RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 ZMYND10O75800 440 aa9.99□□□□□ -0.81
YBX3-206ENST00000536823 NR3C2P08235 984 aa9.99□□□□□ -0.81
YBX3-206ENST00000536823 NR5A1Q13285 461 aa9.99□□□□□ -0.81
YBX3-206ENST00000536823 FAM217BQ9NTX9 383 aaPredicted RBP9.99□□□□□ -0.81
YBX3-206ENST00000536823 GLI3P10071 1580 aa9.99□□□□□ -0.81
YBX3-206ENST00000536823 BRD4O60885 1362 aaPredicted RBP9.99□□□□□ -0.81
YBX3-206ENST00000536823 NRAPQ86VF7 1730 aa9.99□□□□□ -0.81
YBX3-206ENST00000536823 COL14A1Q05707 1796 aaKnown RBP9.98□□□□□ -0.81
YBX3-206ENST00000536823 IRF6O14896 467 aa9.98□□□□□ -0.81
YBX3-206ENST00000536823 MARSP56192 900 aaKnown RBP9.98□□□□□ -0.81
YBX3-206ENST00000536823 CARD11Q9BXL7 1154 aa9.98□□□□□ -0.81
YBX3-206ENST00000536823 GPCPD1Q9NPB8 672 aa9.98□□□□□ -0.81
YBX3-206ENST00000536823 ATAD2Q6PL18 1390 aa9.98□□□□□ -0.81
YBX3-206ENST00000536823 USP6P35125 1406 aa9.98□□□□□ -0.81
YBX3-206ENST00000536823 FAM83GA6ND36 823 aa9.97□□□□□ -0.81
YBX3-206ENST00000536823 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.97□□□□□ -0.81
YBX3-206ENST00000536823 RNFT1Q5M7Z0 435 aa9.97□□□□□ -0.81
YBX3-206ENST00000536823 PRR7Q8TB68 274 aa9.97□□□□□ -0.81
YBX3-206ENST00000536823 WHAMMQ8TF30 809 aa9.97□□□□□ -0.81
YBX3-206ENST00000536823 GJD4Q96KN9 370 aaPredicted RBP9.97□□□□□ -0.81
YBX3-206ENST00000536823 USP19O94966 1318 aa9.97□□□□□ -0.81
YBX3-206ENST00000536823 NRKQ7Z2Y5 1582 aa9.97□□□□□ -0.81
YBX3-206ENST00000536823 VPS72Q15906 364 aa9.96□□□□□ -0.82
YBX3-206ENST00000536823 FOXJ1Q92949 421 aa9.96□□□□□ -0.82
YBX3-206ENST00000536823 CLSPNQ9HAW4 1339 aa9.96□□□□□ -0.82
YBX3-206ENST00000536823 ARHGEF15O94989 841 aa9.95□□□□□ -0.82
YBX3-206ENST00000536823 CTHP32929 405 aa9.95□□□□□ -0.82
YBX3-206ENST00000536823 CLCN1P35523 988 aa9.95□□□□□ -0.82
YBX3-206ENST00000536823 PTSQ03393 145 aa9.95□□□□□ -0.82
YBX3-206ENST00000536823 BARGINQ6ZT62 677 aa9.95□□□□□ -0.82
YBX3-206ENST00000536823 NANOS1Q8WY41 292 aaKnown RBP9.95□□□□□ -0.82
YBX3-206ENST00000536823 PRDM11Q9NQV5 511 aa9.95□□□□□ -0.82
YBX3-206ENST00000536823 CABP1Q9NZU7 370 aa9.95□□□□□ -0.82
YBX3-206ENST00000536823 KIAA0232Q92628 1395 aa9.95□□□□□ -0.82
YBX3-206ENST00000536823 SSH2Q76I76 1423 aa9.95□□□□□ -0.82
YBX3-206ENST00000536823 AKAP12Q02952 1782 aa9.95□□□□□ -0.82
YBX3-206ENST00000536823 CPDO75976 1380 aa9.94□□□□□ -0.82
YBX3-206ENST00000536823 SPTLC1O15269 473 aa9.94□□□□□ -0.82
YBX3-206ENST00000536823 NUTM2GQ5VZR2 741 aa9.94□□□□□ -0.82
YBX3-206ENST00000536823 DESI1Q6ICB0 168 aa9.94□□□□□ -0.82
YBX3-206ENST00000536823 SCARF2Q96GP6 870 aaPredicted RBP9.94□□□□□ -0.82
YBX3-206ENST00000536823 BTG4Q9NY30 223 aa9.94□□□□□ -0.82
YBX3-206ENST00000536823 PIK3C2AO00443 1686 aa9.93□□□□□ -0.82
YBX3-206ENST00000536823 SLIT3O75094 1523 aa9.93□□□□□ -0.82
YBX3-206ENST00000536823 CPSF1Q10570 1443 aaKnown RBP9.93□□□□□ -0.82
YBX3-206ENST00000536823 SLURP2P0DP57 97 aa9.93□□□□□ -0.82
YBX3-206ENST00000536823 ABTB2Q8N961 1025 aa9.93□□□□□ -0.82
YBX3-206ENST00000536823 MON2Q7Z3U7 1717 aa9.93□□□□□ -0.82
YBX3-206ENST00000536823 BRWD3Q6RI45 1802 aa9.92□□□□□ -0.82
YBX3-206ENST00000536823 GRM5P41594 1212 aa9.92□□□□□ -0.82
YBX3-206ENST00000536823 NLRP13Q86W25 1043 aa9.92□□□□□ -0.82
YBX3-206ENST00000536823 TSEN34Q9BSV6 310 aaKnown RBP9.92□□□□□ -0.82
YBX3-206ENST00000536823 CCDC9Q9Y3X0 531 aaKnown RBP9.92□□□□□ -0.82
YBX3-206ENST00000536823 LMO7Q8WWI1 1683 aa9.92□□□□□ -0.82
YBX3-206ENST00000536823 TTC21AQ8NDW8 1320 aa9.91□□□□□ -0.82
YBX3-206ENST00000536823 TTLL8A6PVC2 850 aa9.91□□□□□ -0.82
YBX3-206ENST00000536823 ADAM23O75077 832 aa9.91□□□□□ -0.82
YBX3-206ENST00000536823 ZC3H6P61129 1189 aaKnown RBP9.91□□□□□ -0.82
YBX3-206ENST00000536823 MTMR2Q13614 643 aa9.91□□□□□ -0.82
YBX3-206ENST00000536823 CHRNA2Q15822 529 aa9.91□□□□□ -0.82
YBX3-206ENST00000536823 CCDC155Q8N6L0 562 aa9.91□□□□□ -0.82
YBX3-206ENST00000536823 PCGF6Q9BYE7 350 aa9.91□□□□□ -0.82
YBX3-206ENST00000536823 TIMELESSQ9UNS1 1208 aa9.91□□□□□ -0.82
YBX3-206ENST00000536823 CD163L1Q9NR16 1453 aa9.91□□□□□ -0.82
YBX3-206ENST00000536823 KTN1Q86UP2 1357 aaKnown RBP9.9□□□□□ -0.82
YBX3-206ENST00000536823 SPATA31A5Q5VU36 1347 aa9.9□□□□□ -0.82
YBX3-206ENST00000536823 TTC21BQ7Z4L5 1316 aa9.9□□□□□ -0.82
YBX3-206ENST00000536823 SPATA31A7Q8IWB4 1347 aa9.9□□□□□ -0.82
YBX3-206ENST00000536823 GCP02774 474 aa9.9□□□□□ -0.82
YBX3-206ENST00000536823 NDUFV2P19404 249 aa9.9□□□□□ -0.82
YBX3-206ENST00000536823 AGERQ15109 404 aa9.9□□□□□ -0.82
YBX3-206ENST00000536823 SEPT12Q8IYM1 358 aa9.9□□□□□ -0.82
YBX3-206ENST00000536823 CCDC102AQ96A19 550 aa9.9□□□□□ -0.82
YBX3-206ENST00000536823 PUS7Q96PZ0 661 aaKnown RBP9.9□□□□□ -0.82
YBX3-206ENST00000536823 TESK2Q96S53 571 aa9.9□□□□□ -0.82
YBX3-206ENST00000536823 THSD7AQ9UPZ6 1657 aa9.9□□□□□ -0.83
YBX3-206ENST00000536823 CAMTA1Q9Y6Y1 1673 aa9.9□□□□□ -0.83
YBX3-206ENST00000536823 USP47Q96K76 1375 aa9.89□□□□□ -0.83
YBX3-206ENST00000536823 ST20-MTHFSA0A0A6YYL1 179 aa9.89□□□□□ -0.83
YBX3-206ENST00000536823 SPDYE5A6NIY4 337 aa9.89□□□□□ -0.83
YBX3-206ENST00000536823 USP54Q70EL1 1684 aa9.89□□□□□ -0.83
YBX3-206ENST00000536823 NINLQ9Y2I6 1382 aa9.88□□□□□ -0.83
YBX3-206ENST00000536823 NFAT5O94916 1531 aa9.88□□□□□ -0.83
YBX3-206ENST00000536823 FIGNL2A6NMB9 653 aa9.88□□□□□ -0.83
YBX3-206ENST00000536823 KRI1Q8N9T8 703 aaKnown RBP9.88□□□□□ -0.83
YBX3-206ENST00000536823 SPIRE2Q8WWL2 714 aa9.88□□□□□ -0.83
YBX3-206ENST00000536823 SLC24A3Q9HC58 644 aa9.88□□□□□ -0.83
YBX3-206ENST00000536823 EDC4Q6P2E9 1401 aaKnown RBP9.88□□□□□ -0.83
YBX3-206ENST00000536823 AATKQ6ZMQ8 1374 aa9.88□□□□□ -0.83
YBX3-206ENST00000536823 SPATA31A1Q5TZJ5 1347 aa9.87□□□□□ -0.83
YBX3-206ENST00000536823 COL5A2P05997 1499 aaPredicted RBP9.87□□□□□ -0.83
YBX3-206ENST00000536823 CDC14CA4D256 554 aa9.87□□□□□ -0.83
YBX3-206ENST00000536823 MOXD2PA6NHM9 499 aa9.87□□□□□ -0.83
YBX3-206ENST00000536823 MSTNO14793 375 aa9.87□□□□□ -0.83
YBX3-206ENST00000536823 FSHRP23945 695 aa9.87□□□□□ -0.83
YBX3-206ENST00000536823 C4orf48Q5BLP8 95 aa9.87□□□□□ -0.83
YBX3-206ENST00000536823 KRT27Q7Z3Y8 459 aa9.87□□□□□ -0.83
YBX3-206ENST00000536823 KRTAP4-8Q9BYQ9 185 aa9.87□□□□□ -0.83
YBX3-206ENST00000536823 STRN4Q9NRL3 753 aa9.87□□□□□ -0.83
YBX3-206ENST00000536823 SRCAPQ6ZRS2 3230 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms