RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 TNS2Q63HR2 1409 aa13.81□□□□□ -0.2
SLC28A1-204ENST00000538177 RASEFQ8IZ41 740 aa13.81□□□□□ -0.2
SLC28A1-204ENST00000538177 JARID2Q92833 1246 aaPredicted RBP13.81□□□□□ -0.2
SLC28A1-204ENST00000538177 KCNB2Q92953 911 aa13.81□□□□□ -0.2
SLC28A1-204ENST00000538177 SNRKQ9NRH2 765 aa13.81□□□□□ -0.2
SLC28A1-204ENST00000538177 STRN4Q9NRL3 753 aa13.81□□□□□ -0.2
SLC28A1-204ENST00000538177 TTC14Q96N46 770 aa13.8□□□□□ -0.2
SLC28A1-204ENST00000538177 PAPPAQ13219 1627 aa13.8□□□□□ -0.2
SLC28A1-204ENST00000538177 NHSL1Q5SYE7 1610 aa13.8□□□□□ -0.2
SLC28A1-204ENST00000538177 A1BGP04217 495 aa13.79□□□□□ -0.2
SLC28A1-204ENST00000538177 TTLL7Q6ZT98 887 aa13.79□□□□□ -0.2
SLC28A1-204ENST00000538177 AFDNP55196 1824 aaKnown RBP13.79□□□□□ -0.2
SLC28A1-204ENST00000538177 SHANK3Q9BYB0 1731 aa13.79□□□□□ -0.2
SLC28A1-204ENST00000538177 XRCC6P12956 609 aaKnown RBP eCLIP13.79□□□□□ -0.2
SLC28A1-204ENST00000538177 PTH1RQ03431 593 aa13.79□□□□□ -0.2
SLC28A1-204ENST00000538177 KLHL40Q2TBA0 621 aa13.79□□□□□ -0.2
SLC28A1-204ENST00000538177 FOXO4P98177 505 aa13.78□□□□□ -0.2
SLC28A1-204ENST00000538177 BOLA2Q9H3K6 86 aa13.78□□□□□ -0.2
SLC28A1-204ENST00000538177 CWC25Q9NXE8 425 aaPredicted RBP13.78□□□□□ -0.2
SLC28A1-204ENST00000538177 BRD1O95696 1058 aa13.78□□□□□ -0.2
SLC28A1-204ENST00000538177 ATP5JP18859 108 aa13.78□□□□□ -0.2
SLC28A1-204ENST00000538177 TNNI3KQ59H18 835 aa13.78□□□□□ -0.2
SLC28A1-204ENST00000538177 MCTP1Q6DN14 999 aa13.78□□□□□ -0.2
SLC28A1-204ENST00000538177 TM6SF1Q9BZW5 370 aa13.78□□□□□ -0.2
SLC28A1-204ENST00000538177 LMBRD1Q9NUN5 540 aa13.78□□□□□ -0.2
SLC28A1-204ENST00000538177 FPGT-TNNI3KV9GXZ4 949 aa13.78□□□□□ -0.2
SLC28A1-204ENST00000538177 MRE11P49959 708 aa13.77□□□□□ -0.21
SLC28A1-204ENST00000538177 TFCP2Q12800 502 aa13.77□□□□□ -0.21
SLC28A1-204ENST00000538177 NMIQ13287 307 aaPredicted RBP13.77□□□□□ -0.21
SLC28A1-204ENST00000538177 NECTIN1Q15223 517 aa13.77□□□□□ -0.21
SLC28A1-204ENST00000538177 LMBR1LQ6UX01 489 aa13.77□□□□□ -0.21
SLC28A1-204ENST00000538177 CCDC191Q8NCU4 936 aa13.77□□□□□ -0.21
SLC28A1-204ENST00000538177 DBNLQ9UJU6 430 aaKnown RBP13.77□□□□□ -0.21
SLC28A1-204ENST00000538177 CCDC171Q6TFL3 1326 aa13.77□□□□□ -0.21
SLC28A1-204ENST00000538177 NOL8Q76FK4 1167 aaKnown RBP13.76□□□□□ -0.21
SLC28A1-204ENST00000538177 MAP4K1Q92918 833 aa13.76□□□□□ -0.21
SLC28A1-204ENST00000538177 FAM227BQ96M60 508 aa13.76□□□□□ -0.21
SLC28A1-204ENST00000538177 DDX49Q9Y6V7 483 aaKnown RBP13.76□□□□□ -0.21
SLC28A1-204ENST00000538177 TMOD3Q9NYL9 352 aa13.76□□□□□ -0.21
SLC28A1-204ENST00000538177 NUP188Q5SRE5 1749 aa13.76□□□□□ -0.21
SLC28A1-204ENST00000538177 AK2P54819 239 aa13.75□□□□□ -0.21
SLC28A1-204ENST00000538177 PRPF40BQ6NWY9 871 aaKnown RBP13.75□□□□□ -0.21
SLC28A1-204ENST00000538177 FSD1Q9BTV5 496 aa13.75□□□□□ -0.21
SLC28A1-204ENST00000538177 LIMCH1Q9UPQ0 1083 aa13.75□□□□□ -0.21
SLC28A1-204ENST00000538177 VSIG10Q8N0Z9 540 aa13.75□□□□□ -0.21
SLC28A1-204ENST00000538177 TEX13AQ9BXU3 409 aaPredicted RBP13.75□□□□□ -0.21
SLC28A1-204ENST00000538177 ZSWIM6Q9HCJ5 1215 aa13.75□□□□□ -0.21
SLC28A1-204ENST00000538177 MED23Q9ULK4 1368 aa13.74□□□□□ -0.21
SLC28A1-204ENST00000538177 RUFY3Q7L099 469 aa13.74□□□□□ -0.21
SLC28A1-204ENST00000538177 ZBTB3Q9H5J0 574 aa13.74□□□□□ -0.21
SLC28A1-204ENST00000538177 RBM8AQ9Y5S9 174 aaKnown RBP13.74□□□□□ -0.21
SLC28A1-204ENST00000538177 TOGARAM1Q9Y4F4 1720 aa13.74□□□□□ -0.21
SLC28A1-204ENST00000538177 A0A0D9SFI3 127 aa13.73□□□□□ -0.21
SLC28A1-204ENST00000538177 CASTP20810 708 aaKnown RBP13.73□□□□□ -0.21
SLC28A1-204ENST00000538177 VPS53Q5VIR6 699 aa13.73□□□□□ -0.21
SLC28A1-204ENST00000538177 CREB3L3Q68CJ9 461 aa13.73□□□□□ -0.21
SLC28A1-204ENST00000538177 PIGBQ92521 554 aa13.73□□□□□ -0.21
SLC28A1-204ENST00000538177 ISCA1Q9BUE6 129 aa13.73□□□□□ -0.21
SLC28A1-204ENST00000538177 GRPEL1Q9HAV7 217 aa13.73□□□□□ -0.21
SLC28A1-204ENST00000538177 GPR108Q9NPR9 543 aa13.73□□□□□ -0.21
SLC28A1-204ENST00000538177 BTG4Q9NY30 223 aa13.73□□□□□ -0.21
SLC28A1-204ENST00000538177 RFX7Q2KHR2 1363 aa13.73□□□□□ -0.21
SLC28A1-204ENST00000538177 ZKSCAN1P17029 563 aaPredicted RBP13.73□□□□□ -0.21
SLC28A1-204ENST00000538177 TRIM28Q13263 835 aaKnown RBP13.73□□□□□ -0.21
SLC28A1-204ENST00000538177 ADCK5Q3MIX3 580 aa13.73□□□□□ -0.21
SLC28A1-204ENST00000538177 ATG9AQ7Z3C6 839 aa13.73□□□□□ -0.21
SLC28A1-204ENST00000538177 GAS2L3Q86XJ1 694 aa13.73□□□□□ -0.21
SLC28A1-204ENST00000538177 JAKMIP1Q96N16 626 aaKnown RBP13.73□□□□□ -0.21
SLC28A1-204ENST00000538177 DBNDD2Q9BQY9 259 aa13.73□□□□□ -0.21
SLC28A1-204ENST00000538177 ATG3Q9NT62 314 aa13.73□□□□□ -0.21
SLC28A1-204ENST00000538177 JCADQ9P266 1359 aa13.73□□□□□ -0.21
SLC28A1-204ENST00000538177 TCIRG1Q13488 830 aa13.72□□□□□ -0.21
SLC28A1-204ENST00000538177 HAUS7Q99871 368 aa13.72□□□□□ -0.21
SLC28A1-204ENST00000538177 PDRG1Q9NUG6 133 aa13.72□□□□□ -0.21
SLC28A1-204ENST00000538177 CYP46A1Q9Y6A2 500 aa13.72□□□□□ -0.21
SLC28A1-204ENST00000538177 TJP1Q07157 1748 aa13.72□□□□□ -0.21
SLC28A1-204ENST00000538177 DISP2A7MBM2 1401 aa13.72□□□□□ -0.21
SLC28A1-204ENST00000538177 SLC27A2O14975 620 aa13.72□□□□□ -0.21
SLC28A1-204ENST00000538177 PRPF40AO75400 957 aaKnown RBP13.72□□□□□ -0.21
SLC28A1-204ENST00000538177 IL15P40933 162 aaPredicted RBP13.72□□□□□ -0.21
SLC28A1-204ENST00000538177 ASAP1Q9ULH1 1129 aa13.72□□□□□ -0.21
SLC28A1-204ENST00000538177 WDR33Q9C0J8 1336 aaKnown RBP13.71□□□□□ -0.21
SLC28A1-204ENST00000538177 CPA1P15085 419 aa13.71□□□□□ -0.21
SLC28A1-204ENST00000538177 EDC3Q96F86 508 aaKnown RBP13.71□□□□□ -0.21
SLC28A1-204ENST00000538177 ZSCAN31Q96LW9 406 aaPredicted RBP13.71□□□□□ -0.21
SLC28A1-204ENST00000538177 ARXQ96QS3 562 aa13.71□□□□□ -0.21
SLC28A1-204ENST00000538177 CHMP3Q9Y3E7 222 aa13.71□□□□□ -0.21
SLC28A1-204ENST00000538177 CIAO1O76071 339 aa13.71□□□□□ -0.22
SLC28A1-204ENST00000538177 KCNJ4P48050 445 aa13.71□□□□□ -0.22
SLC28A1-204ENST00000538177 TSGA10IPQ3SY00 556 aa13.71□□□□□ -0.22
SLC28A1-204ENST00000538177 DNAJC10Q8IXB1 793 aa13.71□□□□□ -0.22
SLC28A1-204ENST00000538177 PANK2Q9BZ23 570 aa13.71□□□□□ -0.22
SLC28A1-204ENST00000538177 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.71□□□□□ -0.22
SLC28A1-204ENST00000538177 RPAP1Q9BWH6 1393 aaPredicted RBP13.7□□□□□ -0.22
SLC28A1-204ENST00000538177 EYA2O00167 538 aa13.7□□□□□ -0.22
SLC28A1-204ENST00000538177 TAF5LO75529 589 aa13.7□□□□□ -0.22
SLC28A1-204ENST00000538177 STARD3NLO95772 234 aa13.7□□□□□ -0.22
SLC28A1-204ENST00000538177 PSMA5P28066 241 aa13.7□□□□□ -0.22
SLC28A1-204ENST00000538177 ZNF445P59923 1031 aa13.7□□□□□ -0.22
SLC28A1-204ENST00000538177 RNF20Q5VTR2 975 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms