RNA–Protein interactions for RNA: ENST00000537392.1

PMFBP1-206, Transcript of polyamine modulated factor 1 binding protein 1, humanhuman

TSL 2

Gene PMFBP1, Length 2,038 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1-206ENST00000537392 CCNL1Q9UK58 526 aaPredicted RBP11.68□□□□□ -0.54
PMFBP1-206ENST00000537392 SALL3Q9BXA9 1300 aa11.68□□□□□ -0.54
PMFBP1-206ENST00000537392 CAMTA2O94983 1202 aa11.67□□□□□ -0.54
PMFBP1-206ENST00000537392 PCCAP05165 728 aaPredicted RBP11.67□□□□□ -0.54
PMFBP1-206ENST00000537392 FBXO41Q8TF61 875 aa11.67□□□□□ -0.54
PMFBP1-206ENST00000537392 KIF1BPQ96EK5 621 aa11.67□□□□□ -0.54
PMFBP1-206ENST00000537392 LY75O60449 1722 aa11.67□□□□□ -0.54
PMFBP1-206ENST00000537392 RFX5P48382 616 aaPredicted RBP11.67□□□□□ -0.54
PMFBP1-206ENST00000537392 RC3H1Q5TC82 1133 aaKnown RBP11.67□□□□□ -0.54
PMFBP1-206ENST00000537392 LMBR1LQ6UX01 489 aa11.67□□□□□ -0.54
PMFBP1-206ENST00000537392 ZNF34Q8IZ26 560 aa11.67□□□□□ -0.54
PMFBP1-206ENST00000537392 ZBTB38Q8NAP3 1195 aaPredicted RBP11.67□□□□□ -0.54
PMFBP1-206ENST00000537392 IL1RAPL2Q9NP60 686 aa11.67□□□□□ -0.54
PMFBP1-206ENST00000537392 GSPT1P15170 499 aaKnown RBP11.66□□□□□ -0.54
PMFBP1-206ENST00000537392 TTC22Q5TAA0 569 aa11.66□□□□□ -0.54
PMFBP1-206ENST00000537392 OSBPL3Q9H4L5 887 aa11.66□□□□□ -0.54
PMFBP1-206ENST00000537392 ANKRD36CQ5JPF3 1778 aa11.66□□□□□ -0.54
PMFBP1-206ENST00000537392 UBN2Q6ZU65 1347 aa11.66□□□□□ -0.54
PMFBP1-206ENST00000537392 PDE1AP54750 535 aa11.65□□□□□ -0.54
PMFBP1-206ENST00000537392 OS9Q13438 667 aaPredicted RBP11.65□□□□□ -0.54
PMFBP1-206ENST00000537392 KLHDC4Q8TBB5 520 aa11.65□□□□□ -0.54
PMFBP1-206ENST00000537392 FAM89AQ96GI7 184 aa11.65□□□□□ -0.54
PMFBP1-206ENST00000537392 COPRSQ9NQ92 184 aa11.65□□□□□ -0.54
PMFBP1-206ENST00000537392 TRIM37O94972 964 aa11.65□□□□□ -0.54
PMFBP1-206ENST00000537392 SEC24BO95487 1268 aa11.65□□□□□ -0.54
PMFBP1-206ENST00000537392 RXRBP28702 533 aa11.65□□□□□ -0.54
PMFBP1-206ENST00000537392 PTPN12Q05209 780 aaKnown RBP11.65□□□□□ -0.54
PMFBP1-206ENST00000537392 ERC1Q8IUD2 1116 aa11.65□□□□□ -0.54
PMFBP1-206ENST00000537392 PLA2G12BQ9BX93 195 aa11.65□□□□□ -0.54
PMFBP1-206ENST00000537392 RGS17Q9UGC6 210 aaPredicted RBP11.65□□□□□ -0.54
PMFBP1-206ENST00000537392 NUP98P52948 1817 aa11.65□□□□□ -0.54
PMFBP1-206ENST00000537392 CDHR2Q9BYE9 1310 aa11.64□□□□□ -0.55
PMFBP1-206ENST00000537392 EP400Q96L91 3159 aa11.64□□□□□ -0.55
PMFBP1-206ENST00000537392 RPS6KA4O75676 772 aa11.64□□□□□ -0.55
PMFBP1-206ENST00000537392 SASH1O94885 1247 aa11.64□□□□□ -0.55
PMFBP1-206ENST00000537392 MX1P20591 662 aa11.64□□□□□ -0.55
PMFBP1-206ENST00000537392 G3BP1Q13283 466 aaKnown RBP eCLIP11.64□□□□□ -0.55
PMFBP1-206ENST00000537392 SYNE4Q8N205 404 aa11.64□□□□□ -0.55
PMFBP1-206ENST00000537392 SIL1Q9H173 461 aa11.64□□□□□ -0.55
PMFBP1-206ENST00000537392 RTN4Q9NQC3 1192 aaKnown RBP11.64□□□□□ -0.55
PMFBP1-206ENST00000537392 SMIM5Q71RC9 77 aa11.64□□□□□ -0.55
PMFBP1-206ENST00000537392 LRRC4BQ9NT99 713 aa11.64□□□□□ -0.55
PMFBP1-206ENST00000537392 STAP2Q9UGK3 403 aa11.64□□□□□ -0.55
PMFBP1-206ENST00000537392 TRMT112Q9UI30 125 aaKnown RBP11.64□□□□□ -0.55
PMFBP1-206ENST00000537392 GNPATO15228 680 aa11.63□□□□□ -0.55
PMFBP1-206ENST00000537392 TSHZ3Q63HK5 1081 aa11.63□□□□□ -0.55
PMFBP1-206ENST00000537392 NUTM1Q86Y26 1132 aa11.63□□□□□ -0.55
PMFBP1-206ENST00000537392 CHMP3Q9Y3E7 222 aa11.63□□□□□ -0.55
PMFBP1-206ENST00000537392 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.63□□□□□ -0.55
PMFBP1-206ENST00000537392 BCORQ6W2J9 1755 aa11.63□□□□□ -0.55
PMFBP1-206ENST00000537392 SUSD4Q5VX71 490 aa11.62□□□□□ -0.55
PMFBP1-206ENST00000537392 CLEC4GQ6UXB4 293 aa11.62□□□□□ -0.55
PMFBP1-206ENST00000537392 AMIGO3Q86WK7 504 aa11.62□□□□□ -0.55
PMFBP1-206ENST00000537392 ZNF652Q9Y2D9 606 aa11.62□□□□□ -0.55
PMFBP1-206ENST00000537392 TAF1LQ8IZX4 1826 aa11.62□□□□□ -0.55
PMFBP1-206ENST00000537392 IRS4O14654 1257 aaPredicted RBP11.62□□□□□ -0.55
PMFBP1-206ENST00000537392 RGL2O15211 777 aa11.62□□□□□ -0.55
PMFBP1-206ENST00000537392 CSF1RP07333 972 aa11.62□□□□□ -0.55
PMFBP1-206ENST00000537392 PARP10Q53GL7 1025 aa11.62□□□□□ -0.55
PMFBP1-206ENST00000537392 POTEAQ6S8J7 498 aa11.62□□□□□ -0.55
PMFBP1-206ENST00000537392 CLASRPQ8N2M8 674 aaKnown RBP11.62□□□□□ -0.55
PMFBP1-206ENST00000537392 NIP7Q9Y221 180 aaKnown RBP eCLIP11.62□□□□□ -0.55
PMFBP1-206ENST00000537392 RTCBQ9Y3I0 505 aaKnown RBP11.62□□□□□ -0.55
PMFBP1-206ENST00000537392 C4BP0C0L5 1744 aa11.62□□□□□ -0.55
PMFBP1-206ENST00000537392 AOX1Q06278 1338 aa11.61□□□□□ -0.55
PMFBP1-206ENST00000537392 SDSP20132 328 aa11.61□□□□□ -0.55
PMFBP1-206ENST00000537392 UTP14AQ9BVJ6 771 aaKnown RBP11.61□□□□□ -0.55
PMFBP1-206ENST00000537392 BCL2L12Q9HB09 334 aa11.61□□□□□ -0.55
PMFBP1-206ENST00000537392 NARFQ9UHQ1 456 aa11.61□□□□□ -0.55
PMFBP1-206ENST00000537392 SLC27A3Q5K4L6 730 aa11.6□□□□□ -0.55
PMFBP1-206ENST00000537392 SCN7AQ01118 1682 aa11.6□□□□□ -0.55
PMFBP1-206ENST00000537392 USP42Q9H9J4 1324 aaKnown RBP11.6□□□□□ -0.55
PMFBP1-206ENST00000537392 FAM177BA6PVY3 158 aa11.6□□□□□ -0.55
PMFBP1-206ENST00000537392 PDE8AO60658 829 aa11.6□□□□□ -0.55
PMFBP1-206ENST00000537392 CDC45O75419 566 aa11.6□□□□□ -0.55
PMFBP1-206ENST00000537392 NTSR2O95665 410 aa11.6□□□□□ -0.55
PMFBP1-206ENST00000537392 CTSWP56202 376 aa11.6□□□□□ -0.55
PMFBP1-206ENST00000537392 USPL1Q5W0Q7 1092 aa11.6□□□□□ -0.55
PMFBP1-206ENST00000537392 TBC1D9Q6ZT07 1266 aa11.6□□□□□ -0.55
PMFBP1-206ENST00000537392 TTLL11Q8NHH1 800 aa11.6□□□□□ -0.55
PMFBP1-206ENST00000537392 PI4K2BQ8TCG2 481 aa11.6□□□□□ -0.55
PMFBP1-206ENST00000537392 ARHGEF1Q92888 912 aaKnown RBP11.6□□□□□ -0.55
PMFBP1-206ENST00000537392 EAF2Q96CJ1 260 aaPredicted RBP11.6□□□□□ -0.55
PMFBP1-206ENST00000537392 ZNF594Q96JF6 807 aaPredicted RBP11.6□□□□□ -0.55
PMFBP1-206ENST00000537392 AK7Q96M32 723 aa11.6□□□□□ -0.55
PMFBP1-206ENST00000537392 SRP68Q9UHB9 627 aaKnown RBP11.6□□□□□ -0.55
PMFBP1-206ENST00000537392 SH3TC1Q8TE82 1336 aa11.6□□□□□ -0.55
PMFBP1-206ENST00000537392 IFIT2P09913 472 aaKnown RBP11.59□□□□□ -0.55
PMFBP1-206ENST00000537392 TFCP2Q12800 502 aa11.59□□□□□ -0.55
PMFBP1-206ENST00000537392 CCDC57Q2TAC2 916 aa11.59□□□□□ -0.55
PMFBP1-206ENST00000537392 ATG9AQ7Z3C6 839 aa11.59□□□□□ -0.55
PMFBP1-206ENST00000537392 AACSQ86V21 672 aa11.59□□□□□ -0.55
PMFBP1-206ENST00000537392 CCDC85AQ96PX6 553 aaPredicted RBP11.59□□□□□ -0.55
PMFBP1-206ENST00000537392 ANP32AP39687 249 aaKnown RBP11.59□□□□□ -0.55
PMFBP1-206ENST00000537392 PROM2Q8N271 834 aa11.59□□□□□ -0.55
PMFBP1-206ENST00000537392 GREM2Q9H772 168 aa11.59□□□□□ -0.55
PMFBP1-206ENST00000537392 TTC41PQ6P2S7 1318 aa11.58□□□□□ -0.56
PMFBP1-206ENST00000537392 EYA2O00167 538 aa11.58□□□□□ -0.56
PMFBP1-206ENST00000537392 ZPR1O75312 459 aa11.58□□□□□ -0.56
PMFBP1-206ENST00000537392 CIAO1O76071 339 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms