RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 NCOA3Q9Y6Q9 1424 aa8.87□□□□□ -0.99
MSH6-209ENST00000538136 KIAA1211Q6ZU35 1233 aa8.87□□□□□ -0.99
MSH6-209ENST00000538136 FSD1Q9BTV5 496 aa8.87□□□□□ -0.99
MSH6-209ENST00000538136 UPF2Q9HAU5 1272 aaKnown RBP8.87□□□□□ -0.99
MSH6-209ENST00000538136 TBC1D9Q6ZT07 1266 aa8.87□□□□□ -0.99
MSH6-209ENST00000538136 PROM2Q8N271 834 aa8.87□□□□□ -0.99
MSH6-209ENST00000538136 LINS1Q8NG48 757 aa8.87□□□□□ -0.99
MSH6-209ENST00000538136 PLBD2Q8NHP8 589 aa8.87□□□□□ -0.99
MSH6-209ENST00000538136 GYG1P46976 350 aa8.86□□□□□ -0.99
MSH6-209ENST00000538136 CAVIN4Q5BKX8 364 aa8.86□□□□□ -0.99
MSH6-209ENST00000538136 SUCLG2Q96I99 432 aa8.86□□□□□ -0.99
MSH6-209ENST00000538136 RPS8P62241 208 aaKnown RBP8.86□□□□□ -0.99
MSH6-209ENST00000538136 GTF2IP78347 998 aa8.86□□□□□ -0.99
MSH6-209ENST00000538136 TCP10Q12799 353 aa8.86□□□□□ -0.99
MSH6-209ENST00000538136 IKQ13123 557 aaPredicted RBP8.86□□□□□ -0.99
MSH6-209ENST00000538136 DALRD3Q5D0E6 543 aaKnown RBP8.86□□□□□ -0.99
MSH6-209ENST00000538136 NLGN2Q8NFZ4 835 aa8.86□□□□□ -0.99
MSH6-209ENST00000538136 GPATCH3Q96I76 525 aa8.86□□□□□ -0.99
MSH6-209ENST00000538136 COL5A2P05997 1499 aaPredicted RBP8.86□□□□□ -0.99
MSH6-209ENST00000538136 IFIT1P09914 478 aaKnown RBP8.86□□□□□ -0.99
MSH6-209ENST00000538136 IL6STP40189 918 aaPredicted RBP8.86□□□□□ -0.99
MSH6-209ENST00000538136 CCDC158Q5M9N0 1113 aa8.86□□□□□ -0.99
MSH6-209ENST00000538136 HEG1Q9ULI3 1381 aa8.86□□□□□ -0.99
MSH6-209ENST00000538136 SETBP1Q9Y6X0 1596 aa8.86□□□□□ -0.99
MSH6-209ENST00000538136 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.86□□□□□ -0.99
MSH6-209ENST00000538136 QRICH2Q9H0J4 1663 aa8.85□□□□□ -0.99
MSH6-209ENST00000538136 TRPM1Q7Z4N2 1603 aa8.85□□□□□ -0.99
MSH6-209ENST00000538136 USP31Q70CQ4 1352 aa8.85□□□□□ -0.99
MSH6-209ENST00000538136 HTATSF1O43719 755 aaKnown RBP8.85□□□□□ -0.99
MSH6-209ENST00000538136 FOSBP53539 338 aa8.85□□□□□ -0.99
MSH6-209ENST00000538136 OGFOD1Q8N543 542 aa8.85□□□□□ -0.99
MSH6-209ENST00000538136 MPNDQ8N594 471 aa8.85□□□□□ -0.99
MSH6-209ENST00000538136 MRPL50Q8N5N7 158 aaKnown RBP8.85□□□□□ -0.99
MSH6-209ENST00000538136 NYXQ9GZU5 481 aa8.85□□□□□ -0.99
MSH6-209ENST00000538136 ROBO1Q9Y6N7 1651 aa8.85□□□□□ -0.99
MSH6-209ENST00000538136 SOCS7O14512 581 aa8.85□□□□□ -0.99
MSH6-209ENST00000538136 HSP90B1P14625 803 aaKnown RBP8.85□□□□□ -0.99
MSH6-209ENST00000538136 PRAMEF18Q5VWM3 479 aa8.85□□□□□ -0.99
MSH6-209ENST00000538136 DZIP1Q86YF9 867 aaKnown RBP8.85□□□□□ -0.99
MSH6-209ENST00000538136 MIGA1Q8NAN2 632 aa8.85□□□□□ -0.99
MSH6-209ENST00000538136 FLAD1Q8NFF5 587 aa8.85□□□□□ -0.99
MSH6-209ENST00000538136 MAP3K15Q6ZN16 1313 aa8.85□□□□□ -0.99
MSH6-209ENST00000538136 MINDY4BA8MYZ0 360 aa8.85□□□□□ -0.99
MSH6-209ENST00000538136 FOXD4L6Q3SYB3 417 aaPredicted RBP8.85□□□□□ -0.99
MSH6-209ENST00000538136 LRRC24Q50LG9 513 aa8.85□□□□□ -0.99
MSH6-209ENST00000538136 FOXD4L3Q6VB84 417 aaPredicted RBP8.85□□□□□ -0.99
MSH6-209ENST00000538136 GIGYF2Q6Y7W6 1299 aaKnown RBP8.85□□□□□ -0.99
MSH6-209ENST00000538136 TTLL6Q8N841 843 aa8.85□□□□□ -0.99
MSH6-209ENST00000538136 CELF1Q92879 486 aaKnown RBP8.85□□□□□ -0.99
MSH6-209ENST00000538136 METTL22Q9BUU2 404 aaPredicted RBP8.85□□□□□ -0.99
MSH6-209ENST00000538136 DIAPH3Q9NSV4 1193 aa8.85□□□□□ -0.99
MSH6-209ENST00000538136 PIM2Q9P1W9 311 aa8.85□□□□□ -0.99
MSH6-209ENST00000538136 BLMP54132 1417 aaPredicted RBP8.85□□□□□ -0.99
MSH6-209ENST00000538136 GOLIM4O00461 696 aa8.85□□□□□ -0.99
MSH6-209ENST00000538136 GCKRQ14397 625 aa8.85□□□□□ -0.99
MSH6-209ENST00000538136 EDC3Q96F86 508 aaKnown RBP8.85□□□□□ -0.99
MSH6-209ENST00000538136 ZBTB12Q9Y330 459 aaPredicted RBP8.85□□□□□ -0.99
MSH6-209ENST00000538136 MVPQ14764 893 aaKnown RBP8.84□□□□□ -0.99
MSH6-209ENST00000538136 SLC51AQ86UW1 340 aa8.84□□□□□ -0.99
MSH6-209ENST00000538136 BCL9LQ86UU0 1499 aa8.84□□□□□ -0.99
MSH6-209ENST00000538136 CLRN2A0PK11 232 aa8.84□□□□□ -0.99
MSH6-209ENST00000538136 MPHOSPH10O00566 681 aaKnown RBP8.84□□□□□ -0.99
MSH6-209ENST00000538136 DTNBO60941 627 aa8.84□□□□□ -0.99
MSH6-209ENST00000538136 CWC22Q9HCG8 908 aaKnown RBP8.84□□□□□ -0.99
MSH6-209ENST00000538136 ANO2Q9NQ90 1003 aa8.84□□□□□ -0.99
MSH6-209ENST00000538136 PPP4R2Q9NY27 417 aa8.84□□□□□ -0.99
MSH6-209ENST00000538136 NARFQ9UHQ1 456 aa8.84□□□□□ -0.99
MSH6-209ENST00000538136 LRP6O75581 1613 aa8.84□□□□□ -0.99
MSH6-209ENST00000538136 KDM5AP29375 1690 aaKnown RBP8.84□□□□□ -0.99
MSH6-209ENST00000538136 GYS1P13807 737 aa8.84□□□□□ -0.99
MSH6-209ENST00000538136 NLRP10Q86W26 655 aa8.84□□□□□ -0.99
MSH6-209ENST00000538136 CHMP4BP1P59074 171 aa8.83□□□□□ -1
MSH6-209ENST00000538136 SLC27A3Q5K4L6 730 aa8.83□□□□□ -1
MSH6-209ENST00000538136 FOXD4L5Q5VV16 416 aaPredicted RBP8.83□□□□□ -1
MSH6-209ENST00000538136 FOXD4L4Q8WXT5 416 aaPredicted RBP8.83□□□□□ -1
MSH6-209ENST00000538136 RBM17Q96I25 401 aaKnown RBP8.83□□□□□ -1
MSH6-209ENST00000538136 GNL3LQ9NVN8 582 aaKnown RBP8.83□□□□□ -1
MSH6-209ENST00000538136 PNMA6EA0A0J9YXQ4 647 aa8.83□□□□□ -1
MSH6-209ENST00000538136 NEURL1BA8MQ27 555 aa8.83□□□□□ -1
MSH6-209ENST00000538136 PDE6BP35913 854 aa8.83□□□□□ -1
MSH6-209ENST00000538136 TFCP2Q12800 502 aa8.83□□□□□ -1
MSH6-209ENST00000538136 ATP2B3Q16720 1220 aa8.83□□□□□ -1
MSH6-209ENST00000538136 COL15A1P39059 1388 aa8.83□□□□□ -1
MSH6-209ENST00000538136 WTIPA6NIX2 430 aaPredicted RBP8.83□□□□□ -1
MSH6-209ENST00000538136 CACNB3P54284 484 aa8.83□□□□□ -1
MSH6-209ENST00000538136 RASSF7Q02833 373 aa8.83□□□□□ -1
MSH6-209ENST00000538136 VPS53Q5VIR6 699 aa8.83□□□□□ -1
MSH6-209ENST00000538136 AOC3Q16853 763 aa8.82□□□□□ -1
MSH6-209ENST00000538136 DPY19L2Q6NUT2 758 aa8.82□□□□□ -1
MSH6-209ENST00000538136 CASC1Q6TDU7 716 aa8.82□□□□□ -1
MSH6-209ENST00000538136 CCAR1Q8IX12 1150 aaKnown RBP8.82□□□□□ -1
MSH6-209ENST00000538136 DDRGK1Q96HY6 314 aa8.82□□□□□ -1
MSH6-209ENST00000538136 MXD3Q9BW11 206 aa8.82□□□□□ -1
MSH6-209ENST00000538136 CPDO75976 1380 aa8.82□□□□□ -1
MSH6-209ENST00000538136 CD163L1Q9NR16 1453 aa8.82□□□□□ -1
MSH6-209ENST00000538136 PRR5LQ6MZQ0 368 aa8.82□□□□□ -1
MSH6-209ENST00000538136 INTS5Q6P9B9 1019 aaKnown RBP8.82□□□□□ -1
MSH6-209ENST00000538136 PI16Q6UXB8 463 aa8.82□□□□□ -1
MSH6-209ENST00000538136 RTL1A6NKG5 1358 aa8.82□□□□□ -1
MSH6-209ENST00000538136 PDE4DIPQ5VU43 2346 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms