RNA–Protein interactions for RNA: ENST00000538494.1

SP140-212, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 629 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-212ENST00000538494 HIRIP3Q9BW71 556 aaPredicted RBP8.16□□□□□ -1.1
SP140-212ENST00000538494 SENP2Q9HC62 589 aa8.16□□□□□ -1.1
SP140-212ENST00000538494 KIAA1210Q9ULL0 1709 aa8.16□□□□□ -1.1
SP140-212ENST00000538494 PDE4DIPQ5VU43 2346 aa8.15□□□□□ -1.1
SP140-212ENST00000538494 KAT6BQ8WYB5 2073 aa8.15□□□□□ -1.1
SP140-212ENST00000538494 CCDC7Q96M83 1385 aa8.15□□□□□ -1.1
SP140-212ENST00000538494 IGSF1Q8N6C5 1336 aa8.15□□□□□ -1.1
SP140-212ENST00000538494 HIC1Q14526 733 aa8.15□□□□□ -1.1
SP140-212ENST00000538494 RGL3Q3MIN7 710 aa8.15□□□□□ -1.1
SP140-212ENST00000538494 NLRP7Q8WX94 980 aa8.15□□□□□ -1.1
SP140-212ENST00000538494 ACSBG1Q96GR2 724 aa8.15□□□□□ -1.1
SP140-212ENST00000538494 TRIM47Q96LD4 638 aa8.15□□□□□ -1.1
SP140-212ENST00000538494 LY75O60449 1722 aa8.15□□□□□ -1.11
SP140-212ENST00000538494 MINK1Q8N4C8 1332 aaPredicted RBP8.14□□□□□ -1.11
SP140-212ENST00000538494 SLC24A1O60721 1099 aa8.14□□□□□ -1.11
SP140-212ENST00000538494 MLLT1Q03111 559 aaPredicted RBP8.14□□□□□ -1.11
SP140-212ENST00000538494 ARHGEF25Q86VW2 580 aa8.14□□□□□ -1.11
SP140-212ENST00000538494 MRGPRX2Q96LB1 330 aa8.14□□□□□ -1.11
SP140-212ENST00000538494 SALL2Q9Y467 1007 aaPredicted RBP8.14□□□□□ -1.11
SP140-212ENST00000538494 SEMA3EO15041 775 aa8.13□□□□□ -1.11
SP140-212ENST00000538494 GCGRP47871 477 aa8.13□□□□□ -1.11
SP140-212ENST00000538494 TRIM32Q13049 653 aa8.13□□□□□ -1.11
SP140-212ENST00000538494 RNF19BQ6ZMZ0 732 aa8.13□□□□□ -1.11
SP140-212ENST00000538494 SMC1BQ8NDV3 1235 aa8.13□□□□□ -1.11
SP140-212ENST00000538494 PPIP5K1Q6PFW1 1433 aa8.12□□□□□ -1.11
SP140-212ENST00000538494 QRICH2Q9H0J4 1663 aa8.12□□□□□ -1.11
SP140-212ENST00000538494 FOXN1O15353 648 aa8.12□□□□□ -1.11
SP140-212ENST00000538494 MSS51Q4VC12 460 aa8.12□□□□□ -1.11
SP140-212ENST00000538494 HPS1Q92902 700 aa8.12□□□□□ -1.11
SP140-212ENST00000538494 ABHD8Q96I13 439 aa8.12□□□□□ -1.11
SP140-212ENST00000538494 PLEKHG2Q9H7P9 1386 aa8.11□□□□□ -1.11
SP140-212ENST00000538494 C16orf71Q8IYS4 520 aaPredicted RBP8.11□□□□□ -1.11
SP140-212ENST00000538494 FLAD1Q8NFF5 587 aa8.11□□□□□ -1.11
SP140-212ENST00000538494 TRAK1Q9UPV9 953 aa8.11□□□□□ -1.11
SP140-212ENST00000538494 CPSF1Q10570 1443 aaKnown RBP8.11□□□□□ -1.11
SP140-212ENST00000538494 KCNQ4P56696 695 aa8.1□□□□□ -1.11
SP140-212ENST00000538494 SULF1Q8IWU6 871 aa8.1□□□□□ -1.11
SP140-212ENST00000538494 KIFC2Q96AC6 838 aa8.1□□□□□ -1.11
SP140-212ENST00000538494 KIF13BQ9NQT8 1826 aa8.1□□□□□ -1.11
SP140-212ENST00000538494 RGPD5Q99666 1765 aa8.1□□□□□ -1.11
SP140-212ENST00000538494 NSD2O96028 1365 aa8.1□□□□□ -1.11
SP140-212ENST00000538494 KIAA1551Q9HCM1 1747 aa8.09□□□□□ -1.11
SP140-212ENST00000538494 HMGB2P26583 209 aaKnown RBP8.09□□□□□ -1.11
SP140-212ENST00000538494 MSL1Q68DK7 614 aa8.09□□□□□ -1.11
SP140-212ENST00000538494 CDK19Q9BWU1 502 aa8.09□□□□□ -1.11
SP140-212ENST00000538494 USP54Q70EL1 1684 aa8.08□□□□□ -1.12
SP140-212ENST00000538494 TNRC6CQ9HCJ0 1690 aaKnown RBP8.08□□□□□ -1.12
SP140-212ENST00000538494 KDM2BQ8NHM5 1336 aa8.08□□□□□ -1.12
SP140-212ENST00000538494 FAM181BA6NEQ2 426 aa8.08□□□□□ -1.12
SP140-212ENST00000538494 GNPATO15228 680 aa8.08□□□□□ -1.12
SP140-212ENST00000538494 IL2RBP14784 551 aa8.08□□□□□ -1.12
SP140-212ENST00000538494 CTCFP49711 727 aaPredicted RBP8.08□□□□□ -1.12
SP140-212ENST00000538494 TGFB2P61812 414 aa8.08□□□□□ -1.12
SP140-212ENST00000538494 GRIPAP1Q4V328 841 aa8.08□□□□□ -1.12
SP140-212ENST00000538494 RBM26Q5T8P6 1007 aaKnown RBP8.08□□□□□ -1.12
SP140-212ENST00000538494 RRAGCQ9HB90 399 aa8.08□□□□□ -1.12
SP140-212ENST00000538494 PIK3C2AO00443 1686 aa8.08□□□□□ -1.12
SP140-212ENST00000538494 C9orf131Q5VYM1 1079 aa8.07□□□□□ -1.12
SP140-212ENST00000538494 REPIN1Q9BWE0 567 aaKnown RBP8.07□□□□□ -1.12
SP140-212ENST00000538494 KCPQ6ZWJ8 1503 aa8.07□□□□□ -1.12
SP140-212ENST00000538494 ANKRD36BQ8N2N9 1353 aa8.07□□□□□ -1.12
SP140-212ENST00000538494 BRCA1P38398 1863 aaKnown RBP8.06□□□□□ -1.12
SP140-212ENST00000538494 MMP16P51512 607 aa8.06□□□□□ -1.12
SP140-212ENST00000538494 Q3C1V9 767 aa8.06□□□□□ -1.12
SP140-212ENST00000538494 RC3H1Q5TC82 1133 aaKnown RBP8.06□□□□□ -1.12
SP140-212ENST00000538494 CCDC24Q8N4L8 307 aa8.06□□□□□ -1.12
SP140-212ENST00000538494 KCNH5Q8NCM2 988 aa8.06□□□□□ -1.12
SP140-212ENST00000538494 CCNL1Q9UK58 526 aaPredicted RBP8.06□□□□□ -1.12
SP140-212ENST00000538494 SBF1O95248 1867 aa8.06□□□□□ -1.12
SP140-212ENST00000538494 ZC3H4Q9UPT8 1303 aaKnown RBP8.05□□□□□ -1.12
SP140-212ENST00000538494 PHOX2BQ99453 314 aa8.05□□□□□ -1.12
SP140-212ENST00000538494 PKD1L3Q7Z443 1732 aa8.05□□□□□ -1.12
SP140-212ENST00000538494 ARFGEF1Q9Y6D6 1849 aa8.05□□□□□ -1.12
SP140-212ENST00000538494 TAF1LQ8IZX4 1826 aa8.04□□□□□ -1.12
SP140-212ENST00000538494 LOC105371045A0A1W2PR82 267 aa8.04□□□□□ -1.12
SP140-212ENST00000538494 VEGFAP15692 232 aaPredicted RBP8.04□□□□□ -1.12
SP140-212ENST00000538494 KCNA3P22001 575 aa8.04□□□□□ -1.12
SP140-212ENST00000538494 GMPRP36959 345 aa8.04□□□□□ -1.12
SP140-212ENST00000538494 ARHGAP27Q6ZUM4 889 aa8.04□□□□□ -1.12
SP140-212ENST00000538494 AMIGO3Q86WK7 504 aa8.04□□□□□ -1.12
SP140-212ENST00000538494 NXF1Q9UBU9 619 aaKnown RBP8.04□□□□□ -1.12
SP140-212ENST00000538494 CNTNAP1P78357 1384 aa8.04□□□□□ -1.12
SP140-212ENST00000538494 KDM6AO15550 1401 aaPredicted RBP8.03□□□□□ -1.12
SP140-212ENST00000538494 NFAT5O94916 1531 aa8.03□□□□□ -1.12
SP140-212ENST00000538494 VIRMAQ69YN4 1812 aaKnown RBP8.03□□□□□ -1.12
SP140-212ENST00000538494 ALDH1A1P00352 501 aa8.03□□□□□ -1.12
SP140-212ENST00000538494 CSB-PGBD3P0DP91 1061 aa8.03□□□□□ -1.12
SP140-212ENST00000538494 ITGAEP38570 1179 aa8.03□□□□□ -1.12
SP140-212ENST00000538494 LBX1P52954 281 aa8.03□□□□□ -1.12
SP140-212ENST00000538494 SKOR1P84550 965 aa8.03□□□□□ -1.12
SP140-212ENST00000538494 ZSCAN1Q8NBB4 408 aa8.03□□□□□ -1.12
SP140-212ENST00000538494 USB1Q9BQ65 265 aaKnown RBP8.03□□□□□ -1.12
SP140-212ENST00000538494 BCS1LQ9Y276 419 aa8.03□□□□□ -1.12
SP140-212ENST00000538494 TOGARAM1Q9Y4F4 1720 aa8.03□□□□□ -1.12
SP140-212ENST00000538494 UBR3Q6ZT12 1888 aa8.02□□□□□ -1.12
SP140-212ENST00000538494 GLTPD2A6NH11 291 aa8.02□□□□□ -1.13
SP140-212ENST00000538494 DXOO77932 396 aaKnown RBP8.02□□□□□ -1.13
SP140-212ENST00000538494 HSPA8P11142 646 aaKnown RBP8.02□□□□□ -1.13
SP140-212ENST00000538494 DCAF5Q96JK2 942 aa8.02□□□□□ -1.13
SP140-212ENST00000538494 N4BP2Q86UW6 1770 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms