ 0.42
CD9-208ENST00000538834 TTLL6Q8N841 843 aa17.68■□□□□ 0.42
CD9-208ENST00000538834 SNED1Q8TER0 1413 aa17.68■□□□□ 0.42
CD9-208ENST00000538834 YY1P25490 414 aa17.67■□□□□ 0.42
CD9-208ENST00000538834 HOXA10P31260 410 aaPredicted RBP17.67■□□□□ 0.42
CD9-208ENST00000538834 G2E3Q7L622 706 aa17.67■□□□□ 0.42
CD9-208ENST00000538834 PPP1R42Q7Z4L9 355 aa17.67■□□□□ 0.42
CD9-208ENST00000538834 NUTM1Q86Y26 1132 aa17.67■□□□□ 0.42
CD9-208ENST00000538834 MASTLQ96GX5 879 aa17.67■□□□□ 0.42
CD9-208ENST00000538834 WWC3Q9ULE0 1092 aa17.67■□□□□ 0.42
CD9-208ENST00000538834 E9PSI1 815 aa17.66■□□□□ 0.42
CD9-208ENST00000538834 NPR1P16066 1061 aa17.65■□□□□ 0.42
CD9-208ENST00000538834 KSR2Q6VAB6 950 aa17.65■□□□□ 0.42
CD9-208ENST00000538834 METTL22Q9BUU2 404 aaPredicted RBP17.65■□□□□ 0.42
CD9-208ENST00000538834 UTP14AQ9BVJ6 771 aaKnown RBP17.65■□□□□ 0.42
CD9-208ENST00000538834 FAM177BA6PVY3 158 aa17.64■□□□□ 0.41
CD9-208ENST00000538834 SLC4A2P04920 1241 aa17.64■□□□□ 0.41
CD9-208ENST00000538834 C3orf67Q6ZVT6 689 aa17.64■□□□□ 0.41
CD9-208ENST00000538834 CNKSR1Q969H4 720 aa17.64■□□□□ 0.41
CD9-208ENST00000538834 CDCA7LQ96GN5 454 aa17.64■□□□□ 0.41
CD9-208ENST00000538834 PRELPP51888 382 aa17.63■□□□□ 0.41
CD9-208ENST00000538834 SYNE4Q8N205 404 aa17.63■□□□□ 0.41
CD9-208ENST00000538834 STK31Q9BXU1 1019 aa17.63■□□□□ 0.41
CD9-208ENST00000538834 LRRC37AA6NMS7 1700 aa17.63■□□□□ 0.41
CD9-208ENST00000538834 PI4KAP2A4QPH2 592 aa17.62■□□□□ 0.41
CD9-208ENST00000538834 IGKV5-2P06315 115 aa17.62■□□□□ 0.41
CD9-208ENST00000538834 RIC3Q7Z5B4 369 aa17.62■□□□□ 0.41
CD9-208ENST00000538834 PI4KAP1Q8N8J0 262 aa17.62■□□□□ 0.41
CD9-208ENST00000538834 CCDC191Q8NCU4 936 aa17.62■□□□□ 0.41
CD9-208ENST00000538834 ATP5J2-PTCD1G3V325 749 aa17.61■□□□□ 0.41
CD9-208ENST00000538834 NFKBIEO00221 500 aa17.61■□□□□ 0.41
CD9-208ENST00000538834 TCERG1O14776 1098 aaKnown RBP17.61■□□□□ 0.41
CD9-208ENST00000538834 DDX58O95786 925 aaKnown RBP17.61■□□□□ 0.41
CD9-208ENST00000538834 FLIIQ13045 1269 aa17.61■□□□□ 0.41
CD9-208ENST00000538834 PRPF40BQ6NWY9 871 aaKnown RBP17.61■□□□□ 0.41
CD9-208ENST00000538834 ZNF622Q969S3 477 aaKnown RBP eCLIP17.61■□□□□ 0.41
CD9-208ENST00000538834 CRAMP1Q96RY5 1269 aa17.61■□□□□ 0.41
CD9-208ENST00000538834 SH3TC1Q8TE82 1336 aa17.61■□□□□ 0.41
CD9-208ENST00000538834 LTBP3Q9NS15 1303 aa17.61■□□□□ 0.41
CD9-208ENST00000538834 COL4A1P02462 1669 aa17.61■□□□□ 0.41
CD9-208ENST00000538834 TIAM2Q8IVF5 1701 aa17.61■□□□□ 0.41
CD9-208ENST00000538834 ARHGAP27Q6ZUM4 889 aa17.6■□□□□ 0.41
CD9-208ENST00000538834 ZNF784Q8NCA9 323 aaPredicted RBP17.6■□□□□ 0.41
CD9-208ENST00000538834 ZNF428Q96B54 188 aa17.6■□□□□ 0.41
CD9-208ENST00000538834 TRMT112Q9UI30 125 aaKnown RBP17.6■□□□□ 0.41
CD9-208ENST00000538834 MAP3K2Q9Y2U5 619 aa17.6■□□□□ 0.41
CD9-208ENST00000538834 NPHP1O15259 732 aa17.59■□□□□ 0.41
CD9-208ENST00000538834 GTF2E1P29083 439 aaPredicted RBP17.59■□□□□ 0.41
CD9-208ENST00000538834 ALDH1B1P30837 517 aa17.59■□□□□ 0.41
CD9-208ENST00000538834 SF3B3Q15393 1217 aaKnown RBP17.59■□□□□ 0.41
CD9-208ENST00000538834 ZBTB38Q8NAP3 1195 aaPredicted RBP17.59■□□□□ 0.41
CD9-208ENST00000538834 NLRP3Q96P20 1036 aa17.59■□□□□ 0.41
CD9-208ENST00000538834 LTBP1Q14766 1721 aa17.58■□□□□ 0.41
CD9-208ENST00000538834 PCCAP05165 728 aaPredicted RBP17.58■□□□□ 0.4
CD9-208ENST00000538834 MYD88Q99836 296 aa17.58■□□□□ 0.4
CD9-208ENST00000538834 C21orf2O43822 256 aa17.57■□□□□ 0.4
CD9-208ENST00000538834 FAM89AQ96GI7 184 aa17.57■□□□□ 0.4
CD9-208ENST00000538834 CDHR2Q9BYE9 1310 aa17.56■□□□□ 0.4
CD9-208ENST00000538834 NEURL1BA8MQ27 555 aa17.56■□□□□ 0.4
CD9-208ENST00000538834 CT47B1P0C2W7 299 aaPredicted RBP17.56■□□□□ 0.4
CD9-208ENST00000538834 HCLS1P14317 486 aaPredicted RBP17.56■□□□□ 0.4
CD9-208ENST00000538834 BRPF1P55201 1214 aaPredicted RBP17.56■□□□□ 0.4
CD9-208ENST00000538834 MRPL50Q8N5N7 158 aaKnown RBP17.56■□□□□ 0.4
CD9-208ENST00000538834 H7C1W4 665 aa17.55■□□□□ 0.4
CD9-208ENST00000538834 CASP7P55210 303 aa17.55■□□□□ 0.4
CD9-208ENST00000538834 SOGA3Q5TF21 947 aa17.55■□□□□ 0.4
CD9-208ENST00000538834 DNAAF4Q8WXU2 420 aa17.55■□□□□ 0.4
CD9-208ENST00000538834 CWC25Q9NXE8 425 aaPredicted RBP17.55■□□□□ 0.4
CD9-208ENST00000538834 ZC3H4Q9UPT8 1303 aaKnown RBP17.54■□□□□ 0.4
CD9-208ENST00000538834 RASSF7Q02833 373 aa17.54■□□□□ 0.4
CD9-208ENST00000538834 ALDH1L2Q3SY69 923 aa17.54■□□□□ 0.4
CD9-208ENST00000538834 C9orf131Q5VYM1 1079 aa17.54■□□□□ 0.4
CD9-208ENST00000538834 LINS1Q8NG48 757 aa17.54■□□□□ 0.4
CD9-208ENST00000538834 ABCC4O15439 1325 aa17.53■□□□□ 0.4
CD9-208ENST00000538834 IRS4O14654 1257 aaPredicted RBP17.53■□□□□ 0.4
CD9-208ENST00000538834 LMNB1P20700 586 aa17.53■□□□□ 0.4
CD9-208ENST00000538834 FKBP5Q13451 457 aaPredicted RBP17.53■□□□□ 0.4
CD9-208ENST00000538834 CWF19L2Q2TBE0 894 aaKnown RBP17.53■□□□□ 0.4
CD9-208ENST00000538834 BEND3Q5T5X7 828 aa17.53■□□□□ 0.4
CD9-208ENST00000538834 CC2D2BQ6DHV5 1058 aa17.53■□□□□ 0.4
CD9-208ENST00000538834 OLFM4Q6UX06 510 aa17.53■□□□□ 0.4
CD9-208ENST00000538834 SSH1Q8WYL5 1049 aa17.53■□□□□ 0.4
CD9-208ENST00000538834 RPGRQ92834 1020 aaKnown RBP17.53■□□□□ 0.4
CD9-208ENST00000538834 RBM17Q96I25 401 aaKnown RBP17.53■□□□□ 0.4
CD9-208ENST00000538834 SPEF2Q9C093 1822 aa17.53■□□□□ 0.4
CD9-208ENST00000538834 GCKRQ14397 625 aa17.52■□□□□ 0.4
CD9-208ENST00000538834 CCDC93Q567U6 631 aa17.52■□□□□ 0.4
CD9-208ENST00000538834 PLA2G12BQ9BX93 195 aa17.52■□□□□ 0.4
CD9-208ENST00000538834 BBOX1O75936 387 aa17.51■□□□□ 0.39
CD9-208ENST00000538834 GRIPAP1Q4V328 841 aa17.51■□□□□ 0.39
CD9-208ENST00000538834 SLC51AQ86UW1 340 aa17.51■□□□□ 0.39
CD9-208ENST00000538834 RTKN2Q8IZC4 609 aa17.51■□□□□ 0.39
CD9-208ENST00000538834 PSMD1Q99460 953 aa17.51■□□□□ 0.39
CD9-208ENST00000538834 DUOX1Q9NRD9 1551 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms