RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 ZKSCAN5Q9Y2L8 839 aa14.35□□□□□ -0.11
CPNE8-203ENST00000538596 NDUFB9Q9Y6M9 179 aa14.35□□□□□ -0.11
CPNE8-203ENST00000538596 PHRF1Q9P1Y6 1649 aaKnown RBP14.34□□□□□ -0.11
CPNE8-203ENST00000538596 ZNF790Q6PG37 636 aa14.34□□□□□ -0.11
CPNE8-203ENST00000538596 TMEM87AQ8NBN3 555 aa14.34□□□□□ -0.11
CPNE8-203ENST00000538596 TPCN1Q9ULQ1 816 aa14.34□□□□□ -0.11
CPNE8-203ENST00000538596 MTMR6Q9Y217 621 aa14.34□□□□□ -0.11
CPNE8-203ENST00000538596 NCAPD2Q15021 1401 aa14.34□□□□□ -0.11
CPNE8-203ENST00000538596 VPS37CA5D8V6 355 aaPredicted RBP14.34□□□□□ -0.11
CPNE8-203ENST00000538596 DDX58O95786 925 aaKnown RBP14.34□□□□□ -0.11
CPNE8-203ENST00000538596 CHGBP05060 677 aa14.34□□□□□ -0.11
CPNE8-203ENST00000538596 XAGE3Q8WTP9 111 aa14.34□□□□□ -0.11
CPNE8-203ENST00000538596 COPS6Q7L5N1 327 aa14.33□□□□□ -0.11
CPNE8-203ENST00000538596 MYD88Q99836 296 aa14.33□□□□□ -0.11
CPNE8-203ENST00000538596 FSD1Q9BTV5 496 aa14.33□□□□□ -0.11
CPNE8-203ENST00000538596 NLRP2Q9NX02 1062 aa14.33□□□□□ -0.11
CPNE8-203ENST00000538596 R3HCC1Q9Y3T6 440 aaKnown RBP14.33□□□□□ -0.11
CPNE8-203ENST00000538596 HCLS1P14317 486 aaPredicted RBP14.33□□□□□ -0.12
CPNE8-203ENST00000538596 ZNF589Q86UQ0 364 aaPredicted RBP14.33□□□□□ -0.12
CPNE8-203ENST00000538596 UTYO14607 1347 aa14.33□□□□□ -0.12
CPNE8-203ENST00000538596 ERBB3P21860 1342 aa14.33□□□□□ -0.12
CPNE8-203ENST00000538596 NEURL1BA8MQ27 555 aa14.32□□□□□ -0.12
CPNE8-203ENST00000538596 SLC27A2O14975 620 aa14.32□□□□□ -0.12
CPNE8-203ENST00000538596 ZNF500O60304 480 aaPredicted RBP14.32□□□□□ -0.12
CPNE8-203ENST00000538596 ZKSCAN1P17029 563 aaPredicted RBP14.32□□□□□ -0.12
CPNE8-203ENST00000538596 CCDC183Q5T5S1 534 aa14.32□□□□□ -0.12
CPNE8-203ENST00000538596 MAP4K1Q92918 833 aa14.32□□□□□ -0.12
CPNE8-203ENST00000538596 KCNB2Q92953 911 aa14.32□□□□□ -0.12
CPNE8-203ENST00000538596 USP25Q9UHP3 1055 aa14.32□□□□□ -0.12
CPNE8-203ENST00000538596 SLIT3O75094 1523 aa14.32□□□□□ -0.12
CPNE8-203ENST00000538596 PHF14O94880 888 aa14.32□□□□□ -0.12
CPNE8-203ENST00000538596 PTMAP06454 111 aaKnown RBP14.32□□□□□ -0.12
CPNE8-203ENST00000538596 UBE2HP62256 183 aa14.32□□□□□ -0.12
CPNE8-203ENST00000538596 FAM173BQ6P4H8 233 aa14.32□□□□□ -0.12
CPNE8-203ENST00000538596 FERMT3Q86UX7 667 aa14.32□□□□□ -0.12
CPNE8-203ENST00000538596 PROSER2Q86WR7 435 aaPredicted RBP14.32□□□□□ -0.12
CPNE8-203ENST00000538596 ZNF496Q96IT1 587 aaPredicted RBP14.32□□□□□ -0.12
CPNE8-203ENST00000538596 CCDC39Q9UFE4 941 aa14.32□□□□□ -0.12
CPNE8-203ENST00000538596 SIPA1L3O60292 1781 aaPredicted RBP14.32□□□□□ -0.12
CPNE8-203ENST00000538596 GIMAP6Q6P9H5 292 aa14.32□□□□□ -0.12
CPNE8-203ENST00000538596 ZNF830Q96NB3 372 aaPredicted RBP14.32□□□□□ -0.12
CPNE8-203ENST00000538596 TM6SF1Q9BZW5 370 aa14.32□□□□□ -0.12
CPNE8-203ENST00000538596 USP16Q9Y5T5 823 aa14.32□□□□□ -0.12
CPNE8-203ENST00000538596 GCKRQ14397 625 aa14.31□□□□□ -0.12
CPNE8-203ENST00000538596 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.31□□□□□ -0.12
CPNE8-203ENST00000538596 SLC52A2Q9HAB3 445 aa14.31□□□□□ -0.12
CPNE8-203ENST00000538596 KDM6AO15550 1401 aaPredicted RBP14.31□□□□□ -0.12
CPNE8-203ENST00000538596 HSP90AA2PQ14568 343 aaPredicted RBP14.31□□□□□ -0.12
CPNE8-203ENST00000538596 RAPGEF4Q8WZA2 1011 aa14.31□□□□□ -0.12
CPNE8-203ENST00000538596 OVOS2A0A0G2JMS6 1433 aa14.3□□□□□ -0.12
CPNE8-203ENST00000538596 C5P01031 1676 aa14.3□□□□□ -0.12
CPNE8-203ENST00000538596 KDM4FA0A1W2PPD8 638 aa14.3□□□□□ -0.12
CPNE8-203ENST00000538596 LARP1Q6PKG0 1096 aaKnown RBP14.3□□□□□ -0.12
CPNE8-203ENST00000538596 HDAC5Q9UQL6 1122 aa14.3□□□□□ -0.12
CPNE8-203ENST00000538596 CHMP3Q9Y3E7 222 aa14.3□□□□□ -0.12
CPNE8-203ENST00000538596 CCDC9Q9Y3X0 531 aaKnown RBP14.3□□□□□ -0.12
CPNE8-203ENST00000538596 NPHP3Q7Z494 1330 aa14.3□□□□□ -0.12
CPNE8-203ENST00000538596 STK3Q13188 491 aa14.3□□□□□ -0.12
CPNE8-203ENST00000538596 CABLES1Q8TDN4 633 aa14.3□□□□□ -0.12
CPNE8-203ENST00000538596 SH2B1Q9NRF2 756 aaPredicted RBP14.3□□□□□ -0.12
CPNE8-203ENST00000538596 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.3□□□□□ -0.12
CPNE8-203ENST00000538596 ATP5J2-PTCD1G3V325 749 aa14.29□□□□□ -0.12
CPNE8-203ENST00000538596 PTCD1O75127 700 aaKnown RBP14.29□□□□□ -0.12
CPNE8-203ENST00000538596 TPM2P07951 284 aa14.29□□□□□ -0.12
CPNE8-203ENST00000538596 NEXNQ0ZGT2 675 aa14.29□□□□□ -0.12
CPNE8-203ENST00000538596 CDC37L1Q7L3B6 337 aa14.29□□□□□ -0.12
CPNE8-203ENST00000538596 ZSCAN31Q96LW9 406 aaPredicted RBP14.29□□□□□ -0.12
CPNE8-203ENST00000538596 LARP1BQ659C4 914 aaKnown RBP14.29□□□□□ -0.12
CPNE8-203ENST00000538596 ATP6V1DQ9Y5K8 247 aa14.29□□□□□ -0.12
CPNE8-203ENST00000538596 PHKG2P15735 406 aa14.28□□□□□ -0.12
CPNE8-203ENST00000538596 METTL22Q9BUU2 404 aaPredicted RBP14.28□□□□□ -0.12
CPNE8-203ENST00000538596 TFCP2Q12800 502 aa14.28□□□□□ -0.12
CPNE8-203ENST00000538596 CHRNA2Q15822 529 aa14.28□□□□□ -0.12
CPNE8-203ENST00000538596 ANKRD13DQ6ZTN6 518 aa14.28□□□□□ -0.12
CPNE8-203ENST00000538596 UBE3BQ7Z3V4 1068 aa14.28□□□□□ -0.12
CPNE8-203ENST00000538596 DBNLQ9UJU6 430 aaKnown RBP14.28□□□□□ -0.12
CPNE8-203ENST00000538596 COL15A1P39059 1388 aa14.28□□□□□ -0.12
CPNE8-203ENST00000538596 PLCB2Q00722 1185 aa14.28□□□□□ -0.12
CPNE8-203ENST00000538596 BLOC1S2Q6QNY1 142 aa14.28□□□□□ -0.12
CPNE8-203ENST00000538596 CCDC129Q6ZRS4 1044 aa14.28□□□□□ -0.12
CPNE8-203ENST00000538596 SEC62Q99442 399 aaKnown RBP14.28□□□□□ -0.12
CPNE8-203ENST00000538596 HIP1O00291 1037 aa14.27□□□□□ -0.12
CPNE8-203ENST00000538596 ADCY5O95622 1261 aa14.27□□□□□ -0.12
CPNE8-203ENST00000538596 TOB2Q14106 344 aaPredicted RBP14.27□□□□□ -0.12
CPNE8-203ENST00000538596 MED23Q9ULK4 1368 aa14.27□□□□□ -0.13
CPNE8-203ENST00000538596 TRPM3Q9HCF6 1732 aaPredicted RBP14.27□□□□□ -0.13
CPNE8-203ENST00000538596 MEGF6O75095 1541 aa14.27□□□□□ -0.13
CPNE8-203ENST00000538596 RBM10P98175 930 aaKnown RBP14.27□□□□□ -0.13
CPNE8-203ENST00000538596 PTPN12Q05209 780 aaKnown RBP14.27□□□□□ -0.13
CPNE8-203ENST00000538596 LRP10Q7Z4F1 713 aa14.27□□□□□ -0.13
CPNE8-203ENST00000538596 CAMTA1Q9Y6Y1 1673 aa14.26□□□□□ -0.13
CPNE8-203ENST00000538596 CSB-PGBD3P0DP91 1061 aa14.26□□□□□ -0.13
CPNE8-203ENST00000538596 TTC6Q86TZ1 520 aa14.26□□□□□ -0.13
CPNE8-203ENST00000538596 DNAJC2Q99543 621 aaKnown RBP14.26□□□□□ -0.13
CPNE8-203ENST00000538596 TAF5LO75529 589 aa14.26□□□□□ -0.13
CPNE8-203ENST00000538596 TATP17735 454 aaPredicted RBP14.26□□□□□ -0.13
CPNE8-203ENST00000538596 RPS6KB1P23443 525 aa14.26□□□□□ -0.13
CPNE8-203ENST00000538596 PSMA5P28066 241 aa14.26□□□□□ -0.13
CPNE8-203ENST00000538596 RFX5P48382 616 aaPredicted RBP14.26□□□□□ -0.13
CPNE8-203ENST00000538596 SLFNL1Q499Z3 407 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms